EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMODG00000004728 (Gene tree)
Gene ID
100023786
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Monodelphis_domestica
Status
putative
Strand
Minus strand
Length
41417 bases
Position
chr6:105052825-105094241
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMODP00000005824PAM2PF07145.151.3e-0611
ENSMODP00000005824GTP_EFTUPF00009.271.2e-4611
ENSMODP00000005824GTP_EFTU_D2PF03144.254.2e-0811
ENSMODP00000005824GTP_EFTU_D3PF03143.176.2e-3211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMODT00000005947-1761-ENSMODP00000005824586 (aa)-F6Y235
Gene Model
Click here to download ENSMODG00000004728's gene model file
Pathways
Pathway IDPathway NameSource
mdo03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000004728's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMODG00000004728-6535.533ENSMODG00000016868EEF1A29535.354
ENSMODG00000004728-7338.462ENSMODG00000018533-9538.462
ENSMODG00000004728-7242.757ENSMODG00000017499HBS1L6242.757
ENSMODG00000004728-8984.321ENSMODG00000023082-10085.086
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMODG00000004728-10093.174ENSG00000103342GSPT110098.196Homo_sapiens
ENSMODG00000004728-7490.575ENSAPOG00000004594-9983.532Acanthochromis_polyacanthus
ENSMODG00000004728-9979.153ENSAPOG00000002524gspt1l9678.342Acanthochromis_polyacanthus
ENSMODG00000004728-8997.328ENSAMEG00000009589GSPT110097.328Ailuropoda_melanoleuca
ENSMODG00000004728-8486.694ENSACIG00000007028-10086.694Amphilophus_citrinellus
ENSMODG00000004728-7487.586ENSACIG00000006643GSPT19982.626Amphilophus_citrinellus
ENSMODG00000004728-9979.322ENSAOCG00000016342gspt1l10085.947Amphiprion_ocellaris
ENSMODG00000004728-9976.174ENSAOCG00000020972-9677.333Amphiprion_ocellaris
ENSMODG00000004728-9979.661ENSAPEG00000010261gspt1l9678.849Amphiprion_percula
ENSMODG00000004728-7585.682ENSAPEG00000003359-9979.960Amphiprion_percula
ENSMODG00000004728-9977.835ENSATEG00000009194GSPT19677.983Anabas_testudineus
ENSMODG00000004728-9977.966ENSATEG00000007769gspt1l9676.819Anabas_testudineus
ENSMODG00000004728-8993.511ENSACAG00000003979GSPT110093.511Anolis_carolinensis
ENSMODG00000004728-9480.442ENSANAG00000036504GSPT19180.442Aotus_nancymaae
ENSMODG00000004728-9977.554ENSACLG00000017598-9677.500Astatotilapia_calliptera
ENSMODG00000004728-9978.840ENSACLG00000011643gspt1l9678.498Astatotilapia_calliptera
ENSMODG00000004728-9878.609ENSAMXG00000002781gspt1l8177.875Astyanax_mexicanus
ENSMODG00000004728-9679.930ENSAMXG00000008638gspt19479.930Astyanax_mexicanus
ENSMODG00000004728-10093.174ENSBTAG00000003577GSPT19194.178Bos_taurus
ENSMODG00000004728-10092.833ENSCJAG00000018191GSPT19193.493Callithrix_jacchus
ENSMODG00000004728-8997.505ENSCAFG00000018856GSPT19997.505Canis_familiaris
ENSMODG00000004728-9892.548ENSCAFG00020024250GSPT19396.586Canis_lupus_dingo
ENSMODG00000004728-10092.699ENSCHIG00000009274GSPT19193.664Capra_hircus
ENSMODG00000004728-8980.230ENSTSYG00000036050-8880.230Carlito_syrichta
ENSMODG00000004728-8997.889ENSTSYG00000013812-9997.889Carlito_syrichta
ENSMODG00000004728-8772.441ENSCAPG00000014454GSPT19872.441Cavia_aperea
