EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000005624 (Gene tree)
Gene ID: 100031451
Gene Symbol: POLR3F
Alias: RPC39|RPC6
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 25686 bases
Position: chr1:604342740-604368425
Accession: 100031451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000006963	RNA_pol_Rpc34	PF05158.12	7.2e-105	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000007103	POLR3F-201	951	-	ENSMODP00000006963	316 (aa)	XP_001374149	F7CFH9

Gene Model

Click here to download ENSMODG00000005624's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03020	RNA polymerase	KEGG
mdo04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000005624's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000005624	POLR3F	100	98.101	ENSG00000132664	POLR3F	100	98.101	Homo_sapiens
ENSMODG00000005624	POLR3F	100	85.759	ENSAPOG00000008271	polr3f	100	85.759	Acanthochromis_polyacanthus
ENSMODG00000005624	POLR3F	100	97.785	ENSAMEG00000005222	POLR3F	100	97.785	Ailuropoda_melanoleuca
ENSMODG00000005624	POLR3F	100	81.013	ENSACIG00000006705	polr3f	100	81.013	Amphilophus_citrinellus
ENSMODG00000005624	POLR3F	100	86.709	ENSAOCG00000000687	polr3f	100	86.709	Amphiprion_ocellaris
ENSMODG00000005624	POLR3F	100	86.392	ENSAPEG00000015263	polr3f	100	86.392	Amphiprion_percula
ENSMODG00000005624	POLR3F	87	89.818	ENSATEG00000015539	polr3f	100	89.818	Anabas_testudineus
ENSMODG00000005624	POLR3F	87	96.364	ENSAPLG00000005533	POLR3F	100	96.364	Anas_platyrhynchos
ENSMODG00000005624	POLR3F	98	91.909	ENSACAG00000014293	POLR3F	99	91.909	Anolis_carolinensis
ENSMODG00000005624	POLR3F	100	97.785	ENSANAG00000026726	POLR3F	100	97.785	Aotus_nancymaae
ENSMODG00000005624	POLR3F	100	87.342	ENSACLG00000003615	polr3f	100	87.342	Astatotilapia_calliptera
ENSMODG00000005624	POLR3F	100	87.342	ENSAMXG00000036020	polr3f	100	87.342	Astyanax_mexicanus
ENSMODG00000005624	POLR3F	100	98.101	ENSBTAG00000008825	POLR3F	100	98.101	Bos_taurus
ENSMODG00000005624	POLR3F	94	34.114	WBGene00021112	W09C3.4	95	34.114	Caenorhabditis_elegans
ENSMODG00000005624	POLR3F	100	97.785	ENSCJAG00000005159	POLR3F	100	97.785	Callithrix_jacchus
ENSMODG00000005624	POLR3F	100	97.468	ENSCAFG00000005420	POLR3F	100	97.468	Canis_familiaris
ENSMODG00000005624	POLR3F	100	97.468	ENSCAFG00020027500	POLR3F	100	97.468	Canis_lupus_dingo
ENSMODG00000005624	POLR3F	100	98.101	ENSCHIG00000014743	POLR3F	100	98.101	Capra_hircus
ENSMODG00000005624	POLR3F	100	97.785	ENSTSYG00000004207	POLR3F	100	97.785	Carlito_syrichta
ENSMODG00000005624	POLR3F	93	56.081	ENSCAPG00000008423	POLR3F	100	56.081	Cavia_aperea
ENSMODG00000005624	POLR3F	100	97.152	ENSCPOG00000002400	POLR3F	100	97.152	Cavia_porcellus
ENSMODG00000005624	POLR3F	100	86.709	ENSCCAG00000021800	POLR3F	100	86.709	Cebus_capucinus
