EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000005940 (Gene tree)
Gene ID: 100012751
Gene Symbol: TRUB2
Alias: CLONE24922
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 15786 bases
Position: chr1:454056778-454072563
Accession: 17170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000007344	TruB_N	PF01509.18	5.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000007493	TRUB2-201	888	-	ENSMODP00000007344	296 (aa)	-	F6WW62

Gene Model

Click here to download ENSMODG00000005940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000005940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000005940	TRUB2	97	31.164	ENSMODG00000009676	TRUB1	70	31.164

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000005940	TRUB2	99	75.342	ENSG00000167112	TRUB2	88	75.342	Homo_sapiens
ENSMODG00000005940	TRUB2	95	42.349	ENSAPOG00000018284	-	78	42.349	Acanthochromis_polyacanthus
ENSMODG00000005940	TRUB2	70	55.825	ENSAPOG00000015733	trub2	75	55.825	Acanthochromis_polyacanthus
ENSMODG00000005940	TRUB2	99	72.945	ENSAMEG00000015395	TRUB2	88	72.945	Ailuropoda_melanoleuca
ENSMODG00000005940	TRUB2	94	52.143	ENSACIG00000016500	trub2	85	52.143	Amphilophus_citrinellus
ENSMODG00000005940	TRUB2	95	55.516	ENSAOCG00000002330	trub2	82	55.516	Amphiprion_ocellaris
ENSMODG00000005940	TRUB2	95	55.872	ENSAPEG00000013177	trub2	82	55.872	Amphiprion_percula
ENSMODG00000005940	TRUB2	95	52.297	ENSATEG00000011371	trub2	89	52.297	Anabas_testudineus
ENSMODG00000005940	TRUB2	100	60.403	ENSAPLG00000009254	TRUB2	97	61.409	Anas_platyrhynchos
ENSMODG00000005940	TRUB2	97	68.182	ENSACAG00000007331	TRUB2	87	68.182	Anolis_carolinensis
ENSMODG00000005940	TRUB2	98	76.897	ENSANAG00000036234	TRUB2	93	76.897	Aotus_nancymaae
ENSMODG00000005940	TRUB2	94	52.500	ENSACLG00000010793	trub2	85	52.500	Astatotilapia_calliptera
ENSMODG00000005940	TRUB2	94	55.914	ENSAMXG00000031679	trub2	80	55.914	Astyanax_mexicanus
ENSMODG00000005940	TRUB2	54	70.625	ENSBTAG00000004663	TRUB2	98	70.625	Bos_taurus
ENSMODG00000005940	TRUB2	98	76.207	ENSCJAG00000020009	TRUB2	88	76.207	Callithrix_jacchus
ENSMODG00000005940	TRUB2	98	73.793	ENSCAFG00000020068	TRUB2	88	73.793	Canis_familiaris
ENSMODG00000005940	TRUB2	58	71.512	ENSCAFG00020017325	-	97	71.512	Canis_lupus_dingo
ENSMODG00000005940	TRUB2	99	77.055	ENSCHIG00000021160	TRUB2	88	77.055	Capra_hircus
ENSMODG00000005940	TRUB2	99	76.712	ENSTSYG00000034163	TRUB2	88	76.712	Carlito_syrichta
ENSMODG00000005940	TRUB2	88	71.815	ENSCAPG00000000223	TRUB2	88	71.815	Cavia_aperea
ENSMODG00000005940	TRUB2	99	72.945	ENSCPOG00000013535	TRUB2	90	71.839	Cavia_porcellus
ENSMODG00000005940	TRUB2	98	76.552	ENSCCAG00000026531	-	89	76.552	Cebus_capucinus
ENSMODG00000005940	TRUB2	98	73.793	ENSCCAG00000028463	-	88	73.793	Cebus_capucinus
