EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMODG00000005250 (Gene tree)
Gene ID
100015567
Gene Symbol
RBMS1
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Monodelphis_domestica
Status
putative
Strand
Minus strand
Length
274987 bases
Position
chr4:165863247-166138233
Accession
100015567
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMODP00000006475RRM_1PF00076.223.4e-3312
ENSMODP00000006475RRM_1PF00076.223.4e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMODT00000006610RBMS1-2013789XM_007494250ENSMODP00000006475403 (aa)XP_007494312F7GH32
Gene Model
Click here to download ENSMODG00000005250's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000005250's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMODG00000005250RBMS15535.204ENSMODG00000003850-8636.628
ENSMODG00000005250RBMS110068.071ENSMODG00000015125RBMS38772.821
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMODG00000005250RBMS110093.596ENSG00000153250RBMS110096.850Homo_sapiens
ENSMODG00000005250RBMS18965.000ENSAPOG00000013761rbms1a8965.116Acanthochromis_polyacanthus
ENSMODG00000005250RBMS18780.170ENSAPOG00000024437-9578.478Acanthochromis_polyacanthus
ENSMODG00000005250RBMS19492.708ENSAMEG00000012661RBMS110092.708Ailuropoda_melanoleuca
ENSMODG00000005250RBMS17466.443ENSACIG00000000113rbms1a8166.667Amphilophus_citrinellus
ENSMODG00000005250RBMS19677.378ENSACIG00000021498RBMS19479.255Amphilophus_citrinellus
ENSMODG00000005250RBMS19379.737ENSAOCG00000014482-9579.737Amphiprion_ocellaris
ENSMODG00000005250RBMS18664.928ENSAOCG00000010066rbms1a8965.217Amphiprion_ocellaris
ENSMODG00000005250RBMS18664.928ENSAPEG00000023563rbms1a8965.217Amphiprion_percula
ENSMODG00000005250RBMS19379.474ENSAPEG00000018371-9579.474Amphiprion_percula
ENSMODG00000005250RBMS18965.278ENSATEG00000015450rbms1a8965.407Anabas_testudineus
ENSMODG00000005250RBMS19576.166ENSATEG00000018573RBMS18979.545Anabas_testudineus
ENSMODG00000005250RBMS19896.203ENSAPLG00000007282RBMS110096.203Anas_platyrhynchos
ENSMODG00000005250RBMS19595.337ENSACAG00000011984RBMS18095.337Anolis_carolinensis
ENSMODG00000005250RBMS17993.789ENSANAG00000024424RBMS110093.789Aotus_nancymaae
ENSMODG00000005250RBMS19575.781ENSACLG00000013048RBMS19675.781Astatotilapia_calliptera
ENSMODG00000005250RBMS18665.029ENSACLG00000021512rbms1a9065.217Astatotilapia_calliptera
ENSMODG00000005250RBMS18773.580ENSAMXG00000002146rbms1a8873.580Astyanax_mexicanus
ENSMODG00000005250RBMS110075.490ENSAMXG00000009969RBMS110074.265Astyanax_mexicanus
ENSMODG00000005250RBMS110090.758ENSBTAG00000005180RBMS110090.758Bos_taurus
ENSMODG00000005250RBMS110093.842ENSCJAG00000014861-10093.842Callithrix_jacchus
ENSMODG00000005250RBMS19987.781ENSCJAG00000012871-9991.421Callithrix_jacchus
