EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000005826 (Gene tree)
Gene ID: 100018811
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 180871 bases
Position: chr6:116066817-116247687
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000007208	Fox-1_C	PF12414.8	3.7e-41	1	1
ENSMODP00000007208	RRM_1	PF00076.22	3.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000007356	RBFOX1-201	4704	-	ENSMODP00000007208	354 (aa)	-	F6U1W3

Gene Model

Click here to download ENSMODG00000005826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000005826's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000005826	RBFOX1	79	72.500	ENSMODG00000002089	RBFOX3	82	71.914
ENSMODG00000005826	RBFOX1	81	68.182	ENSMODG00000001122	RBFOX2	82	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000005826	RBFOX1	100	97.740	ENSG00000078328	RBFOX1	92	97.531	Homo_sapiens
ENSMODG00000005826	RBFOX1	90	73.512	ENSAPOG00000003197	rbfox1	80	73.214	Acanthochromis_polyacanthus
ENSMODG00000005826	RBFOX1	59	95.238	ENSAMEG00000008605	RBFOX1	84	95.238	Ailuropoda_melanoleuca
ENSMODG00000005826	RBFOX1	62	68.675	ENSACIG00000005478	rbfox1	56	68.675	Amphilophus_citrinellus
ENSMODG00000005826	RBFOX1	78	72.109	ENSAOCG00000008283	rbfox1	91	71.769	Amphiprion_ocellaris
ENSMODG00000005826	RBFOX1	90	65.421	ENSAPEG00000010636	rbfox1	82	68.707	Amphiprion_percula
ENSMODG00000005826	RBFOX1	78	70.946	ENSATEG00000007513	rbfox1	91	70.608	Anabas_testudineus
ENSMODG00000005826	RBFOX1	90	95.611	ENSAPLG00000013263	RBFOX1	80	95.611	Anas_platyrhynchos
ENSMODG00000005826	RBFOX1	90	85.404	ENSACAG00000004013	RBFOX1	81	85.404	Anolis_carolinensis
ENSMODG00000005826	RBFOX1	100	97.458	ENSANAG00000029527	RBFOX1	94	92.655	Aotus_nancymaae
ENSMODG00000005826	RBFOX1	60	90.995	ENSAMXG00000002431	rbfox1	68	82.008	Astyanax_mexicanus
ENSMODG00000005826	RBFOX1	100	97.175	ENSBTAG00000007210	RBFOX1	94	97.175	Bos_taurus
ENSMODG00000005826	RBFOX1	100	97.175	ENSCJAG00000017351	RBFOX1	86	91.808	Callithrix_jacchus
ENSMODG00000005826	RBFOX1	100	95.775	ENSCAFG00000019082	RBFOX1	90	95.775	Canis_familiaris
ENSMODG00000005826	RBFOX1	100	83.333	ENSCAFG00020024881	RBFOX1	89	83.616	Canis_lupus_dingo
ENSMODG00000005826	RBFOX1	100	97.740	ENSCHIG00000023549	RBFOX1	94	97.740	Capra_hircus
ENSMODG00000005826	RBFOX1	100	97.175	ENSTSYG00000005334	RBFOX1	97	91.808	Carlito_syrichta
ENSMODG00000005826	RBFOX1	90	94.357	ENSCAPG00000017669	RBFOX1	82	94.357	Cavia_aperea
ENSMODG00000005826	RBFOX1	90	94.357	ENSCPOG00000011314	RBFOX1	81	94.357	Cavia_porcellus
ENSMODG00000005826	RBFOX1	100	97.458	ENSCCAG00000023031	RBFOX1	93	92.090	Cebus_capucinus
ENSMODG00000005826	RBFOX1	100	97.740	ENSCATG00000033816	RBFOX1	94	92.938	Cercocebus_atys
ENSMODG00000005826	RBFOX1	100	96.610	ENSCLAG00000012761	RBFOX1	94	96.610	Chinchilla_lanigera
