EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000005584 (Gene tree)
Gene ID: 100013012
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 10614 bases
Position: chr3:431031143-431041756
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000006917	RRM_1	PF00076.22	5.4e-31	1	3
ENSMODP00000006917	RRM_1	PF00076.22	5.4e-31	2	3
ENSMODP00000006917	RRM_1	PF00076.22	5.4e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000007057	-	3204	-	ENSMODP00000006917	770 (aa)	-	F7E4I0

Gene Model

Click here to download ENSMODG00000005584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000005584's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000005584	-	63	50.860	ENSMODG00000001242	RAVER2	76	50.287

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000005584	-	91	77.402	ENSG00000161847	RAVER1	93	85.393	Homo_sapiens
ENSMODG00000005584	-	85	50.593	ENSAPOG00000017267	raver1	81	50.147	Acanthochromis_polyacanthus
ENSMODG00000005584	-	91	75.439	ENSAMEG00000011738	RAVER1	96	75.203	Ailuropoda_melanoleuca
ENSMODG00000005584	-	85	50.595	ENSAOCG00000005128	raver1	86	50.590	Amphiprion_ocellaris
ENSMODG00000005584	-	85	50.445	ENSAPEG00000010854	raver1	88	50.074	Amphiprion_percula
ENSMODG00000005584	-	87	50.808	ENSATEG00000021004	raver1	90	50.000	Anabas_testudineus
ENSMODG00000005584	-	76	67.476	ENSACAG00000008386	-	91	66.878	Anolis_carolinensis
ENSMODG00000005584	-	91	76.590	ENSANAG00000028226	RAVER1	96	76.902	Aotus_nancymaae
ENSMODG00000005584	-	85	51.729	ENSACLG00000018492	raver1	88	50.966	Astatotilapia_calliptera
ENSMODG00000005584	-	88	50.568	ENSAMXG00000005132	raver1	94	50.850	Astyanax_mexicanus
ENSMODG00000005584	-	91	78.212	ENSBTAG00000015721	RAVER1	96	83.028	Bos_taurus
ENSMODG00000005584	-	91	76.351	ENSCJAG00000005671	RAVER1	96	76.902	Callithrix_jacchus
ENSMODG00000005584	-	91	79.330	ENSCAFG00000017861	RAVER1	96	79.383	Canis_familiaris
ENSMODG00000005584	-	89	79.000	ENSCAFG00020024449	RAVER1	97	79.143	Canis_lupus_dingo
ENSMODG00000005584	-	89	72.276	ENSCHIG00000006718	RAVER1	89	83.648	Capra_hircus
ENSMODG00000005584	-	80	76.282	ENSTSYG00000027107	RAVER1	91	83.535	Carlito_syrichta
ENSMODG00000005584	-	79	73.960	ENSCAPG00000002269	RAVER1	96	74.308	Cavia_aperea
ENSMODG00000005584	-	89	75.657	ENSCPOG00000001008	RAVER1	97	75.657	Cavia_porcellus
ENSMODG00000005584	-	91	76.152	ENSCCAG00000031723	RAVER1	96	76.599	Cebus_capucinus
ENSMODG00000005584	-	91	77.673	ENSCATG00000043863	RAVER1	96	77.717	Cercocebus_atys
ENSMODG00000005584	-	89	74.621	ENSCLAG00000009336	RAVER1	97	74.621	Chinchilla_lanigera
ENSMODG00000005584	-	93	77.411	ENSCSAG00000007317	RAVER1	85	77.543	Chlorocebus_sabaeus