ENSMODG00000005250RBMS19188.525ENSCJAG00000022465-9888.127Callithrix_jacchus
ENSMODG00000005250RBMS19593.229ENSCAFG00000009922RBMS19593.229Canis_familiaris
ENSMODG00000005250RBMS110094.541ENSCAFG00020006120RBMS110094.541Canis_lupus_dingo
ENSMODG00000005250RBMS110095.037ENSCHIG00000023380RBMS110095.037Capra_hircus
ENSMODG00000005250RBMS110093.842ENSTSYG00000005584RBMS110093.842Carlito_syrichta
ENSMODG00000005250RBMS110094.045ENSCPOG00000012310RBMS110094.045Cavia_porcellus
ENSMODG00000005250RBMS110093.842ENSCCAG00000033841RBMS110093.842Cebus_capucinus
ENSMODG00000005250RBMS110093.842ENSCATG00000043032RBMS110093.842Cercocebus_atys
ENSMODG00000005250RBMS110094.293ENSCLAG00000003031RBMS110094.293Chinchilla_lanigera
ENSMODG00000005250RBMS110093.842ENSCSAG00000015687RBMS110093.842Chlorocebus_sabaeus
ENSMODG00000005250RBMS15494.776ENSCHOG00000001579RBMS17394.776Choloepus_hoffmanni
ENSMODG00000005250RBMS110096.305ENSCPBG00000026455RBMS110096.305Chrysemys_picta_bellii
ENSMODG00000005250RBMS110093.842ENSCANG00000042152RBMS110093.842Colobus_angolensis_palliatus
ENSMODG00000005250RBMS110094.541ENSCGRG00001022833Rbms110094.541Cricetulus_griseus_chok1gshd
ENSMODG00000005250RBMS110094.541ENSCGRG00000008824Rbms110094.541Cricetulus_griseus_crigri
ENSMODG00000005250RBMS18963.056ENSCSEG00000000889rbms1a9063.081Cynoglossus_semilaevis
ENSMODG00000005250RBMS19475.130ENSCSEG00000010652RBMS19475.852Cynoglossus_semilaevis
ENSMODG00000005250RBMS19376.596ENSCVAG00000002027RBMS19677.841Cyprinodon_variegatus
ENSMODG00000005250RBMS18965.556ENSCVAG00000014698rbms1a8965.407Cyprinodon_variegatus
ENSMODG00000005250RBMS18773.864ENSDARG00000074023rbms1a8773.864Danio_rerio
ENSMODG00000005250RBMS18790.489ENSDNOG00000040691RBMS19590.489Dasypus_novemcinctus
ENSMODG00000005250RBMS110094.045ENSDORG00000007103Rbms110094.045Dipodomys_ordii
ENSMODG00000005250RBMS19481.890ENSETEG00000012135RBMS110081.890Echinops_telfairi
ENSMODG00000005250RBMS110090.995ENSEASG00005023132RBMS110090.995Equus_asinus_asinus
ENSMODG00000005250RBMS110094.581ENSECAG00000019894RBMS110094.581Equus_caballus
ENSMODG00000005250RBMS17996.117ENSEEUG00000005628RBMS17996.117Erinaceus_europaeus
ENSMODG00000005250RBMS19166.129ENSELUG00000018923rbms1a9567.422Esox_lucius
ENSMODG00000005250RBMS19372.105ENSELUG00000019328RBMS19472.105Esox_lucius
ENSMODG00000005250RBMS110093.596ENSFCAG00000012524RBMS110093.596Felis_catus
ENSMODG00000005250RBMS19296.216ENSFALG00000004440RBMS110096.216Ficedula_albicollis
ENSMODG00000005250RBMS110094.541ENSFDAG00000015692RBMS110094.541Fukomys_damarensis
ENSMODG00000005250RBMS18965.833ENSFHEG00000005662rbms1a7981.529Fundulus_heteroclitus
ENSMODG00000005250RBMS19375.266ENSFHEG00000000720RBMS18976.989Fundulus_heteroclitus