ENSMODG00000004728-9292.565ENSCPOG00000009381GSPT19096.838Cavia_porcellus
ENSMODG00000004728-8587.500ENSCCAG00000036663-9487.500Cebus_capucinus
ENSMODG00000004728-10089.420ENSCATG00000025774GSPT19089.420Cercocebus_atys
ENSMODG00000004728-10092.177ENSCLAG00000011772GSPT19997.154Chinchilla_lanigera
ENSMODG00000004728-10092.833ENSCSAG00000008244GSPT19193.664Chlorocebus_sabaeus
ENSMODG00000004728-9970.578ENSCHOG00000003850GSPT18170.748Choloepus_hoffmanni
ENSMODG00000004728-9991.237ENSCPBG00000020430GSPT19496.169Chrysemys_picta_bellii
ENSMODG00000004728-9758.813ENSCSAVG00000010206-9957.941Ciona_savignyi
ENSMODG00000004728-8578.958ENSCANG00000035684GSPT110079.559Colobus_angolensis_palliatus
ENSMODG00000004728-10092.857ENSCGRG00001009583Gspt19998.171Cricetulus_griseus_chok1gshd
ENSMODG00000004728-10093.174ENSCGRG00000002048Gspt110098.196Cricetulus_griseus_crigri
ENSMODG00000004728-9975.793ENSCSEG00000019708GSPT19677.889Cynoglossus_semilaevis
ENSMODG00000004728-9879.094ENSCVAG00000000869GSPT19677.796Cyprinodon_variegatus
ENSMODG00000004728-9962.988ENSCVAG00000016392-9861.591Cyprinodon_variegatus
ENSMODG00000004728-9680.282ENSDARG00000031048gspt19479.754Danio_rerio
ENSMODG00000004728-9977.929ENSDARG00000098627gspt1l9676.610Danio_rerio
ENSMODG00000004728-8598.597ENSDNOG00000004608GSPT110098.597Dasypus_novemcinctus
ENSMODG00000004728-8596.994ENSDORG00000025038Gspt110096.994Dipodomys_ordii
ENSMODG00000004728-10092.833ENSETEG00000018249GSPT19293.367Echinops_telfairi
ENSMODG00000004728-10092.203ENSEASG00005011497GSPT19192.386Equus_asinus_asinus
ENSMODG00000004728-8398.351ENSECAG00000021195GSPT110098.351Equus_caballus
ENSMODG00000004728-10083.701ENSEEUG00000008851GSPT19284.418Erinaceus_europaeus
ENSMODG00000004728-9085.501ENSELUG00000019323-9774.309Esox_lucius
ENSMODG00000004728-9976.717ENSELUG00000023492gspt1l9678.608Esox_lucius
ENSMODG00000004728-10093.686ENSFCAG00000022281GSPT19193.356Felis_catus
ENSMODG00000004728-8996.169ENSFALG00000003880GSPT18596.169Ficedula_albicollis
ENSMODG00000004728-8996.154ENSFDAG00000008253GSPT110096.154Fukomys_damarensis
ENSMODG00000004728-9976.531ENSFHEG00000009090gspt1l9677.683Fundulus_heteroclitus
ENSMODG00000004728-9875.966ENSGMOG00000013056GSPT19674.752Gadus_morhua
ENSMODG00000004728-7481.982ENSGMOG00000009933-7782.175Gadus_morhua
ENSMODG00000004728-10090.476ENSGALG00000039500GSPT29489.482Gallus_gallus
ENSMODG00000004728-9978.462ENSGAFG00000005676gspt1l9677.196Gambusia_affinis
ENSMODG00000004728-7686.456ENSGAFG00000020793-9981.874Gambusia_affinis
ENSMODG00000004728-9975.472ENSGACG00000004490-9874.232Gasterosteus_aculeatus
ENSMODG00000004728-9877.873ENSGACG00000004324gspt1l9776.552Gasterosteus_aculeatus
ENSMODG00000004728-9991.897ENSGAGG00000016315GSPT19291.952Gopherus_agassizii
ENSMODG00000004728-10093.174ENSGGOG00000004071GSPT19693.836Gorilla_gorilla
ENSMODG00000004728-7492.575ENSHBUG00000006257gspt1l9992.575Haplochromis_burtoni
ENSMODG00000004728-9977.052ENSHBUG00000001538GSPT19677.500Haplochromis_burtoni
ENSMODG00000004728-10090.956ENSHGLG00000010520-9995.984Heterocephalus_glaber_female
ENSMODG00000004728-10082.253ENSHGLG00000012034-9382.253Heterocephalus_glaber_female
