EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000005978 (Gene tree)
Gene ID: 100017256
Gene Symbol: GTPBP4
Alias: CRFG|FLJ10686|FLJ10690|NGB|NOG1
Full Name: GTP binding protein 4
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 32801 bases
Position: chr8:228870109-228902909
Accession: 100017256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000033364	NOG1	PF06858.14	5.1e-28	1	1
ENSMODP00000033364	MMR_HSR1	PF01926.23	1.3e-19	1	1
ENSMODP00000033364	NOGCT	PF08155.11	1.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000034941	GTPBP4-201	3397	-	ENSMODP00000033364	634 (aa)	XP_001365359	F6TMC7

Gene Model

Click here to download ENSMODG00000005978's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000005978's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000005978	GTPBP4	100	90.221	ENSG00000107937	GTPBP4	100	97.143	Homo_sapiens
ENSMODG00000005978	GTPBP4	100	84.700	ENSAPOG00000020433	gtpbp4	100	80.945	Acanthochromis_polyacanthus
ENSMODG00000005978	GTPBP4	100	89.748	ENSAMEG00000001845	GTPBP4	100	89.748	Ailuropoda_melanoleuca
ENSMODG00000005978	GTPBP4	100	80.915	ENSACIG00000018629	gtpbp4	100	80.915	Amphilophus_citrinellus
ENSMODG00000005978	GTPBP4	100	85.016	ENSAOCG00000000427	gtpbp4	93	85.016	Amphiprion_ocellaris
ENSMODG00000005978	GTPBP4	100	85.174	ENSAPEG00000002544	gtpbp4	100	85.174	Amphiprion_percula
ENSMODG00000005978	GTPBP4	100	85.647	ENSATEG00000012635	gtpbp4	95	85.647	Anabas_testudineus
ENSMODG00000005978	GTPBP4	52	82.175	ENSAPLG00000013790	-	100	82.175	Anas_platyrhynchos
ENSMODG00000005978	GTPBP4	100	87.382	ENSACAG00000002943	GTPBP4	100	87.382	Anolis_carolinensis
ENSMODG00000005978	GTPBP4	87	83.237	ENSANAG00000029209	-	100	85.329	Aotus_nancymaae
ENSMODG00000005978	GTPBP4	98	78.571	ENSANAG00000022188	-	99	78.571	Aotus_nancymaae
ENSMODG00000005978	GTPBP4	71	89.286	ENSACLG00000026330	gtpbp4	92	94.667	Astatotilapia_calliptera
ENSMODG00000005978	GTPBP4	100	83.438	ENSAMXG00000019771	gtpbp4	100	83.438	Astyanax_mexicanus
ENSMODG00000005978	GTPBP4	100	90.063	ENSBTAG00000014917	GTPBP4	100	90.063	Bos_taurus
ENSMODG00000005978	GTPBP4	99	52.838	WBGene00020297	nog-1	99	52.098	Caenorhabditis_elegans
ENSMODG00000005978	GTPBP4	100	90.409	ENSCJAG00000008494	-	100	90.252	Callithrix_jacchus
ENSMODG00000005978	GTPBP4	100	89.151	ENSCJAG00000022962	-	100	89.151	Callithrix_jacchus
ENSMODG00000005978	GTPBP4	93	90.630	ENSCAFG00000005536	GTPBP4	100	90.630	Canis_familiaris