ENSMODG00000005250RBMS18262.974ENSGMOG00000000525rbms1a9961.972Gadus_morhua
ENSMODG00000005250RBMS19496.042ENSGALG00000011132RBMS110096.216Gallus_gallus
ENSMODG00000005250RBMS18965.556ENSGAFG00000011633rbms1a9565.698Gambusia_affinis
ENSMODG00000005250RBMS18776.989ENSGAFG00000007708RBMS18876.989Gambusia_affinis
ENSMODG00000005250RBMS18777.337ENSGACG00000005671RBMS18977.557Gasterosteus_aculeatus
ENSMODG00000005250RBMS18960.106ENSGACG00000015174rbms1a9166.563Gasterosteus_aculeatus
ENSMODG00000005250RBMS110096.059ENSGAGG00000007866RBMS110096.059Gopherus_agassizii
ENSMODG00000005250RBMS19590.625ENSGGOG00000043756-9590.625Gorilla_gorilla
ENSMODG00000005250RBMS19692.308ENSGGOG00000001264RBMS19893.438Gorilla_gorilla
ENSMODG00000005250RBMS18877.716ENSHBUG00000004516RBMS19477.716Haplochromis_burtoni
ENSMODG00000005250RBMS18665.029ENSHBUG00000004802rbms1a9065.217Haplochromis_burtoni
ENSMODG00000005250RBMS110093.797ENSHGLG00000010387RBMS110093.797Heterocephalus_glaber_female
ENSMODG00000005250RBMS19890.452ENSHGLG00100014105RBMS110089.848Heterocephalus_glaber_male
ENSMODG00000005250RBMS18964.167ENSHCOG00000020097rbms1a8964.244Hippocampus_comes
ENSMODG00000005250RBMS19374.734ENSHCOG00000016668RBMS19474.734Hippocampus_comes
ENSMODG00000005250RBMS110078.133ENSIPUG00000014677RBMS110076.167Ictalurus_punctatus
ENSMODG00000005250RBMS18774.432ENSIPUG00000010131RBMS18874.432Ictalurus_punctatus
ENSMODG00000005250RBMS110094.293ENSSTOG00000012501RBMS110094.293Ictidomys_tridecemlineatus
ENSMODG00000005250RBMS110093.797ENSJJAG00000016543Rbms110093.797Jaculus_jaculus
ENSMODG00000005250RBMS18963.712ENSKMAG00000011839-8963.768Kryptolebias_marmoratus
ENSMODG00000005250RBMS19378.989ENSKMAG00000013911RBMS19478.989Kryptolebias_marmoratus
ENSMODG00000005250RBMS18664.638ENSLBEG00000025962rbms1a8964.826Labrus_bergylta
ENSMODG00000005250RBMS19378.457ENSLBEG00000005787RBMS19478.457Labrus_bergylta
ENSMODG00000005250RBMS19979.512ENSLACG00000004324RBMS110078.351Latimeria_chalumnae
ENSMODG00000005250RBMS19883.123ENSLOCG00000008622rbms1a9685.117Lepisosteus_oculatus
ENSMODG00000005250RBMS19493.931ENSLAFG00000017217RBMS110093.931Loxodonta_africana
ENSMODG00000005250RBMS110093.842ENSMFAG00000000274RBMS110093.842Macaca_fascicularis
ENSMODG00000005250RBMS110093.842ENSMMUG00000016825RBMS110093.842Macaca_mulatta
ENSMODG00000005250RBMS110093.842ENSMNEG00000039425RBMS110093.842Macaca_nemestrina
ENSMODG00000005250RBMS19989.136ENSMLEG00000031517RBMS19993.455Mandrillus_leucophaeus
ENSMODG00000005250RBMS18963.333ENSMAMG00000005018rbms1a8963.372Mastacembelus_armatus
ENSMODG00000005250RBMS18778.187ENSMAMG00000003159-9278.632Mastacembelus_armatus
ENSMODG00000005250RBMS18178.659ENSMZEG00005007313RBMS19178.899Maylandia_zebra