ENSMODG00000005940	TRUB2	99	75.685	ENSCATG00000038234	TRUB2	88	75.685	Cercocebus_atys
ENSMODG00000005940	TRUB2	99	72.945	ENSCLAG00000001702	TRUB2	98	65.969	Chinchilla_lanigera
ENSMODG00000005940	TRUB2	99	70.990	ENSCSAG00000014117	TRUB2	88	70.990	Chlorocebus_sabaeus
ENSMODG00000005940	TRUB2	99	72.881	ENSCHOG00000001555	TRUB2	89	72.881	Choloepus_hoffmanni
ENSMODG00000005940	TRUB2	98	66.207	ENSCPBG00000025186	TRUB2	85	66.207	Chrysemys_picta_bellii
ENSMODG00000005940	TRUB2	99	33.887	ENSCSAVG00000003930	-	92	33.887	Ciona_savignyi
ENSMODG00000005940	TRUB2	99	66.438	ENSCANG00000016135	TRUB2	87	66.438	Colobus_angolensis_palliatus
ENSMODG00000005940	TRUB2	99	72.603	ENSCGRG00001024441	Trub2	95	67.614	Cricetulus_griseus_chok1gshd
ENSMODG00000005940	TRUB2	99	72.603	ENSCGRG00000005633	Trub2	88	72.603	Cricetulus_griseus_crigri
ENSMODG00000005940	TRUB2	95	52.500	ENSCSEG00000001331	trub2	84	52.500	Cynoglossus_semilaevis
ENSMODG00000005940	TRUB2	95	52.857	ENSCVAG00000009901	trub2	84	52.857	Cyprinodon_variegatus
ENSMODG00000005940	TRUB2	94	53.763	ENSDARG00000028379	trub2	79	53.763	Danio_rerio
ENSMODG00000005940	TRUB2	99	73.630	ENSDNOG00000045679	-	88	73.630	Dasypus_novemcinctus
ENSMODG00000005940	TRUB2	86	54.902	ENSDNOG00000043967	-	78	54.902	Dasypus_novemcinctus
ENSMODG00000005940	TRUB2	98	72.759	ENSDORG00000016222	Trub2	91	72.759	Dipodomys_ordii
ENSMODG00000005940	TRUB2	96	31.724	FBgn0033060	CG7849	91	31.724	Drosophila_melanogaster
ENSMODG00000005940	TRUB2	99	72.203	ENSETEG00000009114	TRUB2	91	72.203	Echinops_telfairi
ENSMODG00000005940	TRUB2	79	47.761	ENSEBUG00000015723	trub2	81	47.761	Eptatretus_burgeri
ENSMODG00000005940	TRUB2	99	75.685	ENSEASG00005016819	TRUB2	88	75.685	Equus_asinus_asinus
ENSMODG00000005940	TRUB2	99	76.027	ENSECAG00000023520	TRUB2	88	76.027	Equus_caballus
ENSMODG00000005940	TRUB2	99	74.315	ENSEEUG00000008908	TRUB2	89	74.315	Erinaceus_europaeus
ENSMODG00000005940	TRUB2	95	53.401	ENSELUG00000002376	trub2	92	53.401	Esox_lucius
ENSMODG00000005940	TRUB2	98	75.862	ENSFCAG00000005839	TRUB2	90	75.862	Felis_catus
ENSMODG00000005940	TRUB2	89	64.885	ENSFALG00000001364	TRUB2	84	65.267	Ficedula_albicollis
ENSMODG00000005940	TRUB2	99	73.559	ENSFDAG00000021374	TRUB2	91	73.596	Fukomys_damarensis
ENSMODG00000005940	TRUB2	95	49.291	ENSFHEG00000014655	trub2	83	49.291	Fundulus_heteroclitus
ENSMODG00000005940	TRUB2	93	46.739	ENSGMOG00000000981	trub2	92	46.739	Gadus_morhua
ENSMODG00000005940	TRUB2	97	65.035	ENSGALG00000004920	TRUB2	70	65.035	Gallus_gallus
ENSMODG00000005940	TRUB2	94	54.610	ENSGAFG00000010107	trub2	85	54.007	Gambusia_affinis
ENSMODG00000005940	TRUB2	95	53.737	ENSGACG00000001476	trub2	85	53.737	Gasterosteus_aculeatus
