EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000004915 (Gene tree)
Gene ID: -
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 84620 bases
Position: chr6:109021055-109105674
Accession: 8609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000006050	R3H	PF01424.22	2e-05	1	1
ENSMODP00000006050	RNA_bind	PF08675.11	2.2e-26	1	1
ENSMODP00000006050	CAF1	PF04857.20	1.5e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000006178	PARN-201	1737	-	ENSMODP00000006050	499 (aa)	-	F7BH34

Gene Model

Click here to download ENSMODG00000004915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000004915's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000004915	PARN	99	94.556	ENSG00000140694	PARN	99	86.411	Homo_sapiens
ENSMODG00000004915	PARN	99	93.360	ENSAMEG00000011208	PARN	77	93.360	Ailuropoda_melanoleuca
ENSMODG00000004915	PARN	99	78.068	ENSACIG00000000619	parn	77	78.068	Amphilophus_citrinellus
ENSMODG00000004915	PARN	99	80.483	ENSAOCG00000003465	parn	72	80.483	Amphiprion_ocellaris
ENSMODG00000004915	PARN	87	80.645	ENSAPEG00000010661	parn	83	80.645	Amphiprion_percula
ENSMODG00000004915	PARN	99	81.690	ENSATEG00000004661	parn	72	81.690	Anabas_testudineus
ENSMODG00000004915	PARN	98	91.446	ENSAPLG00000013914	PARN	77	91.446	Anas_platyrhynchos
ENSMODG00000004915	PARN	99	87.928	ENSACAG00000004973	PARN	76	87.928	Anolis_carolinensis
ENSMODG00000004915	PARN	99	93.548	ENSANAG00000031516	PARN	92	90.000	Aotus_nancymaae
ENSMODG00000004915	PARN	99	81.087	ENSACLG00000004742	parn	73	81.087	Astatotilapia_calliptera
ENSMODG00000004915	PARN	99	80.040	ENSAMXG00000012390	parn	81	77.419	Astyanax_mexicanus
ENSMODG00000004915	PARN	99	90.524	ENSBTAG00000018097	PARN	75	94.919	Bos_taurus
ENSMODG00000004915	PARN	99	93.952	ENSCJAG00000015866	PARN	92	90.000	Callithrix_jacchus
ENSMODG00000004915	PARN	99	92.944	ENSCAFG00000018795	PARN	77	92.944	Canis_familiaris
ENSMODG00000004915	PARN	99	92.944	ENSCAFG00020024126	PARN	77	92.944	Canis_lupus_dingo
ENSMODG00000004915	PARN	99	94.153	ENSCHIG00000018143	PARN	77	94.153	Capra_hircus
ENSMODG00000004915	PARN	98	60.239	ENSCAPG00000007984	PARN	82	60.239	Cavia_aperea
ENSMODG00000004915	PARN	99	92.137	ENSCPOG00000002263	PARN	78	92.137	Cavia_porcellus
ENSMODG00000004915	PARN	99	93.750	ENSCCAG00000030367	PARN	92	90.000	Cebus_capucinus
ENSMODG00000004915	PARN	99	94.141	ENSCATG00000041368	PARN	89	93.952	Cercocebus_atys
ENSMODG00000004915	PARN	67	36.301	ENSCATG00000033196	PNLDC1	70	36.301	Cercocebus_atys
ENSMODG00000004915	PARN	99	92.540	ENSCLAG00000015406	PARN	77	92.540	Chinchilla_lanigera
ENSMODG00000004915	PARN	99	94.355	ENSCSAG00000008142	PARN	77	94.355	Chlorocebus_sabaeus
ENSMODG00000004915	PARN	87	80.184	ENSCHOG00000007014	PARN	71	80.184	Choloepus_hoffmanni
ENSMODG00000004915	PARN	87	93.533	ENSCPBG00000006609	PARN	75	93.533	Chrysemys_picta_bellii
ENSMODG00000004915	PARN	100	44.101	ENSCING00000010142	-	97	44.101	Ciona_intestinalis
ENSMODG00000004915	PARN	99	79.648	ENSCANG00000028849	-	68	91.525	Colobus_angolensis_palliatus
ENSMODG00000004915	PARN	99	89.113	ENSCGRG00001012096	Parn	78	89.113	Cricetulus_griseus_chok1gshd
ENSMODG00000004915	PARN	99	89.113	ENSCGRG00000004939	Parn	78	89.113	Cricetulus_griseus_crigri