ENSMODG00000005826	RBFOX1	100	97.740	ENSCSAG00000008739	RBFOX1	94	97.740	Chlorocebus_sabaeus
ENSMODG00000005826	RBFOX1	65	88.745	ENSCHOG00000012843	RBFOX1	55	88.745	Choloepus_hoffmanni
ENSMODG00000005826	RBFOX1	100	97.175	ENSCPBG00000026626	RBFOX1	94	97.175	Chrysemys_picta_bellii
ENSMODG00000005826	RBFOX1	100	97.740	ENSCANG00000033125	RBFOX1	86	92.373	Colobus_angolensis_palliatus
ENSMODG00000005826	RBFOX1	90	94.357	ENSCGRG00001013729	Rbfox1	80	94.357	Cricetulus_griseus_chok1gshd
ENSMODG00000005826	RBFOX1	90	94.357	ENSCGRG00000003272	Rbfox1	80	94.357	Cricetulus_griseus_crigri
ENSMODG00000005826	RBFOX1	90	67.847	ENSCSEG00000008840	rbfox1	84	67.847	Cynoglossus_semilaevis
ENSMODG00000005826	RBFOX1	90	79.375	ENSDARG00000014746	rbfox1	100	87.317	Danio_rerio
ENSMODG00000005826	RBFOX1	90	95.298	ENSDNOG00000043612	RBFOX1	77	95.298	Dasypus_novemcinctus
ENSMODG00000005826	RBFOX1	90	92.236	ENSDORG00000010024	Rbfox1	83	92.236	Dipodomys_ordii
ENSMODG00000005826	RBFOX1	90	68.750	ENSETEG00000003771	RBFOX1	76	68.750	Echinops_telfairi
ENSMODG00000005826	RBFOX1	100	95.493	ENSEASG00005011599	RBFOX1	90	95.493	Equus_asinus_asinus
ENSMODG00000005826	RBFOX1	100	97.458	ENSECAG00000012667	RBFOX1	94	97.458	Equus_caballus
ENSMODG00000005826	RBFOX1	72	68.919	ENSELUG00000013096	rbfox1	72	68.919	Esox_lucius
ENSMODG00000005826	RBFOX1	100	97.740	ENSFCAG00000025322	RBFOX1	94	97.740	Felis_catus
ENSMODG00000005826	RBFOX1	88	97.428	ENSFALG00000004027	RBFOX1	93	97.428	Ficedula_albicollis
ENSMODG00000005826	RBFOX1	90	94.984	ENSFDAG00000007388	RBFOX1	80	94.984	Fukomys_damarensis
ENSMODG00000005826	RBFOX1	100	97.175	ENSGALG00000034325	RBFOX1	93	97.175	Gallus_gallus
ENSMODG00000005826	RBFOX1	100	96.893	ENSGAGG00000023681	RBFOX1	94	94.648	Gopherus_agassizii
ENSMODG00000005826	RBFOX1	100	97.740	ENSGGOG00000016871	-	86	92.373	Gorilla_gorilla
ENSMODG00000005826	RBFOX1	100	96.893	ENSHGLG00000016944	RBFOX1	94	96.893	Heterocephalus_glaber_female
ENSMODG00000005826	RBFOX1	100	96.893	ENSHGLG00100003272	RBFOX1	94	96.893	Heterocephalus_glaber_male
ENSMODG00000005826	RBFOX1	90	68.389	ENSHCOG00000016419	rbfox1	86	68.389	Hippocampus_comes
ENSMODG00000005826	RBFOX1	100	83.898	ENSIPUG00000015215	rbfox1	94	83.898	Ictalurus_punctatus
ENSMODG00000005826	RBFOX1	100	96.610	ENSSTOG00000000322	RBFOX1	94	96.610	Ictidomys_tridecemlineatus
ENSMODG00000005826	RBFOX1	90	91.223	ENSJJAG00000002575	Rbfox1	80	91.223	Jaculus_jaculus
ENSMODG00000005826	RBFOX1	90	70.536	ENSLBEG00000014659	rbfox1	86	70.536	Labrus_bergylta
ENSMODG00000005826	RBFOX1	90	86.957	ENSLOCG00000006675	rbfox1	81	86.957	Lepisosteus_oculatus
ENSMODG00000005826	RBFOX1	70	95.600	ENSLAFG00000011480	RBFOX1	81	95.600	Loxodonta_africana
ENSMODG00000005826	RBFOX1	100	97.458	ENSMFAG00000036447	RBFOX1	94	87.955	Macaca_fascicularis
ENSMODG00000005826	RBFOX1	100	97.458	ENSMMUG00000003458	RBFOX1	96	97.458	Macaca_mulatta