ENSMODG00000005940	TRUB2	97	67.014	ENSGAGG00000022872	TRUB2	85	67.014	Gopherus_agassizii
ENSMODG00000005940	TRUB2	99	75.342	ENSGGOG00000014780	TRUB2	88	75.342	Gorilla_gorilla
ENSMODG00000005940	TRUB2	94	52.857	ENSHBUG00000022384	trub2	85	52.857	Haplochromis_burtoni
ENSMODG00000005940	TRUB2	99	74.658	ENSHGLG00000016715	TRUB2	88	74.658	Heterocephalus_glaber_female
ENSMODG00000005940	TRUB2	99	74.658	ENSHGLG00100016548	TRUB2	88	74.658	Heterocephalus_glaber_male
ENSMODG00000005940	TRUB2	95	54.286	ENSHCOG00000017748	trub2	86	54.286	Hippocampus_comes
ENSMODG00000005940	TRUB2	99	74.061	ENSSTOG00000022617	-	89	74.061	Ictidomys_tridecemlineatus
ENSMODG00000005940	TRUB2	99	73.630	ENSSTOG00000008024	-	98	66.842	Ictidomys_tridecemlineatus
ENSMODG00000005940	TRUB2	99	65.753	ENSJJAG00000019181	Trub2	87	65.753	Jaculus_jaculus
ENSMODG00000005940	TRUB2	94	51.613	ENSKMAG00000007861	trub2	83	51.613	Kryptolebias_marmoratus
ENSMODG00000005940	TRUB2	94	52.688	ENSLBEG00000000907	trub2	82	52.688	Labrus_bergylta
ENSMODG00000005940	TRUB2	99	63.823	ENSLACG00000001515	TRUB2	87	63.823	Latimeria_chalumnae
ENSMODG00000005940	TRUB2	99	56.856	ENSLOCG00000000885	trub2	99	56.856	Lepisosteus_oculatus
ENSMODG00000005940	TRUB2	99	75.342	ENSLAFG00000002174	TRUB2	96	75.342	Loxodonta_africana
ENSMODG00000005940	TRUB2	99	75.685	ENSMFAG00000000881	TRUB2	88	75.685	Macaca_fascicularis
ENSMODG00000005940	TRUB2	99	75.685	ENSMMUG00000014146	TRUB2	88	75.685	Macaca_mulatta
ENSMODG00000005940	TRUB2	99	75.342	ENSMNEG00000011189	TRUB2	88	75.342	Macaca_nemestrina
ENSMODG00000005940	TRUB2	99	76.027	ENSMLEG00000037270	TRUB2	88	76.027	Mandrillus_leucophaeus
ENSMODG00000005940	TRUB2	94	54.448	ENSMAMG00000023643	trub2	93	54.448	Mastacembelus_armatus
ENSMODG00000005940	TRUB2	94	52.857	ENSMZEG00005016018	trub2	85	52.857	Maylandia_zebra
ENSMODG00000005940	TRUB2	67	70.558	ENSMGAG00000003894	TRUB2	99	70.558	Meleagris_gallopavo
ENSMODG00000005940	TRUB2	99	72.945	ENSMAUG00000010403	Trub2	96	65.775	Mesocricetus_auratus
ENSMODG00000005940	TRUB2	98	75.517	ENSMICG00000047032	TRUB2	88	75.517	Microcebus_murinus
ENSMODG00000005940	TRUB2	99	73.630	ENSMOCG00000014291	Trub2	96	73.630	Microtus_ochrogaster
ENSMODG00000005940	TRUB2	95	51.957	ENSMMOG00000021674	trub2	86	51.957	Mola_mola
ENSMODG00000005940	TRUB2	94	56.338	ENSMALG00000021231	trub2	84	56.338	Monopterus_albus
ENSMODG00000005940	TRUB2	99	73.288	MGP_CAROLIEiJ_G0023368	Trub2	88	73.288	Mus_caroli
ENSMODG00000005940	TRUB2	99	73.973	ENSMUSG00000039826	Trub2	88	73.973	Mus_musculus
ENSMODG00000005940	TRUB2	99	73.630	MGP_PahariEiJ_G0024826	Trub2	88	73.630	Mus_pahari
ENSMODG00000005940	TRUB2	99	73.288	MGP_SPRETEiJ_G0024286	Trub2	96	66.845	Mus_spretus
ENSMODG00000005940	TRUB2	99	72.260	ENSMPUG00000013206	TRUB2	80	72.260	Mustela_putorius_furo
