EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000005210 (Gene tree)
Gene ID: 100024055
Gene Symbol: RPUSD3
Alias: -
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 5403 bases
Position: chr6:242661879-242667281
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000006417	PseudoU_synth_2	PF00849.22	3.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000006552	RPUSD3-201	1494	-	ENSMODP00000006417	377 (aa)	-	F7A209

Gene Model

Click here to download ENSMODG00000005210's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000005210's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000005210	RPUSD3	67	32.463	ENSMODG00000004521	RPUSD4	54	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000005210	RPUSD3	89	55.394	ENSG00000156990	RPUSD3	96	55.394	Homo_sapiens
ENSMODG00000005210	RPUSD3	87	55.589	ENSAMEG00000016227	RPUSD3	94	57.100	Ailuropoda_melanoleuca
ENSMODG00000005210	RPUSD3	85	48.632	ENSACAG00000009836	RPUSD3	91	48.632	Anolis_carolinensis
ENSMODG00000005210	RPUSD3	60	42.678	ENSANAG00000007127	-	92	39.175	Aotus_nancymaae
ENSMODG00000005210	RPUSD3	86	54.545	ENSBTAG00000007968	RPUSD3	96	54.683	Bos_taurus
ENSMODG00000005210	RPUSD3	90	56.395	ENSCAFG00000029733	RPUSD3	98	56.232	Canis_familiaris
ENSMODG00000005210	RPUSD3	90	56.395	ENSCAFG00020008582	RPUSD3	98	56.232	Canis_lupus_dingo
ENSMODG00000005210	RPUSD3	76	60.417	ENSCHIG00000026027	RPUSD3	87	60.208	Capra_hircus
ENSMODG00000005210	RPUSD3	90	53.161	ENSTSYG00000009994	RPUSD3	99	53.161	Carlito_syrichta
ENSMODG00000005210	RPUSD3	68	62.692	ENSCAPG00000017559	RPUSD3	98	62.692	Cavia_aperea
ENSMODG00000005210	RPUSD3	70	61.423	ENSCPOG00000037956	RPUSD3	82	57.877	Cavia_porcellus
ENSMODG00000005210	RPUSD3	90	55.398	ENSCCAG00000029530	RPUSD3	99	55.398	Cebus_capucinus
ENSMODG00000005210	RPUSD3	80	59.539	ENSCATG00000036939	RPUSD3	92	56.122	Cercocebus_atys
ENSMODG00000005210	RPUSD3	80	59.211	ENSCSAG00000010506	RPUSD3	86	59.211	Chlorocebus_sabaeus
ENSMODG00000005210	RPUSD3	64	56.967	ENSCPBG00000008825	RPUSD3	92	58.197	Chrysemys_picta_bellii
ENSMODG00000005210	RPUSD3	87	56.587	ENSCANG00000040711	RPUSD3	95	56.587	Colobus_angolensis_palliatus
ENSMODG00000005210	RPUSD3	79	56.291	ENSCGRG00001004923	Rpusd3	83	56.291	Cricetulus_griseus_chok1gshd
ENSMODG00000005210	RPUSD3	79	56.291	ENSCGRG00000018315	Rpusd3	88	56.291	Cricetulus_griseus_crigri
ENSMODG00000005210	RPUSD3	80	58.882	ENSDNOG00000039160	RPUSD3	80	59.211	Dasypus_novemcinctus
ENSMODG00000005210	RPUSD3	68	60.985	ENSDORG00000026827	Rpusd3	92	60.985	Dipodomys_ordii
ENSMODG00000005210	RPUSD3	92	52.149	ENSETEG00000006538	RPUSD3	95	54.030	Echinops_telfairi
ENSMODG00000005210	RPUSD3	55	36.019	ENSEBUG00000015605	RPUSD3	69	36.019	Eptatretus_burgeri