ENSMODG00000005584	-	87	66.486	ENSCPBG00000005349	-	96	66.214	Chrysemys_picta_bellii
ENSMODG00000005584	-	91	77.402	ENSCANG00000008337	RAVER1	96	77.446	Colobus_angolensis_palliatus
ENSMODG00000005584	-	89	74.518	ENSCGRG00001013260	-	97	74.931	Cricetulus_griseus_chok1gshd
ENSMODG00000005584	-	89	74.518	ENSCGRG00000015138	-	97	74.931	Cricetulus_griseus_crigri
ENSMODG00000005584	-	85	49.700	ENSCSEG00000021092	raver1	87	49.700	Cynoglossus_semilaevis
ENSMODG00000005584	-	87	50.729	ENSCVAG00000013971	raver1	89	50.145	Cyprinodon_variegatus
ENSMODG00000005584	-	87	51.580	ENSDARG00000052617	raver1	75	68.182	Danio_rerio
ENSMODG00000005584	-	63	77.654	ENSDNOG00000035742	-	71	75.397	Dasypus_novemcinctus
ENSMODG00000005584	-	89	68.928	ENSDORG00000010106	-	93	74.848	Dipodomys_ordii
ENSMODG00000005584	-	65	64.557	ENSETEG00000008201	-	76	81.910	Echinops_telfairi
ENSMODG00000005584	-	64	85.266	ENSEASG00005010544	-	89	85.266	Equus_asinus_asinus
ENSMODG00000005584	-	91	75.507	ENSECAG00000024966	RAVER1	96	76.423	Equus_caballus
ENSMODG00000005584	-	87	52.339	ENSELUG00000023287	raver1	89	51.613	Esox_lucius
ENSMODG00000005584	-	91	76.351	ENSFCAG00000009435	RAVER1	96	76.287	Felis_catus
ENSMODG00000005584	-	89	73.829	ENSFDAG00000015113	RAVER1	97	75.069	Fukomys_damarensis
ENSMODG00000005584	-	85	50.946	ENSGMOG00000003649	raver1	93	51.095	Gadus_morhua
ENSMODG00000005584	-	64	45.984	ENSGALG00000050608	-	56	43.866	Gallus_gallus
ENSMODG00000005584	-	91	50.346	ENSGAFG00000015944	raver1	91	50.000	Gambusia_affinis
ENSMODG00000005584	-	88	47.796	ENSGACG00000013818	raver1	96	48.309	Gasterosteus_aculeatus
ENSMODG00000005584	-	85	68.300	ENSGAGG00000011748	-	93	76.500	Gopherus_agassizii
ENSMODG00000005584	-	91	77.537	ENSGGOG00000006015	RAVER1	96	77.582	Gorilla_gorilla
ENSMODG00000005584	-	85	51.880	ENSHBUG00000021210	raver1	88	51.114	Haplochromis_burtoni
ENSMODG00000005584	-	89	73.619	ENSHGLG00000015460	RAVER1	97	75.000	Heterocephalus_glaber_female
ENSMODG00000005584	-	89	73.619	ENSHGLG00100000812	RAVER1	97	75.000	Heterocephalus_glaber_male
ENSMODG00000005584	-	86	51.556	ENSHCOG00000000449	raver1	86	51.684	Hippocampus_comes
ENSMODG00000005584	-	87	51.599	ENSIPUG00000013153	raver1	90	51.590	Ictalurus_punctatus
ENSMODG00000005584	-	89	75.900	ENSSTOG00000003241	RAVER1	97	75.900	Ictidomys_tridecemlineatus
ENSMODG00000005584	-	89	74.897	ENSJJAG00000018219	-	97	75.034	Jaculus_jaculus
ENSMODG00000005584	-	87	50.508	ENSKMAG00000017355	raver1	89	49.783	Kryptolebias_marmoratus
ENSMODG00000005584	-	80	51.108	ENSLBEG00000008268	raver1	86	50.874	Labrus_bergylta
ENSMODG00000005584	-	78	58.939	ENSLACG00000005809	-	96	60.181	Latimeria_chalumnae