ENSMODG00000005624	POLR3F	100	98.418	ENSCATG00000019507	POLR3F	100	98.418	Cercocebus_atys
ENSMODG00000005624	POLR3F	100	97.785	ENSCLAG00000016296	POLR3F	100	97.785	Chinchilla_lanigera
ENSMODG00000005624	POLR3F	100	98.418	ENSCSAG00000011513	POLR3F	100	98.418	Chlorocebus_sabaeus
ENSMODG00000005624	POLR3F	73	97.753	ENSCHOG00000013268	POLR3F	73	97.753	Choloepus_hoffmanni
ENSMODG00000005624	POLR3F	87	94.909	ENSCPBG00000023473	POLR3F	100	94.909	Chrysemys_picta_bellii
ENSMODG00000005624	POLR3F	96	62.706	ENSCING00000001212	-	95	62.706	Ciona_intestinalis
ENSMODG00000005624	POLR3F	71	59.556	ENSCSAVG00000003340	-	96	66.272	Ciona_savignyi
ENSMODG00000005624	POLR3F	92	98.282	ENSCANG00000037390	POLR3F	100	98.282	Colobus_angolensis_palliatus
ENSMODG00000005624	POLR3F	100	97.468	ENSCGRG00001002032	Polr3f	100	97.468	Cricetulus_griseus_chok1gshd
ENSMODG00000005624	POLR3F	100	97.468	ENSCGRG00000010852	Polr3f	100	97.468	Cricetulus_griseus_crigri
ENSMODG00000005624	POLR3F	100	84.810	ENSCSEG00000001247	polr3f	100	84.810	Cynoglossus_semilaevis
ENSMODG00000005624	POLR3F	100	84.494	ENSCVAG00000007611	polr3f	100	84.494	Cyprinodon_variegatus
ENSMODG00000005624	POLR3F	100	87.975	ENSDARG00000012572	polr3f	100	87.975	Danio_rerio
ENSMODG00000005624	POLR3F	100	94.620	ENSDNOG00000010719	POLR3F	100	94.620	Dasypus_novemcinctus
ENSMODG00000005624	POLR3F	100	97.785	ENSDORG00000016352	Polr3f	100	97.785	Dipodomys_ordii
ENSMODG00000005624	POLR3F	95	48.667	FBgn0038951	CG5380	99	48.667	Drosophila_melanogaster
ENSMODG00000005624	POLR3F	89	59.786	ENSETEG00000015485	-	100	59.786	Echinops_telfairi
ENSMODG00000005624	POLR3F	96	77.228	ENSEBUG00000006783	polr3f	97	77.228	Eptatretus_burgeri
ENSMODG00000005624	POLR3F	100	98.101	ENSEASG00005002022	POLR3F	100	98.101	Equus_asinus_asinus
ENSMODG00000005624	POLR3F	100	98.101	ENSECAG00000009920	POLR3F	100	98.101	Equus_caballus
ENSMODG00000005624	POLR3F	80	92.000	ENSEEUG00000000184	POLR3F	80	92.000	Erinaceus_europaeus
ENSMODG00000005624	POLR3F	100	88.924	ENSELUG00000001558	polr3f	100	88.924	Esox_lucius
ENSMODG00000005624	POLR3F	100	97.785	ENSFCAG00000013828	POLR3F	100	97.785	Felis_catus
ENSMODG00000005624	POLR3F	87	95.273	ENSFALG00000007623	POLR3F	100	95.273	Ficedula_albicollis
ENSMODG00000005624	POLR3F	100	97.468	ENSFDAG00000002528	POLR3F	100	97.468	Fukomys_damarensis
ENSMODG00000005624	POLR3F	100	82.911	ENSFHEG00000006450	polr3f	100	82.911	Fundulus_heteroclitus
ENSMODG00000005624	POLR3F	100	94.937	ENSGALG00000008749	POLR3F	100	94.937	Gallus_gallus
ENSMODG00000005624	POLR3F	100	84.494	ENSGAFG00000003698	polr3f	100	84.494	Gambusia_affinis
ENSMODG00000005624	POLR3F	100	93.671	ENSGAGG00000006151	POLR3F	100	93.671	Gopherus_agassizii
ENSMODG00000005624	POLR3F	100	98.101	ENSGGOG00000011543	POLR3F	100	98.101	Gorilla_gorilla
ENSMODG00000005624	POLR3F	100	87.658	ENSHBUG00000013806	polr3f	100	87.658	Haplochromis_burtoni