ENSMODG00000005210	RPUSD3	77	55.290	ENSEASG00005014160	RPUSD3	93	55.490	Equus_asinus_asinus
ENSMODG00000005210	RPUSD3	77	55.973	ENSECAG00000019988	RPUSD3	93	56.083	Equus_caballus
ENSMODG00000005210	RPUSD3	56	59.434	ENSEEUG00000007353	RPUSD3	60	59.434	Erinaceus_europaeus
ENSMODG00000005210	RPUSD3	90	57.310	ENSFCAG00000014199	RPUSD3	97	57.143	Felis_catus
ENSMODG00000005210	RPUSD3	71	48.699	ENSFALG00000012968	RPUSD3	99	48.699	Ficedula_albicollis
ENSMODG00000005210	RPUSD3	69	62.214	ENSFDAG00000008350	RPUSD3	86	60.072	Fukomys_damarensis
ENSMODG00000005210	RPUSD3	69	55.000	ENSGAGG00000007493	RPUSD3	82	58.846	Gopherus_agassizii
ENSMODG00000005210	RPUSD3	89	56.268	ENSGGOG00000013120	RPUSD3	96	56.268	Gorilla_gorilla
ENSMODG00000005210	RPUSD3	73	60.432	ENSHGLG00000011722	RPUSD3	71	60.432	Heterocephalus_glaber_female
ENSMODG00000005210	RPUSD3	73	60.432	ENSHGLG00100016038	RPUSD3	71	60.432	Heterocephalus_glaber_male
ENSMODG00000005210	RPUSD3	88	56.342	ENSSTOG00000002125	RPUSD3	95	56.342	Ictidomys_tridecemlineatus
ENSMODG00000005210	RPUSD3	88	54.303	ENSJJAG00000012679	Rpusd3	98	54.303	Jaculus_jaculus
ENSMODG00000005210	RPUSD3	89	54.867	ENSLAFG00000017501	RPUSD3	98	54.867	Loxodonta_africana
ENSMODG00000005210	RPUSD3	80	59.539	ENSMFAG00000032407	RPUSD3	86	59.539	Macaca_fascicularis
ENSMODG00000005210	RPUSD3	80	59.211	ENSMMUG00000010628	RPUSD3	95	59.211	Macaca_mulatta
ENSMODG00000005210	RPUSD3	80	58.882	ENSMNEG00000040308	RPUSD3	86	58.882	Macaca_nemestrina
ENSMODG00000005210	RPUSD3	87	56.587	ENSMLEG00000033940	RPUSD3	95	56.587	Mandrillus_leucophaeus
ENSMODG00000005210	RPUSD3	78	56.566	ENSMAUG00000015473	Rpusd3	93	54.321	Mesocricetus_auratus
ENSMODG00000005210	RPUSD3	76	62.976	ENSMICG00000002315	RPUSD3	96	57.075	Microcebus_murinus
ENSMODG00000005210	RPUSD3	79	56.291	ENSMOCG00000022613	Rpusd3	94	53.495	Microtus_ochrogaster
ENSMODG00000005210	RPUSD3	79	57.475	MGP_CAROLIEiJ_G0028725	Rpusd3	90	57.851	Mus_caroli
ENSMODG00000005210	RPUSD3	79	57.475	ENSMUSG00000051169	Rpusd3	90	57.851	Mus_musculus
ENSMODG00000005210	RPUSD3	79	57.143	MGP_PahariEiJ_G0022476	Rpusd3	90	57.851	Mus_pahari
ENSMODG00000005210	RPUSD3	79	57.807	MGP_SPRETEiJ_G0029753	Rpusd3	90	57.851	Mus_spretus
ENSMODG00000005210	RPUSD3	90	56.268	ENSMPUG00000017132	RPUSD3	97	56.268	Mustela_putorius_furo
ENSMODG00000005210	RPUSD3	88	57.270	ENSMLUG00000006135	RPUSD3	97	57.270	Myotis_lucifugus
ENSMODG00000005210	RPUSD3	84	56.113	ENSNGAG00000023704	Rpusd3	95	56.113	Nannospalax_galili
ENSMODG00000005210	RPUSD3	90	45.170	ENSNLEG00000004214	RPUSD3	95	54.680	Nomascus_leucogenys
ENSMODG00000005210	RPUSD3	68	84.496	ENSMEUG00000013098	-	100	84.496	Notamacropus_eugenii