ENSMODG00000005584	-	85	56.017	ENSLOCG00000007500	raver1	90	55.634	Lepisosteus_oculatus
ENSMODG00000005584	-	89	75.967	ENSLAFG00000003664	-	97	76.381	Loxodonta_africana
ENSMODG00000005584	-	91	77.267	ENSMFAG00000037977	RAVER1	96	77.310	Macaca_fascicularis
ENSMODG00000005584	-	91	77.402	ENSMMUG00000014897	RAVER1	96	77.446	Macaca_mulatta
ENSMODG00000005584	-	91	77.402	ENSMNEG00000028390	RAVER1	96	77.446	Macaca_nemestrina
ENSMODG00000005584	-	91	77.808	ENSMLEG00000041959	RAVER1	96	77.853	Mandrillus_leucophaeus
ENSMODG00000005584	-	87	50.441	ENSMAMG00000012059	raver1	90	50.583	Mastacembelus_armatus
ENSMODG00000005584	-	85	51.114	ENSMZEG00005019002	raver1	88	51.245	Maylandia_zebra
ENSMODG00000005584	-	89	73.967	ENSMAUG00000017948	-	97	74.518	Mesocricetus_auratus
ENSMODG00000005584	-	91	78.164	ENSMICG00000010326	RAVER1	96	79.215	Microcebus_murinus
ENSMODG00000005584	-	89	74.656	ENSMOCG00000015553	-	97	75.069	Microtus_ochrogaster
ENSMODG00000005584	-	88	49.855	ENSMMOG00000012093	raver1	88	49.706	Mola_mola
ENSMODG00000005584	-	87	49.927	ENSMALG00000016569	raver1	90	49.356	Monopterus_albus
ENSMODG00000005584	-	89	73.699	MGP_CAROLIEiJ_G0031860	-	97	74.110	Mus_caroli
ENSMODG00000005584	-	89	73.699	ENSMUSG00000010205	Raver1	97	74.110	Mus_musculus
ENSMODG00000005584	-	89	73.433	MGP_PahariEiJ_G0014726	-	97	74.114	Mus_pahari
ENSMODG00000005584	-	89	73.562	MGP_SPRETEiJ_G0032984	-	97	73.973	Mus_spretus
ENSMODG00000005584	-	91	76.383	ENSMPUG00000006712	RAVER1	96	76.152	Mustela_putorius_furo
ENSMODG00000005584	-	89	76.791	ENSMLUG00000012328	RAVER1	97	78.429	Myotis_lucifugus
ENSMODG00000005584	-	89	73.444	ENSNGAG00000001260	-	97	73.582	Nannospalax_galili
ENSMODG00000005584	-	85	45.030	ENSNBRG00000010139	raver1	87	45.601	Neolamprologus_brichardi
ENSMODG00000005584	-	91	76.829	ENSNLEG00000012181	RAVER1	96	76.902	Nomascus_leucogenys
ENSMODG00000005584	-	80	86.583	ENSMEUG00000003281	-	96	86.854	Notamacropus_eugenii
ENSMODG00000005584	-	89	73.895	ENSODEG00000016260	RAVER1	97	74.793	Octodon_degus
ENSMODG00000005584	-	85	51.026	ENSONIG00000001559	raver1	76	71.610	Oreochromis_niloticus
ENSMODG00000005584	-	91	70.285	ENSOCUG00000020918	RAVER1	96	71.175	Oryctolagus_cuniculus
ENSMODG00000005584	-	87	49.354	ENSORLG00000005458	raver1	56	66.262	Oryzias_latipes
ENSMODG00000005584	-	87	49.501	ENSORLG00020004392	raver1	90	48.286	Oryzias_latipes_hni
ENSMODG00000005584	-	82	50.302	ENSOMEG00000023956	raver1	61	66.748	Oryzias_melastigma
ENSMODG00000005584	-	91	76.255	ENSOGAG00000011071	RAVER1	96	76.158	Otolemur_garnettii
ENSMODG00000005584	-	91	71.892	ENSOARG00000015886	RAVER1	96	72.592	Ovis_aries
ENSMODG00000005584	-	91	77.402	ENSPPAG00000002611	RAVER1	96	77.446	Pan_paniscus