ENSMODG00000005250RBMS18665.029ENSMZEG00005005661rbms1a9065.217Maylandia_zebra
ENSMODG00000005250RBMS19295.442ENSMGAG00000011054RBMS110095.442Meleagris_gallopavo
ENSMODG00000005250RBMS110094.789ENSMAUG00000008550Rbms110094.789Mesocricetus_auratus
ENSMODG00000005250RBMS110093.596ENSMICG00000008325RBMS110093.596Microcebus_murinus
ENSMODG00000005250RBMS110093.548ENSMOCG00000022617Rbms110093.548Microtus_ochrogaster
ENSMODG00000005250RBMS17469.128ENSMMOG00000018249rbms1a8169.463Mola_mola
ENSMODG00000005250RBMS19278.133ENSMMOG00000003707RBMS19478.133Mola_mola
ENSMODG00000005250RBMS18280.000ENSMALG00000015715-9078.409Monopterus_albus
ENSMODG00000005250RBMS18964.444ENSMALG00000014235rbms1a8964.535Monopterus_albus
ENSMODG00000005250RBMS110093.052MGP_CAROLIEiJ_G0023586Rbms110093.052Mus_caroli
ENSMODG00000005250RBMS110093.300ENSMUSG00000026970Rbms110093.300Mus_musculus
ENSMODG00000005250RBMS110092.556MGP_PahariEiJ_G0025037Rbms110092.556Mus_pahari
ENSMODG00000005250RBMS110093.300MGP_SPRETEiJ_G0024508Rbms110093.300Mus_spretus
ENSMODG00000005250RBMS110091.169ENSMPUG00000000539RBMS110091.169Mustela_putorius_furo
ENSMODG00000005250RBMS19986.635ENSMLUG00000008762RBMS19689.750Myotis_lucifugus
ENSMODG00000005250RBMS110094.045ENSNGAG00000013636Rbms110094.045Nannospalax_galili
ENSMODG00000005250RBMS17468.439ENSNBRG00000020217rbms1a8568.667Neolamprologus_brichardi
ENSMODG00000005250RBMS18774.221ENSNBRG00000015151RBMS19474.432Neolamprologus_brichardi
ENSMODG00000005250RBMS110093.596ENSNLEG00000001667RBMS110093.596Nomascus_leucogenys
ENSMODG00000005250RBMS17985.093ENSMEUG00000000746RBMS110085.093Notamacropus_eugenii
ENSMODG00000005250RBMS110086.700ENSOPRG00000012431RBMS110086.700Ochotona_princeps
ENSMODG00000005250RBMS110094.293ENSODEG00000013934RBMS110094.293Octodon_degus
ENSMODG00000005250RBMS19576.823ENSONIG00000008934RBMS19676.823Oreochromis_niloticus
ENSMODG00000005250RBMS18665.896ENSONIG00000003329rbms1a8866.087Oreochromis_niloticus
ENSMODG00000005250RBMS15356.485ENSOANG00000004477-9957.500Ornithorhynchus_anatinus
ENSMODG00000005250RBMS19497.375ENSOANG00000006166RBMS19697.375Ornithorhynchus_anatinus
ENSMODG00000005250RBMS19493.668ENSOCUG00000017365RBMS18993.668Oryctolagus_cuniculus
ENSMODG00000005250RBMS18963.611ENSORLG00000003917rbms1a9063.663Oryzias_latipes
ENSMODG00000005250RBMS18874.581ENSORLG00000016818RBMS18976.487Oryzias_latipes
ENSMODG00000005250RBMS18874.302ENSORLG00020022335RBMS18976.204Oryzias_latipes_hni
ENSMODG00000005250RBMS18963.333ENSORLG00020018663rbms1a9063.372Oryzias_latipes_hni
ENSMODG00000005250RBMS18874.860ENSORLG00015018208RBMS18976.771Oryzias_latipes_hsok
ENSMODG00000005250RBMS18963.611ENSORLG00015016556rbms1a9063.663Oryzias_latipes_hsok
ENSMODG00000005250RBMS18975.900ENSOMEG00000002394RBMS19474.868Oryzias_melastigma