ENSMODG00000004728-8995.962ENSHGLG00100015621-10095.962Heterocephalus_glaber_male
ENSMODG00000004728-10080.579ENSHGLG00100010030-9980.546Heterocephalus_glaber_male
ENSMODG00000004728-9978.983ENSHCOG00000016899gspt1l9678.003Hippocampus_comes
ENSMODG00000004728-9973.782ENSHCOG00000015286GSPT19673.913Hippocampus_comes
ENSMODG00000004728-9678.697ENSIPUG00000001655Gspt19986.214Ictalurus_punctatus
ENSMODG00000004728-9976.949ENSIPUG00000011358Gspt19575.891Ictalurus_punctatus
ENSMODG00000004728-8997.692ENSSTOG00000015406GSPT110098.196Ictidomys_tridecemlineatus
ENSMODG00000004728-10093.686ENSJJAG00000015530Gspt19194.178Jaculus_jaculus
ENSMODG00000004728-7591.629ENSKMAG00000021919GSPT19677.205Kryptolebias_marmoratus
ENSMODG00000004728-9976.910ENSKMAG00000006311-9677.513Kryptolebias_marmoratus
ENSMODG00000004728-9977.133ENSLBEG00000006458gspt1l9675.809Labrus_bergylta
ENSMODG00000004728-7591.422ENSLBEG00000001128GSPT19676.833Labrus_bergylta
ENSMODG00000004728-8775.394ENSLACG00000001700GSPT19875.394Latimeria_chalumnae
ENSMODG00000004728-9982.910ENSLOCG00000007431gspt19682.173Lepisosteus_oculatus
ENSMODG00000004728-10092.857ENSLAFG00000032278GSPT19993.729Loxodonta_africana
ENSMODG00000004728-10093.003ENSMFAG00000037675GSPT19193.836Macaca_fascicularis
ENSMODG00000004728-10091.993ENSMMUG00000023178GSPT110097.996Macaca_mulatta
ENSMODG00000004728-10093.003ENSMNEG00000032993GSPT110097.996Macaca_nemestrina
ENSMODG00000004728-8997.500ENSMLEG00000028669GSPT110097.500Mandrillus_leucophaeus
ENSMODG00000004728-7284.649ENSMAMG00000004326GSPT19676.949Mastacembelus_armatus
ENSMODG00000004728-9976.780ENSMAMG00000002821gspt1l9677.496Mastacembelus_armatus
ENSMODG00000004728-9978.840ENSMZEG00005022024gspt1l9678.498Maylandia_zebra
ENSMODG00000004728-9977.387ENSMZEG00005007132-9677.333Maylandia_zebra
ENSMODG00000004728-8995.019ENSMGAG00000000878GSPT19995.019Meleagris_gallopavo
ENSMODG00000004728-7390.654ENSMAUG00000000551Gspt18989.815Mesocricetus_auratus
ENSMODG00000004728-10092.662ENSMICG00000014137GSPT19192.979Microcebus_murinus
ENSMODG00000004728-10092.869ENSMOCG00000019604Gspt19393.493Microtus_ochrogaster
ENSMODG00000004728-8892.148ENSMMOG00000009646gspt1l9885.111Mola_mola
ENSMODG00000004728-7592.045ENSMMOG00000003725GSPT19092.045Mola_mola
ENSMODG00000004728-9977.721ENSMALG00000003550-9676.910Monopterus_albus
ENSMODG00000004728-9976.471ENSMALG00000009500GSPT19677.090Monopterus_albus
ENSMODG00000004728-10093.345MGP_CAROLIEiJ_G0020458Gspt19193.664Mus_caroli
ENSMODG00000004728-10093.345ENSMUSG00000062203Gspt19193.664Mus_musculus
ENSMODG00000004728-10092.833MGP_PahariEiJ_G0016165Gspt19293.174Mus_pahari
ENSMODG00000004728-10093.345MGP_SPRETEiJ_G0021353Gspt19193.664Mus_spretus
ENSMODG00000004728-8996.768ENSMPUG00000014504GSPT19996.768Mustela_putorius_furo
ENSMODG00000004728-8997.126ENSMLUG00000000792GSPT19997.126Myotis_lucifugus
ENSMODG00000004728-10093.515ENSNGAG00000023220Gspt19193.836Nannospalax_galili
ENSMODG00000004728-9977.052ENSNBRG00000002803GSPT19677.500Neolamprologus_brichardi
ENSMODG00000004728-10093.003ENSNLEG00000010199GSPT110098.196Nomascus_leucogenys