ENSMODG00000005978	GTPBP4	100	90.694	ENSCAFG00020004307	GTPBP4	100	90.694	Canis_lupus_dingo
ENSMODG00000005978	GTPBP4	100	90.063	ENSCHIG00000018346	GTPBP4	100	90.063	Capra_hircus
ENSMODG00000005978	GTPBP4	100	90.063	ENSTSYG00000004977	GTPBP4	100	90.063	Carlito_syrichta
ENSMODG00000005978	GTPBP4	98	81.760	ENSCAPG00000002134	GTPBP4	97	81.760	Cavia_aperea
ENSMODG00000005978	GTPBP4	100	91.167	ENSCPOG00000013736	GTPBP4	100	91.167	Cavia_porcellus
ENSMODG00000005978	GTPBP4	100	68.139	ENSCCAG00000030115	-	100	67.981	Cebus_capucinus
ENSMODG00000005978	GTPBP4	99	90.205	ENSCCAG00000021627	-	92	90.047	Cebus_capucinus
ENSMODG00000005978	GTPBP4	100	90.536	ENSCATG00000004303	GTPBP4	100	90.536	Cercocebus_atys
ENSMODG00000005978	GTPBP4	100	91.167	ENSCLAG00000011323	GTPBP4	100	91.167	Chinchilla_lanigera
ENSMODG00000005978	GTPBP4	100	90.694	ENSCSAG00000014097	GTPBP4	100	90.694	Chlorocebus_sabaeus
ENSMODG00000005978	GTPBP4	96	93.261	ENSCHOG00000012602	GTPBP4	88	93.261	Choloepus_hoffmanni
ENSMODG00000005978	GTPBP4	100	89.590	ENSCPBG00000008398	GTPBP4	100	89.590	Chrysemys_picta_bellii
ENSMODG00000005978	GTPBP4	100	62.481	ENSCING00000001957	-	100	63.101	Ciona_intestinalis
ENSMODG00000005978	GTPBP4	100	62.117	ENSCSAVG00000009793	-	99	77.994	Ciona_savignyi
ENSMODG00000005978	GTPBP4	100	86.185	ENSCANG00000014168	GTPBP4	100	86.185	Colobus_angolensis_palliatus
ENSMODG00000005978	GTPBP4	100	91.325	ENSCGRG00001013765	Gtpbp4	100	91.325	Cricetulus_griseus_chok1gshd
ENSMODG00000005978	GTPBP4	100	91.325	ENSCGRG00000012171	Gtpbp4	100	91.325	Cricetulus_griseus_crigri
ENSMODG00000005978	GTPBP4	100	80.126	ENSCSEG00000007352	gtpbp4	100	79.968	Cynoglossus_semilaevis
ENSMODG00000005978	GTPBP4	100	84.227	ENSCVAG00000008993	gtpbp4	100	84.227	Cyprinodon_variegatus
ENSMODG00000005978	GTPBP4	100	84.543	ENSDARG00000018961	gtpbp4	100	84.543	Danio_rerio
ENSMODG00000005978	GTPBP4	67	88.235	ENSDNOG00000006746	GTPBP4	100	88.235	Dasypus_novemcinctus
ENSMODG00000005978	GTPBP4	82	94.286	ENSDORG00000010884	Gtpbp4	96	94.286	Dipodomys_ordii
ENSMODG00000005978	GTPBP4	100	58.869	FBgn0028473	Non1	100	58.896	Drosophila_melanogaster
ENSMODG00000005978	GTPBP4	74	88.776	ENSETEG00000016840	-	71	88.776	Echinops_telfairi
ENSMODG00000005978	GTPBP4	98	64.377	ENSEBUG00000010311	gtpbp4	99	62.780	Eptatretus_burgeri
ENSMODG00000005978	GTPBP4	100	90.852	ENSEASG00005019082	GTPBP4	100	90.852	Equus_asinus_asinus
ENSMODG00000005978	GTPBP4	100	90.852	ENSECAG00000001700	GTPBP4	100	90.852	Equus_caballus