ENSMODG00000005624	POLR3F	100	97.468	ENSHGLG00000011867	POLR3F	100	97.468	Heterocephalus_glaber_female
ENSMODG00000005624	POLR3F	100	97.468	ENSHGLG00100012577	POLR3F	100	97.468	Heterocephalus_glaber_male
ENSMODG00000005624	POLR3F	100	76.266	ENSHCOG00000011751	polr3f	100	76.266	Hippocampus_comes
ENSMODG00000005624	POLR3F	100	86.709	ENSIPUG00000013347	polr3f	100	86.709	Ictalurus_punctatus
ENSMODG00000005624	POLR3F	100	97.785	ENSSTOG00000013588	POLR3F	100	97.785	Ictidomys_tridecemlineatus
ENSMODG00000005624	POLR3F	100	97.152	ENSJJAG00000017513	Polr3f	100	97.152	Jaculus_jaculus
ENSMODG00000005624	POLR3F	87	82.182	ENSKMAG00000016495	polr3f	100	82.182	Kryptolebias_marmoratus
ENSMODG00000005624	POLR3F	73	92.241	ENSLBEG00000011998	polr3f	100	92.241	Labrus_bergylta
ENSMODG00000005624	POLR3F	100	89.557	ENSLACG00000009371	POLR3F	100	89.557	Latimeria_chalumnae
ENSMODG00000005624	POLR3F	100	89.873	ENSLOCG00000015701	polr3f	100	89.873	Lepisosteus_oculatus
ENSMODG00000005624	POLR3F	100	97.785	ENSLAFG00000004929	POLR3F	100	97.785	Loxodonta_africana
ENSMODG00000005624	POLR3F	100	98.418	ENSMFAG00000002227	POLR3F	100	98.418	Macaca_fascicularis
ENSMODG00000005624	POLR3F	87	98.545	ENSMMUG00000004143	POLR3F	100	98.545	Macaca_mulatta
ENSMODG00000005624	POLR3F	100	98.418	ENSMNEG00000033404	POLR3F	100	98.418	Macaca_nemestrina
ENSMODG00000005624	POLR3F	100	98.418	ENSMLEG00000021905	POLR3F	100	98.418	Mandrillus_leucophaeus
ENSMODG00000005624	POLR3F	100	86.709	ENSMAMG00000017975	polr3f	100	86.709	Mastacembelus_armatus
ENSMODG00000005624	POLR3F	100	87.658	ENSMZEG00005015134	polr3f	100	87.658	Maylandia_zebra
ENSMODG00000005624	POLR3F	100	94.620	ENSMGAG00000006691	POLR3F	100	94.620	Meleagris_gallopavo
ENSMODG00000005624	POLR3F	100	97.785	ENSMAUG00000020176	Polr3f	100	97.785	Mesocricetus_auratus
ENSMODG00000005624	POLR3F	100	97.785	ENSMICG00000044519	POLR3F	100	97.785	Microcebus_murinus
ENSMODG00000005624	POLR3F	100	96.835	ENSMOCG00000018352	Polr3f	100	96.835	Microtus_ochrogaster
ENSMODG00000005624	POLR3F	93	88.552	ENSMMOG00000018477	polr3f	100	88.552	Mola_mola
ENSMODG00000005624	POLR3F	100	87.658	ENSMALG00000006685	polr3f	100	87.658	Monopterus_albus
ENSMODG00000005624	POLR3F	100	96.835	MGP_CAROLIEiJ_G0024385	Polr3f	100	96.835	Mus_caroli
ENSMODG00000005624	POLR3F	100	96.835	ENSMUSG00000027427	Polr3f	100	96.835	Mus_musculus
ENSMODG00000005624	POLR3F	100	96.835	MGP_PahariEiJ_G0025829	Polr3f	100	96.835	Mus_pahari
ENSMODG00000005624	POLR3F	100	96.835	MGP_SPRETEiJ_G0025304	Polr3f	100	96.835	Mus_spretus
ENSMODG00000005624	POLR3F	100	75.692	ENSMPUG00000001252	-	100	75.692	Mustela_putorius_furo
ENSMODG00000005624	POLR3F	100	97.785	ENSMLUG00000014844	POLR3F	100	97.785	Myotis_lucifugus
ENSMODG00000005624	POLR3F	100	97.152	ENSNGAG00000010898	Polr3f	100	97.152	Nannospalax_galili