ENSMODG00000005940	TRUB2	99	77.055	ENSMLUG00000005256	TRUB2	88	77.055	Myotis_lucifugus
ENSMODG00000005940	TRUB2	99	72.945	ENSNGAG00000018679	Trub2	89	72.945	Nannospalax_galili
ENSMODG00000005940	TRUB2	94	52.500	ENSNBRG00000016294	trub2	85	52.500	Neolamprologus_brichardi
ENSMODG00000005940	TRUB2	99	74.315	ENSNLEG00000017556	TRUB2	88	74.315	Nomascus_leucogenys
ENSMODG00000005940	TRUB2	97	87.500	ENSMEUG00000000484	TRUB2	93	87.500	Notamacropus_eugenii
ENSMODG00000005940	TRUB2	99	70.205	ENSOPRG00000001981	TRUB2	88	70.205	Ochotona_princeps
ENSMODG00000005940	TRUB2	99	72.945	ENSODEG00000017292	TRUB2	90	72.945	Octodon_degus
ENSMODG00000005940	TRUB2	94	52.857	ENSONIG00000004230	trub2	85	52.857	Oreochromis_niloticus
ENSMODG00000005940	TRUB2	63	75.936	ENSOANG00000029023	-	83	75.936	Ornithorhynchus_anatinus
ENSMODG00000005940	TRUB2	99	73.973	ENSOCUG00000026296	TRUB2	82	73.244	Oryctolagus_cuniculus
ENSMODG00000005940	TRUB2	94	51.254	ENSORLG00000020011	trub2	84	51.971	Oryzias_latipes
ENSMODG00000005940	TRUB2	94	51.799	ENSORLG00020011028	trub2	81	52.158	Oryzias_latipes_hni
ENSMODG00000005940	TRUB2	94	51.079	ENSORLG00015007494	trub2	85	52.158	Oryzias_latipes_hsok
ENSMODG00000005940	TRUB2	96	54.035	ENSOMEG00000006702	trub2	87	54.035	Oryzias_melastigma
ENSMODG00000005940	TRUB2	53	69.231	ENSOGAG00000003511	-	95	69.231	Otolemur_garnettii
ENSMODG00000005940	TRUB2	73	78.802	ENSOARG00000003785	-	86	78.802	Ovis_aries
ENSMODG00000005940	TRUB2	99	76.949	ENSOARG00000010579	-	89	76.949	Ovis_aries
ENSMODG00000005940	TRUB2	99	76.027	ENSPPAG00000043146	TRUB2	88	76.027	Pan_paniscus
ENSMODG00000005940	TRUB2	99	74.744	ENSPPRG00000006307	TRUB2	91	74.744	Panthera_pardus
ENSMODG00000005940	TRUB2	98	75.862	ENSPTIG00000012366	TRUB2	90	75.862	Panthera_tigris_altaica
ENSMODG00000005940	TRUB2	99	75.685	ENSPTRG00000021423	TRUB2	88	75.685	Pan_troglodytes
ENSMODG00000005940	TRUB2	99	75.685	ENSPTRG00000052151	-	88	75.685	Pan_troglodytes
ENSMODG00000005940	TRUB2	99	76.027	ENSPANG00000025856	TRUB2	88	76.027	Papio_anubis
ENSMODG00000005940	TRUB2	94	52.688	ENSPKIG00000019769	trub2	91	52.688	Paramormyrops_kingsleyae
ENSMODG00000005940	TRUB2	99	61.224	ENSPSIG00000015701	TRUB2	98	61.224	Pelodiscus_sinensis
ENSMODG00000005940	TRUB2	96	54.514	ENSPMGG00000010206	trub2	90	54.514	Periophthalmus_magnuspinnatus
ENSMODG00000005940	TRUB2	99	72.696	ENSPEMG00000017893	Trub2	94	68.571	Peromyscus_maniculatus_bairdii
ENSMODG00000005940	TRUB2	99	87.372	ENSPCIG00000026731	TRUB2	95	87.372	Phascolarctos_cinereus
ENSMODG00000005940	TRUB2	94	53.901	ENSPFOG00000018018	trub2	75	53.147	Poecilia_formosa
ENSMODG00000005940	TRUB2	94	53.901	ENSPLAG00000010484	trub2	81	53.147	Poecilia_latipinna
ENSMODG00000005940	TRUB2	98	52.381	ENSPMEG00000012913	trub2	87	52.381	Poecilia_mexicana