ENSMODG00000005978	GTPBP4	100	91.375	ENSEEUG00000009889	GTPBP4	91	91.375	Erinaceus_europaeus
ENSMODG00000005978	GTPBP4	100	83.019	ENSELUG00000008578	gtpbp4	96	83.475	Esox_lucius
ENSMODG00000005978	GTPBP4	100	91.009	ENSFCAG00000026213	GTPBP4	100	91.009	Felis_catus
ENSMODG00000005978	GTPBP4	99	87.975	ENSFALG00000006971	GTPBP4	87	89.274	Ficedula_albicollis
ENSMODG00000005978	GTPBP4	100	91.325	ENSFDAG00000000998	GTPBP4	100	91.325	Fukomys_damarensis
ENSMODG00000005978	GTPBP4	100	84.858	ENSFHEG00000012922	gtpbp4	100	84.858	Fundulus_heteroclitus
ENSMODG00000005978	GTPBP4	100	82.650	ENSGMOG00000016090	gtpbp4	100	82.650	Gadus_morhua
ENSMODG00000005978	GTPBP4	100	88.959	ENSGALG00000006703	GTPBP4	100	88.959	Gallus_gallus
ENSMODG00000005978	GTPBP4	100	85.174	ENSGAFG00000002075	gtpbp4	100	85.174	Gambusia_affinis
ENSMODG00000005978	GTPBP4	100	84.069	ENSGACG00000017481	gtpbp4	100	84.069	Gasterosteus_aculeatus
ENSMODG00000005978	GTPBP4	93	89.097	ENSGAGG00000018689	GTPBP4	100	89.097	Gopherus_agassizii
ENSMODG00000005978	GTPBP4	100	90.379	ENSGGOG00000013372	GTPBP4	100	90.379	Gorilla_gorilla
ENSMODG00000005978	GTPBP4	100	85.489	ENSHBUG00000000192	gtpbp4	100	85.489	Haplochromis_burtoni
ENSMODG00000005978	GTPBP4	100	90.694	ENSHGLG00000013071	GTPBP4	100	90.694	Heterocephalus_glaber_female
ENSMODG00000005978	GTPBP4	100	82.992	ENSHGLG00100002964	-	100	82.992	Heterocephalus_glaber_male
ENSMODG00000005978	GTPBP4	100	90.694	ENSHGLG00100017850	GTPBP4	100	90.694	Heterocephalus_glaber_male
ENSMODG00000005978	GTPBP4	100	84.567	ENSHCOG00000011543	gtpbp4	100	84.567	Hippocampus_comes
ENSMODG00000005978	GTPBP4	100	84.227	ENSIPUG00000014417	GTPBP4	100	84.227	Ictalurus_punctatus
ENSMODG00000005978	GTPBP4	100	82.334	ENSSTOG00000023023	-	100	82.334	Ictidomys_tridecemlineatus
ENSMODG00000005978	GTPBP4	100	91.325	ENSSTOG00000010042	-	100	91.325	Ictidomys_tridecemlineatus
ENSMODG00000005978	GTPBP4	100	90.379	ENSJJAG00000010021	Gtpbp4	100	90.379	Jaculus_jaculus
ENSMODG00000005978	GTPBP4	100	82.650	ENSKMAG00000021705	gtpbp4	100	82.650	Kryptolebias_marmoratus
ENSMODG00000005978	GTPBP4	100	79.685	ENSLBEG00000021419	gtpbp4	100	82.993	Labrus_bergylta
ENSMODG00000005978	GTPBP4	100	85.647	ENSLACG00000001449	GTPBP4	100	85.647	Latimeria_chalumnae
ENSMODG00000005978	GTPBP4	100	82.000	ENSLOCG00000012279	gtpbp4	100	82.000	Lepisosteus_oculatus
ENSMODG00000005978	GTPBP4	100	90.536	ENSLAFG00000018578	GTPBP4	100	90.536	Loxodonta_africana
ENSMODG00000005978	GTPBP4	100	90.379	ENSMFAG00000046251	GTPBP4	100	90.379	Macaca_fascicularis