ENSMODG00000005826	RBFOX1	100	97.458	ENSMNEG00000032034	RBFOX1	83	97.458	Macaca_nemestrina
ENSMODG00000005826	RBFOX1	100	97.740	ENSMLEG00000015382	RBFOX1	86	92.373	Mandrillus_leucophaeus
ENSMODG00000005826	RBFOX1	90	70.958	ENSMAMG00000003142	rbfox1	91	70.890	Mastacembelus_armatus
ENSMODG00000005826	RBFOX1	76	90.706	ENSMGAG00000008606	RBFOX1	91	90.530	Meleagris_gallopavo
ENSMODG00000005826	RBFOX1	82	60.690	ENSMAUG00000020570	Rbfox1	76	60.345	Mesocricetus_auratus
ENSMODG00000005826	RBFOX1	100	97.175	ENSMICG00000034286	RBFOX1	94	94.930	Microcebus_murinus
ENSMODG00000005826	RBFOX1	90	94.357	ENSMOCG00000020932	Rbfox1	83	94.357	Microtus_ochrogaster
ENSMODG00000005826	RBFOX1	90	70.405	ENSMMOG00000009716	rbfox1	80	70.093	Mola_mola
ENSMODG00000005826	RBFOX1	90	73.030	ENSMALG00000003337	rbfox1	79	73.030	Monopterus_albus
ENSMODG00000005826	RBFOX1	100	96.610	MGP_CAROLIEiJ_G0020427	Rbfox1	83	96.610	Mus_caroli
ENSMODG00000005826	RBFOX1	90	94.357	ENSMUSG00000008658	Rbfox1	93	96.296	Mus_musculus
ENSMODG00000005826	RBFOX1	100	96.610	MGP_PahariEiJ_G0016135	Rbfox1	83	96.610	Mus_pahari
ENSMODG00000005826	RBFOX1	100	96.045	MGP_SPRETEiJ_G0021321	Rbfox1	83	96.045	Mus_spretus
ENSMODG00000005826	RBFOX1	100	97.458	ENSMPUG00000014822	RBFOX1	90	97.458	Mustela_putorius_furo
ENSMODG00000005826	RBFOX1	70	95.582	ENSMLUG00000015896	RBFOX1	81	95.582	Myotis_lucifugus
ENSMODG00000005826	RBFOX1	90	94.984	ENSNGAG00000023276	Rbfox1	82	94.984	Nannospalax_galili
ENSMODG00000005826	RBFOX1	94	56.497	ENSNBRG00000011084	rbfox1	79	56.497	Neolamprologus_brichardi
ENSMODG00000005826	RBFOX1	100	97.458	ENSNLEG00000010017	-	75	95.298	Nomascus_leucogenys
ENSMODG00000005826	RBFOX1	66	100.000	ENSMEUG00000012525	RBFOX1	56	100.000	Notamacropus_eugenii
ENSMODG00000005826	RBFOX1	86	80.195	ENSOPRG00000006199	-	74	80.195	Ochotona_princeps
ENSMODG00000005826	RBFOX1	90	93.730	ENSODEG00000013166	RBFOX1	81	93.730	Octodon_degus
ENSMODG00000005826	RBFOX1	100	99.153	ENSOANG00000002379	RBFOX1	94	99.153	Ornithorhynchus_anatinus
ENSMODG00000005826	RBFOX1	58	96.098	ENSOCUG00000001205	-	91	96.098	Oryctolagus_cuniculus
ENSMODG00000005826	RBFOX1	90	95.298	ENSOGAG00000025535	RBFOX1	80	95.298	Otolemur_garnettii
ENSMODG00000005826	RBFOX1	65	85.714	ENSOARG00000005135	RBFOX1	91	85.714	Ovis_aries
ENSMODG00000005826	RBFOX1	100	97.740	ENSPPAG00000036238	-	97	95.493	Pan_paniscus
ENSMODG00000005826	RBFOX1	100	97.740	ENSPPRG00000006546	RBFOX1	86	92.373	Panthera_pardus
ENSMODG00000005826	RBFOX1	100	79.944	ENSPTIG00000021154	RBFOX1	89	77.183	Panthera_tigris_altaica
ENSMODG00000005826	RBFOX1	100	97.740	ENSPTRG00000007744	RBFOX1	86	92.373	Pan_troglodytes
ENSMODG00000005826	RBFOX1	100	97.740	ENSPANG00000026500	RBFOX1	94	92.938	Papio_anubis
ENSMODG00000005826	RBFOX1	79	85.663	ENSPKIG00000019353	rbfox1	82	85.663	Paramormyrops_kingsleyae