ENSMODG00000004915	PARN	99	77.264	ENSCSEG00000002064	parn	100	63.677	Cynoglossus_semilaevis
ENSMODG00000004915	PARN	99	80.684	ENSCVAG00000014848	parn	73	80.684	Cyprinodon_variegatus
ENSMODG00000004915	PARN	99	75.806	ENSDARG00000102634	parn	100	62.037	Danio_rerio
ENSMODG00000004915	PARN	99	94.153	ENSDNOG00000000833	PARN	87	94.153	Dasypus_novemcinctus
ENSMODG00000004915	PARN	84	90.494	ENSETEG00000014828	-	69	90.494	Echinops_telfairi
ENSMODG00000004915	PARN	88	30.263	ENSEBUG00000008118	PNLDC1	81	30.263	Eptatretus_burgeri
ENSMODG00000004915	PARN	99	93.952	ENSEASG00005011400	PARN	78	93.952	Equus_asinus_asinus
ENSMODG00000004915	PARN	99	93.548	ENSECAG00000017792	PARN	78	93.548	Equus_caballus
ENSMODG00000004915	PARN	82	79.638	ENSEEUG00000010370	PARN	64	79.638	Erinaceus_europaeus
ENSMODG00000004915	PARN	99	79.435	ENSELUG00000013139	parn	65	79.435	Esox_lucius
ENSMODG00000004915	PARN	99	94.153	ENSFCAG00000044961	PARN	77	94.153	Felis_catus
ENSMODG00000004915	PARN	74	31.152	ENSFALG00000012081	PNLDC1	70	31.152	Ficedula_albicollis
ENSMODG00000004915	PARN	98	91.002	ENSFALG00000003911	PARN	76	91.002	Ficedula_albicollis
ENSMODG00000004915	PARN	99	92.137	ENSFDAG00000009234	PARN	78	92.137	Fukomys_damarensis
ENSMODG00000004915	PARN	99	74.648	ENSFHEG00000013738	parn	92	77.966	Fundulus_heteroclitus
ENSMODG00000004915	PARN	99	78.873	ENSGMOG00000003231	parn	90	78.873	Gadus_morhua
ENSMODG00000004915	PARN	99	92.137	ENSGALG00000003091	PARN	78	92.137	Gallus_gallus
ENSMODG00000004915	PARN	99	80.684	ENSGAFG00000011061	parn	72	80.684	Gambusia_affinis
ENSMODG00000004915	PARN	99	79.074	ENSGACG00000019501	parn	79	79.074	Gasterosteus_aculeatus
ENSMODG00000004915	PARN	99	94.556	ENSGGOG00000025224	PARN	92	90.000	Gorilla_gorilla
ENSMODG00000004915	PARN	99	81.087	ENSHBUG00000017906	parn	83	78.800	Haplochromis_burtoni
ENSMODG00000004915	PARN	99	91.935	ENSHGLG00000010886	PARN	78	91.935	Heterocephalus_glaber_female
ENSMODG00000004915	PARN	99	91.935	ENSHGLG00100014659	PARN	78	91.935	Heterocephalus_glaber_male
ENSMODG00000004915	PARN	98	75.306	ENSHCOG00000008683	parn	84	75.306	Hippocampus_comes
ENSMODG00000004915	PARN	99	66.935	ENSIPUG00000012401	parn	73	66.935	Ictalurus_punctatus
ENSMODG00000004915	PARN	99	93.145	ENSSTOG00000007519	PARN	78	93.145	Ictidomys_tridecemlineatus
ENSMODG00000004915	PARN	99	91.129	ENSJJAG00000023049	Parn	79	91.129	Jaculus_jaculus
ENSMODG00000004915	PARN	99	80.684	ENSKMAG00000009462	parn	73	80.684	Kryptolebias_marmoratus
ENSMODG00000004915	PARN	99	80.080	ENSLBEG00000009167	parn	77	80.080	Labrus_bergylta
ENSMODG00000004915	PARN	99	82.556	ENSLACG00000004207	PARN	100	78.638	Latimeria_chalumnae
ENSMODG00000004915	PARN	99	82.258	ENSLOCG00000000715	parn	72	82.258	Lepisosteus_oculatus
ENSMODG00000004915	PARN	62	31.111	ENSLAFG00000030189	PNLDC1	89	30.149	Loxodonta_africana
ENSMODG00000004915	PARN	99	93.145	ENSLAFG00000015036	PARN	78	93.145	Loxodonta_africana
ENSMODG00000004915	PARN	99	89.516	ENSMFAG00000044852	PARN	75	95.150	Macaca_fascicularis
ENSMODG00000004915	PARN	99	94.355	ENSMMUG00000018849	PARN	77	94.355	Macaca_mulatta
ENSMODG00000004915	PARN	99	94.355	ENSMNEG00000045108	PARN	77	94.355	Macaca_nemestrina