ENSMODG00000005978	GTPBP4	100	87.382	ENSMMUG00000010813	GTPBP4	100	87.382	Macaca_mulatta
ENSMODG00000005978	GTPBP4	100	90.536	ENSMNEG00000044366	GTPBP4	100	90.536	Macaca_nemestrina
ENSMODG00000005978	GTPBP4	100	90.379	ENSMLEG00000039605	GTPBP4	100	90.379	Mandrillus_leucophaeus
ENSMODG00000005978	GTPBP4	100	85.174	ENSMAMG00000013763	gtpbp4	92	85.174	Mastacembelus_armatus
ENSMODG00000005978	GTPBP4	100	85.647	ENSMZEG00005006621	gtpbp4	100	85.647	Maylandia_zebra
ENSMODG00000005978	GTPBP4	100	91.009	ENSMAUG00000000571	Gtpbp4	100	91.009	Mesocricetus_auratus
ENSMODG00000005978	GTPBP4	100	91.009	ENSMICG00000013332	GTPBP4	100	91.009	Microcebus_murinus
ENSMODG00000005978	GTPBP4	100	90.536	ENSMOCG00000002209	Gtpbp4	100	90.536	Microtus_ochrogaster
ENSMODG00000005978	GTPBP4	100	81.546	ENSMMOG00000011257	gtpbp4	100	81.546	Mola_mola
ENSMODG00000005978	GTPBP4	100	83.754	ENSMALG00000012488	gtpbp4	100	83.754	Monopterus_albus
ENSMODG00000005978	GTPBP4	99	89.557	MGP_CAROLIEiJ_G0018215	Gtpbp4	100	90.217	Mus_caroli
ENSMODG00000005978	GTPBP4	100	90.694	ENSMUSG00000021149	Gtpbp4	100	90.694	Mus_musculus
ENSMODG00000005978	GTPBP4	100	90.536	MGP_PahariEiJ_G0019265	Gtpbp4	100	90.536	Mus_pahari
ENSMODG00000005978	GTPBP4	99	90.506	MGP_SPRETEiJ_G0019073	Gtpbp4	100	90.506	Mus_spretus
ENSMODG00000005978	GTPBP4	93	89.779	ENSMPUG00000016221	GTPBP4	100	89.779	Mustela_putorius_furo
ENSMODG00000005978	GTPBP4	100	90.221	ENSMLUG00000028192	GTPBP4	100	90.221	Myotis_lucifugus
ENSMODG00000005978	GTPBP4	100	90.221	ENSNGAG00000015364	Gtpbp4	100	90.221	Nannospalax_galili
ENSMODG00000005978	GTPBP4	87	83.333	ENSNBRG00000019965	gtpbp4	86	83.333	Neolamprologus_brichardi
ENSMODG00000005978	GTPBP4	100	90.536	ENSNLEG00000013495	GTPBP4	100	90.536	Nomascus_leucogenys
ENSMODG00000005978	GTPBP4	64	96.970	ENSMEUG00000016215	-	67	96.875	Notamacropus_eugenii
ENSMODG00000005978	GTPBP4	89	93.801	ENSOPRG00000008671	GTPBP4	86	93.801	Ochotona_princeps
ENSMODG00000005978	GTPBP4	100	91.325	ENSODEG00000000962	-	100	91.325	Octodon_degus
ENSMODG00000005978	GTPBP4	100	89.117	ENSODEG00000019152	-	100	89.117	Octodon_degus
ENSMODG00000005978	GTPBP4	100	85.647	ENSONIG00000017707	gtpbp4	100	85.647	Oreochromis_niloticus
ENSMODG00000005978	GTPBP4	99	90.032	ENSOANG00000006095	-	99	90.032	Ornithorhynchus_anatinus
ENSMODG00000005978	GTPBP4	100	88.959	ENSOCUG00000016120	-	100	88.959	Oryctolagus_cuniculus
ENSMODG00000005978	GTPBP4	59	83.377	ENSOCUG00000014716	-	100	83.377	Oryctolagus_cuniculus