ENSMODG00000005940	TRUB2	94	52.500	ENSPREG00000002549	trub2	84	51.930	Poecilia_reticulata
ENSMODG00000005940	TRUB2	99	73.973	ENSPPYG00000019650	TRUB2	90	73.973	Pongo_abelii
ENSMODG00000005940	TRUB2	98	75.172	ENSPCAG00000015068	TRUB2	89	75.172	Procavia_capensis
ENSMODG00000005940	TRUB2	98	75.172	ENSPCOG00000017100	TRUB2	88	75.172	Propithecus_coquereli
ENSMODG00000005940	TRUB2	92	76.103	ENSPVAG00000001224	TRUB2	91	76.103	Pteropus_vampyrus
ENSMODG00000005940	TRUB2	94	52.857	ENSPNYG00000013666	trub2	85	52.857	Pundamilia_nyererei
ENSMODG00000005940	TRUB2	93	53.791	ENSPNAG00000017292	trub2	79	53.791	Pygocentrus_nattereri
ENSMODG00000005940	TRUB2	99	72.260	ENSRNOG00000043189	Trub2	90	72.260	Rattus_norvegicus
ENSMODG00000005940	TRUB2	99	67.466	ENSRBIG00000006965	TRUB2	87	67.466	Rhinopithecus_bieti
ENSMODG00000005940	TRUB2	99	75.685	ENSRROG00000042928	TRUB2	88	75.685	Rhinopithecus_roxellana
ENSMODG00000005940	TRUB2	99	75.000	ENSSBOG00000022439	TRUB2	89	75.000	Saimiri_boliviensis_boliviensis
ENSMODG00000005940	TRUB2	93	56.159	ENSSFOG00015013391	trub2	88	56.159	Scleropages_formosus
ENSMODG00000005940	TRUB2	95	54.804	ENSSMAG00000020820	trub2	85	54.804	Scophthalmus_maximus
ENSMODG00000005940	TRUB2	95	53.737	ENSSDUG00000016928	trub2	84	53.737	Seriola_dumerili
ENSMODG00000005940	TRUB2	95	54.448	ENSSLDG00000024701	trub2	84	54.448	Seriola_lalandi_dorsalis
ENSMODG00000005940	TRUB2	99	66.438	ENSSPUG00000015515	TRUB2	87	66.438	Sphenodon_punctatus
ENSMODG00000005940	TRUB2	95	56.028	ENSSPAG00000017865	trub2	85	56.028	Stegastes_partitus
ENSMODG00000005940	TRUB2	99	77.397	ENSSSCG00000005645	TRUB2	88	76.538	Sus_scrofa
ENSMODG00000005940	TRUB2	88	66.023	ENSTGUG00000003704	TRUB2	99	66.023	Taeniopygia_guttata
ENSMODG00000005940	TRUB2	94	52.330	ENSTRUG00000015499	trub2	85	52.330	Takifugu_rubripes
ENSMODG00000005940	TRUB2	94	52.837	ENSTNIG00000014721	trub2	96	52.837	Tetraodon_nigroviridis
ENSMODG00000005940	TRUB2	64	74.211	ENSTBEG00000000586	TRUB2	84	74.211	Tupaia_belangeri
ENSMODG00000005940	TRUB2	99	72.603	ENSTTRG00000016486	TRUB2	88	72.603	Tursiops_truncatus
ENSMODG00000005940	TRUB2	99	73.973	ENSUAMG00000020276	TRUB2	86	73.973	Ursus_americanus
ENSMODG00000005940	TRUB2	99	73.973	ENSUMAG00000022051	TRUB2	86	73.973	Ursus_maritimus
ENSMODG00000005940	TRUB2	99	56.271	ENSVPAG00000005793	TRUB2	93	56.271	Vicugna_pacos
ENSMODG00000005940	TRUB2	99	73.630	ENSVVUG00000013451	TRUB2	83	73.630	Vulpes_vulpes
ENSMODG00000005940	TRUB2	96	64.085	ENSXETG00000003973	trub2	87	64.085	Xenopus_tropicalis
ENSMODG00000005940	TRUB2	95	53.357	ENSXCOG00000008759	trub2	84	53.357	Xiphophorus_couchianus
ENSMODG00000005940	TRUB2	95	53.710	ENSXMAG00000015478	trub2	84	53.710	Xiphophorus_maculatus