ENSMODG00000005584	-	91	76.788	ENSPPRG00000009912	RAVER1	96	76.558	Panthera_pardus
ENSMODG00000005584	-	91	77.402	ENSPTRG00000010466	RAVER1	96	77.446	Pan_troglodytes
ENSMODG00000005584	-	91	77.673	ENSPANG00000004122	RAVER1	96	77.717	Papio_anubis
ENSMODG00000005584	-	89	74.553	ENSPEMG00000016411	-	97	75.103	Peromyscus_maniculatus_bairdii
ENSMODG00000005584	-	89	94.253	ENSPCIG00000018695	-	97	94.253	Phascolarctos_cinereus
ENSMODG00000005584	-	87	51.375	ENSPFOG00000007016	raver1	89	51.297	Poecilia_formosa
ENSMODG00000005584	-	87	49.784	ENSPLAG00000020793	raver1	91	48.811	Poecilia_latipinna
ENSMODG00000005584	-	87	52.041	ENSPMEG00000011220	raver1	90	51.301	Poecilia_mexicana
ENSMODG00000005584	-	87	51.190	ENSPREG00000006864	raver1	88	50.000	Poecilia_reticulata
ENSMODG00000005584	-	93	75.726	ENSPPYG00000010514	RAVER1	85	76.385	Pongo_abelii
ENSMODG00000005584	-	91	75.908	ENSPCOG00000026605	RAVER1	96	75.946	Propithecus_coquereli
ENSMODG00000005584	-	89	75.766	ENSPVAG00000003689	RAVER1	97	76.389	Pteropus_vampyrus
ENSMODG00000005584	-	52	66.005	ENSPNYG00000013284	raver1	56	67.494	Pundamilia_nyererei
ENSMODG00000005584	-	87	51.799	ENSPNAG00000015476	raver1	90	52.000	Pygocentrus_nattereri
ENSMODG00000005584	-	89	74.384	ENSRNOG00000020710	Raver1	97	74.658	Rattus_norvegicus
ENSMODG00000005584	-	91	80.112	ENSRBIG00000034702	RAVER1	96	80.309	Rhinopithecus_bieti
ENSMODG00000005584	-	91	80.252	ENSRROG00000031186	RAVER1	96	80.309	Rhinopithecus_roxellana
ENSMODG00000005584	-	91	79.494	ENSSBOG00000023423	RAVER1	96	79.972	Saimiri_boliviensis_boliviensis
ENSMODG00000005584	-	80	95.114	ENSSHAG00000008181	-	87	95.425	Sarcophilus_harrisii
ENSMODG00000005584	-	88	47.458	ENSSMAG00000004546	raver1	93	47.318	Scophthalmus_maximus
ENSMODG00000005584	-	88	50.653	ENSSDUG00000021063	raver1	90	50.358	Seriola_dumerili
ENSMODG00000005584	-	94	48.853	ENSSLDG00000014505	raver1	90	50.143	Seriola_lalandi_dorsalis
ENSMODG00000005584	-	85	52.246	ENSSPAG00000000688	raver1	88	52.507	Stegastes_partitus
ENSMODG00000005584	-	89	79.370	ENSSSCG00000013650	-	96	79.656	Sus_scrofa
ENSMODG00000005584	-	85	51.114	ENSTRUG00000025641	raver1	88	50.817	Takifugu_rubripes
ENSMODG00000005584	-	89	76.144	ENSTTRG00000009552	RAVER1	97	76.838	Tursiops_truncatus
ENSMODG00000005584	-	91	77.328	ENSUAMG00000020385	RAVER1	96	77.100	Ursus_americanus
ENSMODG00000005584	-	91	79.050	ENSVVUG00000028976	RAVER1	96	79.102	Vulpes_vulpes
ENSMODG00000005584	-	86	57.918	ENSXETG00000011622	raver1	92	57.687	Xenopus_tropicalis
ENSMODG00000005584	-	88	50.935	ENSXCOG00000016368	raver1	90	49.928	Xiphophorus_couchianus
ENSMODG00000005584	-	88	51.009	ENSXMAG00000000217	raver1	90	50.000	Xiphophorus_maculatus