ENSMODG00000005978	GTPBP4	100	83.912	ENSORLG00000006151	gtpbp4	100	83.912	Oryzias_latipes
ENSMODG00000005978	GTPBP4	100	83.912	ENSORLG00020020899	gtpbp4	100	83.912	Oryzias_latipes_hni
ENSMODG00000005978	GTPBP4	100	83.754	ENSORLG00015020562	gtpbp4	100	83.754	Oryzias_latipes_hsok
ENSMODG00000005978	GTPBP4	100	83.596	ENSOMEG00000019684	gtpbp4	100	83.596	Oryzias_melastigma
ENSMODG00000005978	GTPBP4	100	91.009	ENSOGAG00000011941	GTPBP4	100	91.009	Otolemur_garnettii
ENSMODG00000005978	GTPBP4	100	89.639	ENSOARG00000015047	GTPBP4	100	89.482	Ovis_aries
ENSMODG00000005978	GTPBP4	100	90.379	ENSPPAG00000042066	GTPBP4	100	90.379	Pan_paniscus
ENSMODG00000005978	GTPBP4	100	91.167	ENSPPRG00000009895	GTPBP4	100	91.167	Panthera_pardus
ENSMODG00000005978	GTPBP4	100	91.325	ENSPTIG00000008569	GTPBP4	100	91.325	Panthera_tigris_altaica
ENSMODG00000005978	GTPBP4	71	92.274	ENSPTRG00000002236	GTPBP4	86	93.065	Pan_troglodytes
ENSMODG00000005978	GTPBP4	100	90.379	ENSPANG00000023543	GTPBP4	100	90.379	Papio_anubis
ENSMODG00000005978	GTPBP4	100	83.754	ENSPKIG00000012301	gtpbp4	100	83.754	Paramormyrops_kingsleyae
ENSMODG00000005978	GTPBP4	56	94.398	ENSPSIG00000005442	GTPBP4	93	94.398	Pelodiscus_sinensis
ENSMODG00000005978	GTPBP4	100	79.968	ENSPMGG00000001462	gtpbp4	100	79.968	Periophthalmus_magnuspinnatus
ENSMODG00000005978	GTPBP4	100	67.035	ENSPEMG00000012279	-	100	67.035	Peromyscus_maniculatus_bairdii
ENSMODG00000005978	GTPBP4	100	91.009	ENSPEMG00000015091	-	100	91.009	Peromyscus_maniculatus_bairdii
ENSMODG00000005978	GTPBP4	100	79.338	ENSPMAG00000000905	gtpbp4	100	79.338	Petromyzon_marinus
ENSMODG00000005978	GTPBP4	100	97.476	ENSPCIG00000026082	GTPBP4	100	97.476	Phascolarctos_cinereus
ENSMODG00000005978	GTPBP4	100	85.331	ENSPFOG00000000026	gtpbp4	100	85.331	Poecilia_formosa
ENSMODG00000005978	GTPBP4	92	85.641	ENSPLAG00000002898	gtpbp4	97	85.641	Poecilia_latipinna
ENSMODG00000005978	GTPBP4	100	85.489	ENSPMEG00000016422	gtpbp4	100	85.489	Poecilia_mexicana
ENSMODG00000005978	GTPBP4	100	80.599	ENSPREG00000019870	gtpbp4	100	80.599	Poecilia_reticulata
ENSMODG00000005978	GTPBP4	100	90.694	ENSPPYG00000002037	GTPBP4	100	90.694	Pongo_abelii
ENSMODG00000005978	GTPBP4	97	85.854	ENSPCOG00000014602	-	100	85.854	Propithecus_coquereli
ENSMODG00000005978	GTPBP4	100	85.962	ENSPCOG00000014382	-	100	85.962	Propithecus_coquereli
ENSMODG00000005978	GTPBP4	92	93.082	ENSPVAG00000005882	GTPBP4	86	93.082	Pteropus_vampyrus
