EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000005897 (Gene tree)
Gene ID: 100009876
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 8103 bases
Position: chr5:62542002-62550104
Accession: 100009876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000003463	Gar1	PF04410.14	1.9e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000003540	GAR1-201	730	-	ENSMODP00000003463	238 (aa)	XP_001362130	F7E2W1

Gene Model

Click here to download ENSMODG00000005897's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000005897's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000005897	GAR1	55	88.636	ENSAMEG00000004605	GAR1	56	88.596	Ailuropoda_melanoleuca
ENSMODG00000005897	GAR1	67	69.182	ENSAOCG00000020947	gar1	53	87.719	Amphiprion_ocellaris
ENSMODG00000005897	GAR1	67	69.182	ENSAPEG00000001676	gar1	53	87.719	Amphiprion_percula
ENSMODG00000005897	GAR1	78	70.811	ENSATEG00000003733	gar1	53	87.719	Anabas_testudineus
ENSMODG00000005897	GAR1	71	76.471	ENSACLG00000010029	gar1	51	86.842	Astatotilapia_calliptera
ENSMODG00000005897	GAR1	58	70.290	ENSCHIG00000011049	-	57	77.193	Capra_hircus
ENSMODG00000005897	GAR1	54	79.845	ENSCHIG00000016026	-	55	89.474	Capra_hircus
ENSMODG00000005897	GAR1	71	63.690	ENSTSYG00000026632	-	55	84.259	Carlito_syrichta
ENSMODG00000005897	GAR1	51	94.215	ENSCHOG00000007484	-	51	94.215	Choloepus_hoffmanni
ENSMODG00000005897	GAR1	66	74.051	ENSCPBG00000004310	GAR1	55	88.889	Chrysemys_picta_bellii
ENSMODG00000005897	GAR1	65	54.194	ENSCING00000005744	-	51	67.961	Ciona_intestinalis
ENSMODG00000005897	GAR1	81	90.991	ENSCSEG00000003525	gar1	51	86.842	Cynoglossus_semilaevis
ENSMODG00000005897	GAR1	60	76.056	ENSDARG00000076526	gar1	51	85.965	Danio_rerio
ENSMODG00000005897	GAR1	55	90.840	ENSDNOG00000037632	GAR1	68	91.729	Dasypus_novemcinctus
ENSMODG00000005897	GAR1	85	53.793	FBgn0011824	CG4038	65	55.752	Drosophila_melanogaster
ENSMODG00000005897	GAR1	76	69.231	ENSELUG00000021108	gar1	50	86.486	Esox_lucius
ENSMODG00000005897	GAR1	76	84.559	ENSFHEG00000008068	gar1	68	80.822	Fundulus_heteroclitus
ENSMODG00000005897	GAR1	82	83.444	ENSGAFG00000016833	gar1	72	76.331	Gambusia_affinis
ENSMODG00000005897	GAR1	66	74.051	ENSGAGG00000004393	GAR1	54	89.623	Gopherus_agassizii
ENSMODG00000005897	GAR1	82	69.925	ENSGGOG00000036205	-	54	75.000	Gorilla_gorilla
ENSMODG00000005897	GAR1	97	80.000	ENSKMAG00000010402	gar1	57	85.124	Kryptolebias_marmoratus
ENSMODG00000005897	GAR1	62	78.400	ENSLACG00000003306	GAR1	66	85.455	Latimeria_chalumnae
ENSMODG00000005897	GAR1	57	90.991	ENSMAMG00000017583	gar1	51	87.611	Mastacembelus_armatus
ENSMODG00000005897	GAR1	71	76.471	ENSMZEG00005001281	gar1	51	86.842	Maylandia_zebra
ENSMODG00000005897	GAR1	53	82.540	ENSMAUG00000016788	Gar1	70	96.364	Mesocricetus_auratus
ENSMODG00000005897	GAR1	55	85.385	MGP_CAROLIEiJ_G0025627	Gar1	70	98.182	Mus_caroli
ENSMODG00000005897	GAR1	53	82.540	ENSMUSG00000028010	Gar1	70	98.182	Mus_musculus
ENSMODG00000005897	GAR1	53	83.333	MGP_PahariEiJ_G0027076	Gar1	70	98.182	Mus_pahari
ENSMODG00000005897	GAR1	53	82.540	MGP_SPRETEiJ_G0026580	Gar1	70	98.182	Mus_spretus
ENSMODG00000005897	GAR1	68	69.565	ENSNBRG00000014828	gar1	50	86.842	Neolamprologus_brichardi
ENSMODG00000005897	GAR1	80	74.453	ENSNLEG00000034282	-	58	74.561	Nomascus_leucogenys
ENSMODG00000005897	GAR1	66	70.886	ENSPSIG00000002970	GAR1	50	88.889	Pelodiscus_sinensis
ENSMODG00000005897	GAR1	69	72.656	ENSPCAG00000015897	GAR1	80	78.030	Procavia_capensis
ENSMODG00000005897	GAR1	68	81.988	ENSSBOG00000024785	GAR1	53	89.474	Saimiri_boliviensis_boliviensis
ENSMODG00000005897	GAR1	54	75.969	ENSSMAG00000009976	gar1	52	85.088	Scophthalmus_maximus
ENSMODG00000005897	GAR1	67	68.553	ENSSLDG00000023264	gar1	54	86.842	Seriola_lalandi_dorsalis
ENSMODG00000005897	GAR1	71	92.105	ENSSPAG00000005974	gar1	50	87.719	Stegastes_partitus
ENSMODG00000005897	GAR1	70	71.084	ENSSSCG00000009137	GAR1	56	89.474	Sus_scrofa
ENSMODG00000005897	GAR1	69	65.455	ENSTRUG00000020580	gar1	55	84.211	Takifugu_rubripes
ENSMODG00000005897	GAR1	76	67.582	ENSTNIG00000013023	gar1	65	86.842	Tetraodon_nigroviridis
ENSMODG00000005897	GAR1	68	74.847	ENSUMAG00000000776	GAR1	55	89.474	Ursus_maritimus