ENSMODG00000004728-8275.424ENSMEUG00000006697-8375.424Notamacropus_eugenii
ENSMODG00000004728-9774.956ENSMEUG00000015169-8273.333Notamacropus_eugenii
ENSMODG00000004728-9987.241ENSOPRG00000014219GSPT18185.026Ochotona_princeps
ENSMODG00000004728-7383.450ENSODEG00000011524-9983.450Octodon_degus
ENSMODG00000004728-8596.169ENSODEG00000002248-10096.169Octodon_degus
ENSMODG00000004728-9977.052ENSONIG00000019754-9677.500Oreochromis_niloticus
ENSMODG00000004728-9979.145ENSONIG00000003456gspt1l9678.669Oreochromis_niloticus
ENSMODG00000004728-6698.438ENSOANG00000009409GSPT110098.438Ornithorhynchus_anatinus
ENSMODG00000004728-10093.209ENSOCUG00000004759GSPT19293.707Oryctolagus_cuniculus
ENSMODG00000004728-9877.855ENSORLG00000026597gspt1l9678.720Oryzias_latipes
ENSMODG00000004728-9976.752ENSORLG00000002867-9676.373Oryzias_latipes
ENSMODG00000004728-9877.855ENSORLG00020016364gspt1l9678.720Oryzias_latipes_hni
ENSMODG00000004728-9976.752ENSORLG00020006749-9676.373Oryzias_latipes_hni
ENSMODG00000004728-9976.962ENSORLG00015005515-9981.925Oryzias_latipes_hsok
ENSMODG00000004728-9877.682ENSORLG00015008971gspt1l9585.516Oryzias_latipes_hsok
ENSMODG00000004728-9877.835ENSOMEG00000002739gspt1l9578.276Oryzias_melastigma
ENSMODG00000004728-9977.949ENSOMEG00000008108-9981.818Oryzias_melastigma
ENSMODG00000004728-10092.230ENSOGAG00000007083GSPT19291.933Otolemur_garnettii
ENSMODG00000004728-10092.662ENSOARG00000007088GSPT19193.664Ovis_aries
ENSMODG00000004728-8997.692ENSPPRG00000005042GSPT110098.196Panthera_pardus
ENSMODG00000004728-8997.692ENSPTIG00000020265GSPT110098.196Panthera_tigris_altaica
ENSMODG00000004728-8995.393ENSPTRG00000007779-9895.393Pan_troglodytes
ENSMODG00000004728-10093.003ENSPANG00000007630GSPT19093.836Papio_anubis
ENSMODG00000004728-6473.958ENSPKIG00000020492gspt1l6073.177Paramormyrops_kingsleyae
ENSMODG00000004728-9980.375ENSPKIG00000022644gspt19680.068Paramormyrops_kingsleyae
ENSMODG00000004728-8996.360ENSPSIG00000008275GSPT110096.360Pelodiscus_sinensis
ENSMODG00000004728-9875.952ENSPMGG00000003007gspt1l9983.838Periophthalmus_magnuspinnatus
ENSMODG00000004728-7389.461ENSPMGG00000022247GSPT19675.510Periophthalmus_magnuspinnatus
ENSMODG00000004728-10094.198ENSPEMG00000012896Gspt19294.521Peromyscus_maniculatus_bairdii
ENSMODG00000004728-9982.222ENSPCIG00000005432-9282.143Phascolarctos_cinereus
ENSMODG00000004728-8796.905ENSPCIG00000026776-10096.495Phascolarctos_cinereus
ENSMODG00000004728-9988.107ENSPCIG00000007435-9390.067Phascolarctos_cinereus
ENSMODG00000004728-9978.291ENSPFOG00000016035gspt1l9676.701Poecilia_formosa
ENSMODG00000004728-7392.974ENSPFOG00000005224-9677.929Poecilia_formosa
ENSMODG00000004728-5884.751ENSPLAG00000007443GSPT16982.216Poecilia_latipinna
ENSMODG00000004728-6092.373ENSPLAG00000001492-9275.095Poecilia_latipinna
ENSMODG00000004728-9978.291ENSPMEG00000022359gspt1l9676.740Poecilia_mexicana
ENSMODG00000004728-7392.974ENSPMEG00000007020-9783.061Poecilia_mexicana
ENSMODG00000004728-7691.648ENSPREG00000016668-9986.061Poecilia_reticulata
ENSMODG00000004728-9876.215ENSPREG00000008023gspt1l8576.644Poecilia_reticulata