ENSMODG00000005978	GTPBP4	100	75.710	ENSPNYG00000024251	gtpbp4	100	75.710	Pundamilia_nyererei
ENSMODG00000005978	GTPBP4	100	84.543	ENSPNAG00000019977	gtpbp4	100	84.543	Pygocentrus_nattereri
ENSMODG00000005978	GTPBP4	100	90.252	ENSRNOG00000016217	Gtpbp4	100	90.094	Rattus_norvegicus
ENSMODG00000005978	GTPBP4	100	90.221	ENSRBIG00000028875	GTPBP4	100	90.221	Rhinopithecus_bieti
ENSMODG00000005978	GTPBP4	100	90.221	ENSRROG00000030798	GTPBP4	100	90.221	Rhinopithecus_roxellana
ENSMODG00000005978	GTPBP4	99	46.357	YPL093W	-	99	46.357	Saccharomyces_cerevisiae
ENSMODG00000005978	GTPBP4	100	90.566	ENSSBOG00000028421	GTPBP4	100	90.094	Saimiri_boliviensis_boliviensis
ENSMODG00000005978	GTPBP4	99	97.293	ENSSHAG00000014713	GTPBP4	94	97.293	Sarcophilus_harrisii
ENSMODG00000005978	GTPBP4	100	83.123	ENSSFOG00015003167	gtpbp4	100	83.123	Scleropages_formosus
ENSMODG00000005978	GTPBP4	100	84.227	ENSSMAG00000005863	gtpbp4	100	84.227	Scophthalmus_maximus
ENSMODG00000005978	GTPBP4	100	85.174	ENSSDUG00000006534	gtpbp4	100	85.174	Seriola_dumerili
ENSMODG00000005978	GTPBP4	100	85.174	ENSSLDG00000020688	gtpbp4	100	85.174	Seriola_lalandi_dorsalis
ENSMODG00000005978	GTPBP4	61	98.020	ENSSARG00000003409	-	79	98.020	Sorex_araneus
ENSMODG00000005978	GTPBP4	100	88.801	ENSSPUG00000002153	GTPBP4	100	88.801	Sphenodon_punctatus
ENSMODG00000005978	GTPBP4	63	74.307	ENSSPAG00000014583	gtpbp4	100	74.307	Stegastes_partitus
ENSMODG00000005978	GTPBP4	100	88.486	ENSSSCG00000028602	GTPBP4	100	88.486	Sus_scrofa
ENSMODG00000005978	GTPBP4	99	87.739	ENSTGUG00000000820	GTPBP4	100	89.013	Taeniopygia_guttata
ENSMODG00000005978	GTPBP4	100	83.438	ENSTRUG00000003900	gtpbp4	100	83.438	Takifugu_rubripes
ENSMODG00000005978	GTPBP4	100	84.858	ENSTNIG00000007992	gtpbp4	100	84.858	Tetraodon_nigroviridis
ENSMODG00000005978	GTPBP4	100	76.369	ENSTBEG00000003613	GTPBP4	100	76.369	Tupaia_belangeri
ENSMODG00000005978	GTPBP4	100	85.000	ENSTTRG00000011163	GTPBP4	100	85.000	Tursiops_truncatus
ENSMODG00000005978	GTPBP4	100	89.905	ENSUAMG00000013191	GTPBP4	100	89.905	Ursus_americanus
ENSMODG00000005978	GTPBP4	93	89.779	ENSUMAG00000016138	GTPBP4	100	89.779	Ursus_maritimus
ENSMODG00000005978	GTPBP4	100	90.694	ENSVVUG00000008608	GTPBP4	98	90.694	Vulpes_vulpes
ENSMODG00000005978	GTPBP4	100	75.237	ENSXETG00000018097	gtpbp4	100	77.177	Xenopus_tropicalis
ENSMODG00000005978	GTPBP4	100	78.336	ENSXCOG00000019953	gtpbp4	98	78.336	Xiphophorus_couchianus
ENSMODG00000005978	GTPBP4	100	84.615	ENSXMAG00000006719	gtpbp4	100	84.615	Xiphophorus_maculatus