ENSMODG00000005624	POLR3F	100	87.975	ENSNBRG00000020796	polr3f	100	87.975	Neolamprologus_brichardi
ENSMODG00000005624	POLR3F	100	98.101	ENSNLEG00000009778	POLR3F	100	98.101	Nomascus_leucogenys
ENSMODG00000005624	POLR3F	93	93.559	ENSMEUG00000010320	POLR3F	100	93.559	Notamacropus_eugenii
ENSMODG00000005624	POLR3F	100	95.570	ENSOPRG00000003385	POLR3F	100	95.570	Ochotona_princeps
ENSMODG00000005624	POLR3F	100	97.468	ENSODEG00000011521	POLR3F	100	97.468	Octodon_degus
ENSMODG00000005624	POLR3F	100	86.392	ENSONIG00000006858	polr3f	100	86.392	Oreochromis_niloticus
ENSMODG00000005624	POLR3F	100	97.785	ENSOANG00000001253	POLR3F	100	97.785	Ornithorhynchus_anatinus
ENSMODG00000005624	POLR3F	100	98.101	ENSOCUG00000015067	POLR3F	100	98.101	Oryctolagus_cuniculus
ENSMODG00000005624	POLR3F	100	83.861	ENSORLG00000022412	polr3f	100	83.861	Oryzias_latipes
ENSMODG00000005624	POLR3F	100	83.861	ENSORLG00020021944	polr3f	100	83.861	Oryzias_latipes_hni
ENSMODG00000005624	POLR3F	100	96.203	ENSOGAG00000002916	POLR3F	100	96.203	Otolemur_garnettii
ENSMODG00000005624	POLR3F	100	98.101	ENSOARG00000000315	-	100	98.101	Ovis_aries
ENSMODG00000005624	POLR3F	100	62.342	ENSOARG00000008647	-	100	62.342	Ovis_aries
ENSMODG00000005624	POLR3F	100	98.101	ENSPPAG00000036681	POLR3F	100	98.101	Pan_paniscus
ENSMODG00000005624	POLR3F	100	97.785	ENSPPRG00000024604	POLR3F	100	97.785	Panthera_pardus
ENSMODG00000005624	POLR3F	100	97.785	ENSPTIG00000020292	POLR3F	100	97.785	Panthera_tigris_altaica
ENSMODG00000005624	POLR3F	100	98.101	ENSPTRG00000013287	POLR3F	100	98.101	Pan_troglodytes
ENSMODG00000005624	POLR3F	100	98.418	ENSPANG00000025015	POLR3F	100	98.418	Papio_anubis
ENSMODG00000005624	POLR3F	100	87.975	ENSPKIG00000004427	polr3f	100	87.975	Paramormyrops_kingsleyae
ENSMODG00000005624	POLR3F	87	96.000	ENSPSIG00000016613	POLR3F	100	96.000	Pelodiscus_sinensis
ENSMODG00000005624	POLR3F	100	53.918	ENSPMGG00000018350	polr3f	100	56.013	Periophthalmus_magnuspinnatus
ENSMODG00000005624	POLR3F	100	97.152	ENSPEMG00000006966	Polr3f	100	97.152	Peromyscus_maniculatus_bairdii
ENSMODG00000005624	POLR3F	100	79.114	ENSPMAG00000005530	polr3f	100	79.114	Petromyzon_marinus
ENSMODG00000005624	POLR3F	100	99.684	ENSPCIG00000000908	POLR3F	85	99.684	Phascolarctos_cinereus
ENSMODG00000005624	POLR3F	100	84.494	ENSPFOG00000018334	polr3f	100	84.494	Poecilia_formosa
ENSMODG00000005624	POLR3F	100	84.494	ENSPLAG00000021803	polr3f	100	84.494	Poecilia_latipinna
ENSMODG00000005624	POLR3F	100	84.494	ENSPMEG00000013150	polr3f	100	84.494	Poecilia_mexicana
ENSMODG00000005624	POLR3F	100	84.494	ENSPREG00000005278	polr3f	100	84.494	Poecilia_reticulata
ENSMODG00000005624	POLR3F	100	98.101	ENSPPYG00000010737	POLR3F	100	98.101	Pongo_abelii
ENSMODG00000005624	POLR3F	66	98.649	ENSPCAG00000004893	POLR3F	71	98.649	Procavia_capensis