ENSMODG00000004915	PARN	99	94.153	ENSMLEG00000031743	PARN	77	94.153	Mandrillus_leucophaeus
ENSMODG00000004915	PARN	99	79.879	ENSMAMG00000006939	parn	72	79.879	Mastacembelus_armatus
ENSMODG00000004915	PARN	99	81.087	ENSMZEG00005013590	parn	84	78.357	Maylandia_zebra
ENSMODG00000004915	PARN	95	91.525	ENSMGAG00000001004	PARN	74	91.525	Meleagris_gallopavo
ENSMODG00000004915	PARN	99	82.178	ENSMAUG00000008025	Parn	78	82.178	Mesocricetus_auratus
ENSMODG00000004915	PARN	99	94.355	ENSMICG00000016053	PARN	92	91.667	Microcebus_murinus
ENSMODG00000004915	PARN	99	89.113	ENSMOCG00000022211	Parn	100	89.113	Microtus_ochrogaster
ENSMODG00000004915	PARN	99	78.068	ENSMMOG00000011333	parn	80	78.068	Mola_mola
ENSMODG00000004915	PARN	99	80.120	ENSMALG00000019426	parn	84	80.120	Monopterus_albus
ENSMODG00000004915	PARN	99	88.508	MGP_CAROLIEiJ_G0020466	Parn	78	88.508	Mus_caroli
ENSMODG00000004915	PARN	66	30.030	ENSMUSG00000073460	Pnldc1	97	30.030	Mus_musculus
ENSMODG00000004915	PARN	99	88.508	ENSMUSG00000022685	Parn	100	88.095	Mus_musculus
ENSMODG00000004915	PARN	99	88.105	MGP_PahariEiJ_G0016172	Parn	78	88.105	Mus_pahari
ENSMODG00000004915	PARN	99	88.508	MGP_SPRETEiJ_G0021361	Parn	78	88.508	Mus_spretus
ENSMODG00000004915	PARN	99	94.153	ENSMPUG00000014464	PARN	77	94.153	Mustela_putorius_furo
ENSMODG00000004915	PARN	99	91.935	ENSMLUG00000005414	PARN	100	91.935	Myotis_lucifugus
ENSMODG00000004915	PARN	99	77.867	ENSNBRG00000006805	parn	84	77.867	Neolamprologus_brichardi
ENSMODG00000004915	PARN	99	94.556	ENSNLEG00000010241	PARN	92	90.000	Nomascus_leucogenys
ENSMODG00000004915	PARN	93	69.978	ENSMEUG00000008178	-	73	69.978	Notamacropus_eugenii
ENSMODG00000004915	PARN	98	87.321	ENSOPRG00000012187	PARN	77	87.321	Ochotona_princeps
ENSMODG00000004915	PARN	99	83.567	ENSODEG00000001617	PARN	79	83.567	Octodon_degus
ENSMODG00000004915	PARN	99	81.250	ENSONIG00000000151	parn	76	81.250	Oreochromis_niloticus
ENSMODG00000004915	PARN	99	92.292	ENSOCUG00000000322	PARN	77	92.292	Oryctolagus_cuniculus
ENSMODG00000004915	PARN	99	79.477	ENSORLG00020010313	parn	74	79.477	Oryzias_latipes_hni
ENSMODG00000004915	PARN	99	79.276	ENSORLG00015000300	parn	74	79.276	Oryzias_latipes_hsok
ENSMODG00000004915	PARN	99	79.678	ENSOMEG00000019555	parn	97	67.265	Oryzias_melastigma
ENSMODG00000004915	PARN	99	91.111	ENSOGAG00000014626	PARN	100	91.111	Otolemur_garnettii
ENSMODG00000004915	PARN	99	94.153	ENSOARG00000007574	PARN	100	94.153	Ovis_aries
ENSMODG00000004915	PARN	99	94.556	ENSPPAG00000031438	PARN	92	90.000	Pan_paniscus
ENSMODG00000004915	PARN	99	94.153	ENSPPRG00000018583	PARN	77	94.153	Panthera_pardus
ENSMODG00000004915	PARN	99	94.153	ENSPTIG00000012135	PARN	77	94.153	Panthera_tigris_altaica
ENSMODG00000004915	PARN	99	94.153	ENSPTRG00000007792	PARN	92	90.000	Pan_troglodytes
ENSMODG00000004915	PARN	99	90.524	ENSPANG00000020099	PARN	77	90.323	Papio_anubis
ENSMODG00000004915	PARN	99	79.839	ENSPKIG00000022807	parn	78	74.701	Paramormyrops_kingsleyae
ENSMODG00000004915	PARN	99	91.935	ENSPSIG00000014804	PARN	77	91.935	Pelodiscus_sinensis
ENSMODG00000004915	PARN	99	75.654	ENSPMGG00000014431	parn	68	76.056	Periophthalmus_magnuspinnatus