ENSMODG00000005250RBMS18792.655ENSOGAG00000002900RBMS19492.655Otolemur_garnettii
ENSMODG00000005250RBMS110095.037ENSOARG00000006870RBMS110095.037Ovis_aries
ENSMODG00000005250RBMS19389.628ENSPPAG00000036520-9989.628Pan_paniscus
ENSMODG00000005250RBMS19692.308ENSPPAG00000040083RBMS110093.194Pan_paniscus
ENSMODG00000005250RBMS110093.596ENSPPRG00000005040RBMS110093.596Panthera_pardus
ENSMODG00000005250RBMS19493.438ENSPTIG00000021240RBMS19494.556Panthera_tigris_altaica
ENSMODG00000005250RBMS19589.896ENSPTRG00000039358-9989.870Pan_troglodytes
ENSMODG00000005250RBMS110093.596ENSPTRG00000052304RBMS110093.596Pan_troglodytes
ENSMODG00000005250RBMS110094.541ENSPANG00000001383RBMS110094.541Papio_anubis
ENSMODG00000005250RBMS110079.462ENSPKIG00000001498rbms1a10077.262Paramormyrops_kingsleyae
ENSMODG00000005250RBMS18779.887ENSPKIG00000012818rbms1a10076.296Paramormyrops_kingsleyae
ENSMODG00000005250RBMS110096.774ENSPSIG00000010240RBMS110096.774Pelodiscus_sinensis
ENSMODG00000005250RBMS18661.272ENSPMGG00000004341rbms1a9061.449Periophthalmus_magnuspinnatus
ENSMODG00000005250RBMS18177.946ENSPMGG00000006310RBMS19569.636Periophthalmus_magnuspinnatus
ENSMODG00000005250RBMS110094.293ENSPEMG00000009449Rbms110094.293Peromyscus_maniculatus_bairdii
ENSMODG00000005250RBMS1100100.000ENSPCIG00000018405RBMS1100100.000Phascolarctos_cinereus
ENSMODG00000005250RBMS19873.684ENSPFOG00000017483RBMS19476.862Poecilia_formosa
ENSMODG00000005250RBMS18965.556ENSPFOG00000016116rbms1a8965.698Poecilia_formosa
ENSMODG00000005250RBMS18776.989ENSPLAG00000000920RBMS18876.989Poecilia_latipinna
ENSMODG00000005250RBMS18965.556ENSPLAG00000013864rbms1a8965.698Poecilia_latipinna
ENSMODG00000005250RBMS18965.556ENSPMEG00000016185rbms1a8965.698Poecilia_mexicana
ENSMODG00000005250RBMS19376.862ENSPMEG00000015838RBMS19476.862Poecilia_mexicana
ENSMODG00000005250RBMS18965.556ENSPREG00000020161rbms1a8965.698Poecilia_reticulata
ENSMODG00000005250RBMS19377.128ENSPREG00000008146RBMS19477.128Poecilia_reticulata
ENSMODG00000005250RBMS110089.810ENSPPYG00000012879-10089.810Pongo_abelii
ENSMODG00000005250RBMS110088.177ENSPCAG00000009673RBMS110088.177Procavia_capensis
ENSMODG00000005250RBMS110093.596ENSPCOG00000027294RBMS110093.596Propithecus_coquereli
ENSMODG00000005250RBMS110082.759ENSPVAG00000010429RBMS110082.759Pteropus_vampyrus
ENSMODG00000005250RBMS19576.302ENSPNYG00000002643RBMS19676.302Pundamilia_nyererei
ENSMODG00000005250RBMS110076.471ENSPNAG00000023479RBMS110075.245Pygocentrus_nattereri
ENSMODG00000005250RBMS18773.864ENSPNAG00000010225rbms1a8873.864Pygocentrus_nattereri
ENSMODG00000005250RBMS110093.300ENSRNOG00000008482Rbms110093.300Rattus_norvegicus
ENSMODG00000005250RBMS110093.596ENSRBIG00000044262RBMS110093.596Rhinopithecus_bieti