ENSMODG00000005826	RBFOX1	100	84.551	ENSPKIG00000009667	-	95	85.112	Paramormyrops_kingsleyae
ENSMODG00000005826	RBFOX1	90	95.611	ENSPSIG00000006523	RBFOX1	80	95.611	Pelodiscus_sinensis
ENSMODG00000005826	RBFOX1	90	94.671	ENSPEMG00000017607	Rbfox1	80	94.671	Peromyscus_maniculatus_bairdii
ENSMODG00000005826	RBFOX1	75	94.382	ENSPCIG00000026887	RBFOX1	84	94.382	Phascolarctos_cinereus
ENSMODG00000005826	RBFOX1	100	97.740	ENSPPYG00000007079	-	90	97.740	Pongo_abelii
ENSMODG00000005826	RBFOX1	90	84.062	ENSPCAG00000002630	RBFOX1	85	84.062	Procavia_capensis
ENSMODG00000005826	RBFOX1	100	97.175	ENSPCOG00000025687	RBFOX1	94	92.373	Propithecus_coquereli
ENSMODG00000005826	RBFOX1	82	93.772	ENSPVAG00000013467	RBFOX1	69	93.772	Pteropus_vampyrus
ENSMODG00000005826	RBFOX1	90	78.994	ENSPNAG00000023109	rbfox1	84	78.994	Pygocentrus_nattereri
ENSMODG00000005826	RBFOX1	100	94.085	ENSRNOG00000002827	Rbfox1	94	94.085	Rattus_norvegicus
ENSMODG00000005826	RBFOX1	100	97.740	ENSRBIG00000044478	RBFOX1	94	97.740	Rhinopithecus_bieti
ENSMODG00000005826	RBFOX1	100	97.740	ENSRROG00000044411	RBFOX1	90	95.493	Rhinopithecus_roxellana
ENSMODG00000005826	RBFOX1	100	97.175	ENSSBOG00000033726	RBFOX1	90	97.175	Saimiri_boliviensis_boliviensis
ENSMODG00000005826	RBFOX1	100	89.859	ENSSHAG00000009257	RBFOX1	100	89.859	Sarcophilus_harrisii
ENSMODG00000005826	RBFOX1	88	70.533	ENSSFOG00015009955	-	76	69.419	Scleropages_formosus
ENSMODG00000005826	RBFOX1	64	87.013	ENSSFOG00015023675	rbfox1	67	87.013	Scleropages_formosus
ENSMODG00000005826	RBFOX1	90	73.433	ENSSMAG00000015505	rbfox1	86	73.134	Scophthalmus_maximus
ENSMODG00000005826	RBFOX1	90	70.497	ENSSDUG00000016413	rbfox1	79	72.240	Seriola_dumerili
ENSMODG00000005826	RBFOX1	90	70.497	ENSSLDG00000009353	rbfox1	91	73.016	Seriola_lalandi_dorsalis
ENSMODG00000005826	RBFOX1	90	82.298	ENSSPUG00000009732	RBFOX1	93	76.177	Sphenodon_punctatus
ENSMODG00000005826	RBFOX1	88	74.390	ENSSPAG00000009723	rbfox1	79	74.085	Stegastes_partitus
ENSMODG00000005826	RBFOX1	100	97.175	ENSSSCG00000007917	RBFOX1	100	97.175	Sus_scrofa
ENSMODG00000005826	RBFOX1	90	95.611	ENSTGUG00000004562	RBFOX1	82	95.611	Taeniopygia_guttata
ENSMODG00000005826	RBFOX1	90	73.134	ENSTRUG00000020940	rbfox1	86	72.836	Takifugu_rubripes
ENSMODG00000005826	RBFOX1	70	54.730	ENSTNIG00000002567	rbfox1	93	56.419	Tetraodon_nigroviridis
ENSMODG00000005826	RBFOX1	68	76.033	ENSTBEG00000009169	-	58	76.033	Tupaia_belangeri
ENSMODG00000005826	RBFOX1	88	94.231	ENSTTRG00000005700	RBFOX1	76	92.476	Tursiops_truncatus
ENSMODG00000005826	RBFOX1	100	92.938	ENSUAMG00000024633	RBFOX1	89	92.938	Ursus_americanus
ENSMODG00000005826	RBFOX1	100	83.051	ENSUMAG00000003579	RBFOX1	89	83.051	Ursus_maritimus
ENSMODG00000005826	RBFOX1	68	94.628	ENSVPAG00000001284	RBFOX1	58	94.628	Vicugna_pacos
ENSMODG00000005826	RBFOX1	100	97.740	ENSVVUG00000017311	RBFOX1	94	97.740	Vulpes_vulpes