ENSMODG00000004915	PARN	99	86.492	ENSPEMG00000018439	Parn	78	86.492	Peromyscus_maniculatus_bairdii
ENSMODG00000004915	PARN	99	68.200	ENSPMAG00000003956	parn	94	68.200	Petromyzon_marinus
ENSMODG00000004915	PARN	85	91.294	ENSPCIG00000001259	PARN	92	98.333	Phascolarctos_cinereus
ENSMODG00000004915	PARN	99	80.483	ENSPFOG00000012823	parn	72	80.483	Poecilia_formosa
ENSMODG00000004915	PARN	99	80.684	ENSPLAG00000006395	parn	72	80.684	Poecilia_latipinna
ENSMODG00000004915	PARN	99	80.684	ENSPMEG00000007711	parn	72	80.684	Poecilia_mexicana
ENSMODG00000004915	PARN	99	80.483	ENSPREG00000000147	parn	72	80.483	Poecilia_reticulata
ENSMODG00000004915	PARN	99	93.952	ENSPPYG00000007123	PARN	77	93.952	Pongo_abelii
ENSMODG00000004915	PARN	88	85.812	ENSPCAG00000001741	PARN	72	85.812	Procavia_capensis
ENSMODG00000004915	PARN	99	91.129	ENSPCOG00000019292	PARN	92	91.667	Propithecus_coquereli
ENSMODG00000004915	PARN	98	89.366	ENSPVAG00000002547	PARN	77	89.366	Pteropus_vampyrus
ENSMODG00000004915	PARN	99	81.087	ENSPNYG00000006835	parn	83	75.600	Pundamilia_nyererei
ENSMODG00000004915	PARN	90	80.000	ENSPNAG00000018905	parn	74	80.000	Pygocentrus_nattereri
ENSMODG00000004915	PARN	99	88.508	ENSRNOG00000002912	Parn	98	85.859	Rattus_norvegicus
ENSMODG00000004915	PARN	66	30.030	ENSRNOG00000023140	Pnldc1	89	30.030	Rattus_norvegicus
ENSMODG00000004915	PARN	99	91.734	ENSSBOG00000034726	PARN	77	91.734	Saimiri_boliviensis_boliviensis
ENSMODG00000004915	PARN	84	97.381	ENSSHAG00000008493	PARN	94	97.381	Sarcophilus_harrisii
ENSMODG00000004915	PARN	99	81.452	ENSSFOG00015014165	parn	82	79.637	Scleropages_formosus
ENSMODG00000004915	PARN	99	77.666	ENSSMAG00000000685	parn	81	72.366	Scophthalmus_maximus
ENSMODG00000004915	PARN	99	80.282	ENSSDUG00000014555	parn	72	80.282	Seriola_dumerili
ENSMODG00000004915	PARN	87	93.548	ENSSARG00000014339	PARN	75	93.548	Sorex_araneus
ENSMODG00000004915	PARN	99	92.137	ENSSPUG00000007719	PARN	77	92.137	Sphenodon_punctatus
ENSMODG00000004915	PARN	99	81.690	ENSSPAG00000007095	parn	80	76.056	Stegastes_partitus
ENSMODG00000004915	PARN	99	94.355	ENSSSCG00000007878	PARN	69	94.355	Sus_scrofa
ENSMODG00000004915	PARN	71	30.663	ENSTGUG00000011418	PNLDC1	68	30.663	Taeniopygia_guttata
ENSMODG00000004915	PARN	98	91.242	ENSTGUG00000004971	PARN	77	91.242	Taeniopygia_guttata
ENSMODG00000004915	PARN	99	80.080	ENSTNIG00000008252	parn	79	80.080	Tetraodon_nigroviridis
ENSMODG00000004915	PARN	87	77.241	ENSTBEG00000010407	PARN	75	77.241	Tupaia_belangeri
ENSMODG00000004915	PARN	98	93.238	ENSTTRG00000002843	PARN	77	93.238	Tursiops_truncatus
ENSMODG00000004915	PARN	87	81.797	ENSUAMG00000008283	PARN	94	77.803	Ursus_americanus
ENSMODG00000004915	PARN	99	93.750	ENSUMAG00000004527	PARN	77	93.750	Ursus_maritimus
ENSMODG00000004915	PARN	98	90.184	ENSVPAG00000008968	PARN	79	90.184	Vicugna_pacos
ENSMODG00000004915	PARN	99	93.548	ENSVVUG00000019509	PARN	77	93.548	Vulpes_vulpes
ENSMODG00000004915	PARN	99	84.073	ENSXETG00000010994	parn	94	84.073	Xenopus_tropicalis
ENSMODG00000004915	PARN	99	75.703	ENSXCOG00000015990	parn	83	75.703	Xiphophorus_couchianus
ENSMODG00000004915	PARN	99	80.684	ENSXMAG00000014783	parn	72	80.684	Xiphophorus_maculatus