ENSMODG00000005250RBMS110090.284ENSRROG00000043108RBMS19993.717Rhinopithecus_roxellana
ENSMODG00000005250RBMS19492.708ENSSBOG00000034705RBMS19992.708Saimiri_boliviensis_boliviensis
ENSMODG00000005250RBMS110099.752ENSSHAG00000012271RBMS110099.752Sarcophilus_harrisii
ENSMODG00000005250RBMS19980.988ENSSFOG00015022929rbms19980.000Scleropages_formosus
ENSMODG00000005250RBMS18779.545ENSSFOG00015014493rbms1a9579.545Scleropages_formosus
ENSMODG00000005250RBMS18664.348ENSSMAG00000012722rbms1a9564.535Scophthalmus_maximus
ENSMODG00000005250RBMS18776.771ENSSMAG00000012152RBMS19076.064Scophthalmus_maximus
ENSMODG00000005250RBMS18965.278ENSSDUG00000020602rbms1a9565.407Seriola_dumerili
ENSMODG00000005250RBMS19379.255ENSSDUG00000018803RBMS19479.255Seriola_dumerili
ENSMODG00000005250RBMS19378.989ENSSLDG00000016556RBMS19478.989Seriola_lalandi_dorsalis
ENSMODG00000005250RBMS18965.278ENSSLDG00000009495rbms1a8965.407Seriola_lalandi_dorsalis
ENSMODG00000005250RBMS110065.025ENSSARG00000011085RBMS110065.025Sorex_araneus
ENSMODG00000005250RBMS19295.722ENSSPUG00000017163RBMS110095.722Sphenodon_punctatus
ENSMODG00000005250RBMS19380.319ENSSPAG00000000059RBMS19480.319Stegastes_partitus
ENSMODG00000005250RBMS18664.638ENSSPAG00000005371rbms1a8964.826Stegastes_partitus
ENSMODG00000005250RBMS110091.408ENSSSCG00000015888RBMS110091.408Sus_scrofa
ENSMODG00000005250RBMS110096.526ENSTGUG00000006606RBMS110096.526Taeniopygia_guttata
ENSMODG00000005250RBMS18564.035ENSTRUG00000017155rbms1a8963.953Takifugu_rubripes
ENSMODG00000005250RBMS18776.836ENSTRUG00000005466-9674.611Takifugu_rubripes
ENSMODG00000005250RBMS19376.923ENSTNIG00000016496RBMS110076.923Tetraodon_nigroviridis
ENSMODG00000005250RBMS18762.393ENSTNIG00000009477rbms1a9962.654Tetraodon_nigroviridis
ENSMODG00000005250RBMS19484.252ENSTBEG00000016156RBMS110084.252Tupaia_belangeri
ENSMODG00000005250RBMS19494.226ENSTTRG00000011058RBMS110094.226Tursiops_truncatus
ENSMODG00000005250RBMS110094.045ENSUAMG00000022331RBMS110094.045Ursus_americanus
ENSMODG00000005250RBMS19493.684ENSUMAG00000008605RBMS19893.684Ursus_maritimus
ENSMODG00000005250RBMS19492.651ENSVPAG00000002716RBMS110091.601Vicugna_pacos
ENSMODG00000005250RBMS110090.931ENSVVUG00000018682RBMS110090.931Vulpes_vulpes
ENSMODG00000005250RBMS19485.379ENSXETG00000016204rbms110084.595Xenopus_tropicalis
ENSMODG00000005250RBMS18776.989ENSXCOG00000000211RBMS19576.989Xiphophorus_couchianus
ENSMODG00000005250RBMS18962.500ENSXCOG00000001659rbms1a8962.500Xiphophorus_couchianus
ENSMODG00000005250RBMS18965.556ENSXMAG00000001802rbms1a8965.698Xiphophorus_maculatus
ENSMODG00000005250RBMS19376.862ENSXMAG00000011405RBMS19476.862Xiphophorus_maculatus

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