ENSMODG00000005624	POLR3F	100	97.785	ENSPCOG00000004543	POLR3F	100	97.785	Propithecus_coquereli
ENSMODG00000005624	POLR3F	100	97.468	ENSPVAG00000000403	POLR3F	100	97.468	Pteropus_vampyrus
ENSMODG00000005624	POLR3F	100	87.658	ENSPNYG00000016276	polr3f	100	87.658	Pundamilia_nyererei
ENSMODG00000005624	POLR3F	100	87.975	ENSPNAG00000005164	polr3f	100	87.975	Pygocentrus_nattereri
ENSMODG00000005624	POLR3F	100	97.152	ENSRNOG00000007548	Polr3f	85	97.152	Rattus_norvegicus
ENSMODG00000005624	POLR3F	100	98.418	ENSRBIG00000021268	POLR3F	100	98.418	Rhinopithecus_bieti
ENSMODG00000005624	POLR3F	100	98.418	ENSRROG00000039911	POLR3F	100	98.418	Rhinopithecus_roxellana
ENSMODG00000005624	POLR3F	69	30.667	YNR003C	RPC34	71	30.667	Saccharomyces_cerevisiae
ENSMODG00000005624	POLR3F	100	97.785	ENSSBOG00000018207	POLR3F	100	97.785	Saimiri_boliviensis_boliviensis
ENSMODG00000005624	POLR3F	100	77.603	ENSSHAG00000018160	POLR3F	100	77.603	Sarcophilus_harrisii
ENSMODG00000005624	POLR3F	100	89.241	ENSSFOG00015022433	polr3f	100	89.241	Scleropages_formosus
ENSMODG00000005624	POLR3F	100	86.076	ENSSMAG00000021029	polr3f	100	86.076	Scophthalmus_maximus
ENSMODG00000005624	POLR3F	100	76.899	ENSSDUG00000022435	polr3f	100	76.899	Seriola_dumerili
ENSMODG00000005624	POLR3F	100	86.709	ENSSLDG00000012761	polr3f	100	86.709	Seriola_lalandi_dorsalis
ENSMODG00000005624	POLR3F	100	88.291	ENSSARG00000006039	POLR3F	100	88.291	Sorex_araneus
ENSMODG00000005624	POLR3F	100	94.937	ENSSPUG00000001873	POLR3F	100	94.937	Sphenodon_punctatus
ENSMODG00000005624	POLR3F	100	78.481	ENSSPAG00000002092	polr3f	100	78.481	Stegastes_partitus
ENSMODG00000005624	POLR3F	100	97.468	ENSSSCG00000007095	POLR3F	100	98.276	Sus_scrofa
ENSMODG00000005624	POLR3F	100	93.038	ENSTGUG00000005839	POLR3F	100	93.038	Taeniopygia_guttata
ENSMODG00000005624	POLR3F	100	85.443	ENSTRUG00000012101	polr3f	100	85.443	Takifugu_rubripes
ENSMODG00000005624	POLR3F	100	84.177	ENSTNIG00000006456	polr3f	100	84.177	Tetraodon_nigroviridis
ENSMODG00000005624	POLR3F	100	81.646	ENSTBEG00000007921	POLR3F	100	81.646	Tupaia_belangeri
ENSMODG00000005624	POLR3F	100	98.101	ENSTTRG00000002580	POLR3F	100	98.101	Tursiops_truncatus
ENSMODG00000005624	POLR3F	53	97.590	ENSUAMG00000024166	POLR3F	100	97.590	Ursus_americanus
ENSMODG00000005624	POLR3F	100	97.468	ENSUMAG00000024944	POLR3F	100	97.468	Ursus_maritimus
ENSMODG00000005624	POLR3F	100	96.835	ENSVPAG00000009063	POLR3F	100	96.835	Vicugna_pacos
ENSMODG00000005624	POLR3F	100	97.468	ENSVVUG00000012925	POLR3F	100	97.468	Vulpes_vulpes
ENSMODG00000005624	POLR3F	100	88.924	ENSXETG00000024898	polr3f	100	88.924	Xenopus_tropicalis
ENSMODG00000005624	POLR3F	87	86.909	ENSXCOG00000010301	polr3f	100	86.909	Xiphophorus_couchianus
ENSMODG00000005624	POLR3F	100	84.810	ENSXMAG00000004604	polr3f	100	84.810	Xiphophorus_maculatus