ENSMODG00000005210	RPUSD3	90	46.957	ENSOPRG00000002300	RPUSD3	98	46.957	Ochotona_princeps
ENSMODG00000005210	RPUSD3	68	61.923	ENSODEG00000018137	RPUSD3	90	61.923	Octodon_degus
ENSMODG00000005210	RPUSD3	75	48.070	ENSOANG00000012081	-	99	48.070	Ornithorhynchus_anatinus
ENSMODG00000005210	RPUSD3	77	52.000	ENSOCUG00000027885	RPUSD3	87	52.000	Oryctolagus_cuniculus
ENSMODG00000005210	RPUSD3	81	58.576	ENSOGAG00000012592	RPUSD3	99	58.387	Otolemur_garnettii
ENSMODG00000005210	RPUSD3	90	54.519	ENSOARG00000005928	RPUSD3	94	55.589	Ovis_aries
ENSMODG00000005210	RPUSD3	89	54.958	ENSPPAG00000038083	RPUSD3	99	54.958	Pan_paniscus
ENSMODG00000005210	RPUSD3	90	57.018	ENSPPRG00000024433	RPUSD3	97	56.851	Panthera_pardus
ENSMODG00000005210	RPUSD3	89	57.185	ENSPTIG00000006828	RPUSD3	99	57.018	Panthera_tigris_altaica
ENSMODG00000005210	RPUSD3	89	54.958	ENSPTRG00000051760	RPUSD3	99	54.958	Pan_troglodytes
ENSMODG00000005210	RPUSD3	80	59.539	ENSPANG00000023885	RPUSD3	92	56.122	Papio_anubis
ENSMODG00000005210	RPUSD3	79	56.954	ENSPEMG00000017245	Rpusd3	88	56.954	Peromyscus_maniculatus_bairdii
ENSMODG00000005210	RPUSD3	92	80.925	ENSPCIG00000021901	RPUSD3	100	80.925	Phascolarctos_cinereus
ENSMODG00000005210	RPUSD3	90	57.061	ENSPPYG00000013676	RPUSD3	97	57.061	Pongo_abelii
ENSMODG00000005210	RPUSD3	86	56.798	ENSPCOG00000018314	RPUSD3	94	56.627	Propithecus_coquereli
ENSMODG00000005210	RPUSD3	89	54.678	ENSPVAG00000011107	RPUSD3	96	54.971	Pteropus_vampyrus
ENSMODG00000005210	RPUSD3	80	53.289	ENSRNOG00000009084	Rpusd3	90	53.289	Rattus_norvegicus
ENSMODG00000005210	RPUSD3	87	56.587	ENSRBIG00000041230	RPUSD3	95	56.587	Rhinopithecus_bieti
ENSMODG00000005210	RPUSD3	90	54.830	ENSRROG00000043328	RPUSD3	99	54.830	Rhinopithecus_roxellana
ENSMODG00000005210	RPUSD3	76	62.414	ENSSBOG00000036106	RPUSD3	99	55.114	Saimiri_boliviensis_boliviensis
ENSMODG00000005210	RPUSD3	81	82.085	ENSSHAG00000015536	RPUSD3	99	82.085	Sarcophilus_harrisii
ENSMODG00000005210	RPUSD3	82	58.333	ENSSSCG00000011555	RPUSD3	89	58.333	Sus_scrofa
ENSMODG00000005210	RPUSD3	62	52.155	ENSTGUG00000008744	RPUSD3	94	52.074	Taeniopygia_guttata
ENSMODG00000005210	RPUSD3	73	54.480	ENSTBEG00000000176	RPUSD3	95	54.480	Tupaia_belangeri
ENSMODG00000005210	RPUSD3	90	54.094	ENSTTRG00000007544	RPUSD3	97	54.227	Tursiops_truncatus
ENSMODG00000005210	RPUSD3	81	57.605	ENSUAMG00000011354	RPUSD3	97	59.032	Ursus_americanus
ENSMODG00000005210	RPUSD3	86	56.061	ENSUMAG00000018830	RPUSD3	94	57.402	Ursus_maritimus
ENSMODG00000005210	RPUSD3	90	56.851	ENSVVUG00000023735	RPUSD3	99	56.851	Vulpes_vulpes
ENSMODG00000005210	RPUSD3	73	49.286	ENSXETG00000023546	rpusd3	99	49.286	Xenopus_tropicalis