ENSMODG00000004728-10093.686ENSPPYG00000007114GSPT18494.007Pongo_abelii
ENSMODG00000004728-10080.102ENSPCAG00000011379GSPT18179.932Procavia_capensis
ENSMODG00000004728-10093.345ENSPCOG00000013204GSPT110092.184Propithecus_coquereli
ENSMODG00000004728-10093.515ENSPVAG00000005009GSPT18194.692Pteropus_vampyrus
ENSMODG00000004728-9978.840ENSPNYG00000010474gspt1l9678.498Pundamilia_nyererei
ENSMODG00000004728-9977.554ENSPNYG00000002903-9987.475Pundamilia_nyererei
ENSMODG00000004728-9978.741ENSPNAG00000002605gspt1l9578.024Pygocentrus_nattereri
ENSMODG00000004728-9679.718ENSPNAG00000011819gspt19479.718Pygocentrus_nattereri
ENSMODG00000004728-10093.548ENSRNOG00000046271LOC1009116859193.186Rattus_norvegicus
ENSMODG00000004728-8997.500ENSRBIG00000039784GSPT110097.500Rhinopithecus_bieti
ENSMODG00000004728-8997.308ENSRROG00000031350GSPT110097.996Rhinopithecus_roxellana
ENSMODG00000004728-8997.500ENSSBOG00000017761GSPT110097.500Saimiri_boliviensis_boliviensis
ENSMODG00000004728-8999.040ENSSHAG00000005908-10099.040Sarcophilus_harrisii
ENSMODG00000004728-9983.446ENSSHAG00000002700-9782.125Sarcophilus_harrisii
ENSMODG00000004728-9981.197ENSSFOG00015011277gspt19681.197Scleropages_formosus
ENSMODG00000004728-9678.735ENSSFOG00015014731-9479.262Scleropages_formosus
ENSMODG00000004728-9977.119ENSSMAG00000014782gspt1l9677.834Scophthalmus_maximus
ENSMODG00000004728-9979.046ENSSDUG00000016908gspt1l9678.632Seriola_dumerili
ENSMODG00000004728-9979.387ENSSLDG00000009000gspt1l9678.752Seriola_lalandi_dorsalis
ENSMODG00000004728-6789.114ENSSARG00000013461-6287.089Sorex_araneus
ENSMODG00000004728-6592.063ENSSPUG00000007536GSPT16492.063Sphenodon_punctatus
ENSMODG00000004728-9979.457ENSSPAG00000011542gspt1l9685.341Stegastes_partitus
ENSMODG00000004728-7492.644ENSSPAG00000009785-9985.317Stegastes_partitus
ENSMODG00000004728-9977.320ENSSPAG00000004622-9677.000Stegastes_partitus
ENSMODG00000004728-10093.003ENSSSCG00000021118GSPT19194.178Sus_scrofa
ENSMODG00000004728-8996.169ENSTGUG00000005103GSPT19996.169Taeniopygia_guttata
ENSMODG00000004728-6991.111ENSTRUG00000016971-10091.111Takifugu_rubripes
ENSMODG00000004728-9975.340ENSTRUG00000012645gspt1l9676.581Takifugu_rubripes
ENSMODG00000004728-9974.746ENSTNIG00000012926GSPT19674.576Tetraodon_nigroviridis
ENSMODG00000004728-8583.400ENSTNIG00000010212gspt1l10082.800Tetraodon_nigroviridis
ENSMODG00000004728-5195.333ENSTBEG00000008873-5895.333Tupaia_belangeri
ENSMODG00000004728-10092.662ENSTTRG00000011630GSPT18293.151Tursiops_truncatus
ENSMODG00000004728-8596.192ENSUAMG00000004460GSPT110096.192Ursus_americanus
ENSMODG00000004728-8698.416ENSUMAG00000004033GSPT110098.416Ursus_maritimus
ENSMODG00000004728-9097.148ENSVPAG00000006903GSPT18597.148Vicugna_pacos
ENSMODG00000004728-8997.505ENSVVUG00000018198GSPT19697.505Vulpes_vulpes
ENSMODG00000004728-10080.272ENSXETG00000005540gspt19979.898Xenopus_tropicalis
ENSMODG00000004728-9876.481ENSXCOG00000003084-9983.936Xiphophorus_couchianus
ENSMODG00000004728-8382.688ENSXCOG00000016099gspt1l9980.730Xiphophorus_couchianus
ENSMODG00000004728-9978.462ENSXMAG00000007284gspt1l9676.740Xiphophorus_maculatus

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