EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000006163 (Gene tree)
Gene ID: 100031372
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 99815 bases
Position: chr1:600378124-600477938
Accession: 100031372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000007639	XRN_N	PF03159.18	6.8e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000007793	XRN2-201	2848	-	ENSMODP00000007639	947 (aa)	XP_001373979	F7BS67

Gene Model

Click here to download ENSMODG00000006163's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03008	Ribosome biogenesis in eukaryotes	KEGG
mdo03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000006163's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000006163	XRN2	100	91.158	ENSG00000088930	XRN2	100	91.158	Homo_sapiens
ENSMODG00000006163	XRN2	97	71.979	ENSAPOG00000009818	xrn2	100	70.787	Acanthochromis_polyacanthus
ENSMODG00000006163	XRN2	100	90.947	ENSAMEG00000012581	XRN2	100	90.947	Ailuropoda_melanoleuca
ENSMODG00000006163	XRN2	90	70.387	ENSACIG00000015047	xrn2	95	74.952	Amphilophus_citrinellus
ENSMODG00000006163	XRN2	97	71.872	ENSAOCG00000023632	xrn2	100	71.195	Amphiprion_ocellaris
ENSMODG00000006163	XRN2	97	72.222	ENSAPEG00000014871	xrn2	100	71.020	Amphiprion_percula
ENSMODG00000006163	XRN2	96	72.126	ENSATEG00000001273	xrn2	97	71.550	Anabas_testudineus
ENSMODG00000006163	XRN2	97	84.341	ENSAPLG00000013869	XRN2	99	84.341	Anas_platyrhynchos
ENSMODG00000006163	XRN2	100	81.478	ENSACAG00000005565	XRN2	100	81.478	Anolis_carolinensis
ENSMODG00000006163	XRN2	100	90.842	ENSANAG00000020126	XRN2	100	90.842	Aotus_nancymaae
ENSMODG00000006163	XRN2	91	72.945	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSMODG00000006163	XRN2	100	71.648	ENSAMXG00000018301	xrn2	100	71.648	Astyanax_mexicanus
ENSMODG00000006163	XRN2	100	89.590	ENSBTAG00000011304	XRN2	100	89.590	Bos_taurus
ENSMODG00000006163	XRN2	87	55.504	WBGene00006964	xrn-2	89	55.074	Caenorhabditis_elegans
ENSMODG00000006163	XRN2	100	91.053	ENSCJAG00000005611	XRN2	100	91.053	Callithrix_jacchus
ENSMODG00000006163	XRN2	100	90.947	ENSCAFG00000005185	XRN2	100	90.947	Canis_familiaris
ENSMODG00000006163	XRN2	100	90.947	ENSCAFG00020027479	XRN2	100	90.947	Canis_lupus_dingo
ENSMODG00000006163	XRN2	100	89.485	ENSCHIG00000006921	XRN2	100	89.485	Capra_hircus
ENSMODG00000006163	XRN2	100	90.211	ENSTSYG00000008315	XRN2	100	90.211	Carlito_syrichta
ENSMODG00000006163	XRN2	97	76.509	ENSCAPG00000010773	XRN2	99	76.401	Cavia_aperea
ENSMODG00000006163	XRN2	100	90.632	ENSCPOG00000009407	XRN2	100	90.632	Cavia_porcellus
ENSMODG00000006163	XRN2	100	91.263	ENSCATG00000040350	XRN2	100	91.263	Cercocebus_atys
ENSMODG00000006163	XRN2	100	91.053	ENSCLAG00000013419	XRN2	100	91.053	Chinchilla_lanigera
ENSMODG00000006163	XRN2	100	91.263	ENSCSAG00000011094	XRN2	100	91.263	Chlorocebus_sabaeus
ENSMODG00000006163	XRN2	68	96.237	ENSCHOG00000013404	XRN2	70	96.237	Choloepus_hoffmanni
ENSMODG00000006163	XRN2	100	86.221	ENSCPBG00000023533	XRN2	100	86.430	Chrysemys_picta_bellii
ENSMODG00000006163	XRN2	86	59.521	ENSCING00000022336	-	100	59.880	Ciona_intestinalis
ENSMODG00000006163	XRN2	98	54.633	ENSCSAVG00000011217	-	100	61.217	Ciona_savignyi
ENSMODG00000006163	XRN2	100	91.263	ENSCANG00000040240	XRN2	100	91.263	Colobus_angolensis_palliatus
ENSMODG00000006163	XRN2	98	90.635	ENSCGRG00001010676	Xrn2	99	90.635	Cricetulus_griseus_chok1gshd
ENSMODG00000006163	XRN2	97	89.428	ENSCGRG00000006378	Xrn2	99	89.428	Cricetulus_griseus_crigri
ENSMODG00000006163	XRN2	54	73.725	ENSCSEG00000005628	xrn2	100	73.725	Cynoglossus_semilaevis
ENSMODG00000006163	XRN2	89	71.724	ENSCVAG00000018999	xrn2	98	77.524	Cyprinodon_variegatus
ENSMODG00000006163	XRN2	100	71.296	ENSDARG00000101900	xrn2	96	78.394	Danio_rerio
ENSMODG00000006163	XRN2	100	91.053	ENSDNOG00000001895	XRN2	100	91.053	Dasypus_novemcinctus
ENSMODG00000006163	XRN2	100	89.684	ENSDORG00000005434	Xrn2	100	89.684	Dipodomys_ordii
ENSMODG00000006163	XRN2	86	55.918	FBgn0031868	Rat1	91	54.662	Drosophila_melanogaster
ENSMODG00000006163	XRN2	100	79.158	ENSETEG00000001740	XRN2	100	79.158	Echinops_telfairi
ENSMODG00000006163	XRN2	85	71.152	ENSEBUG00000016136	xrn2	100	71.152	Eptatretus_burgeri
ENSMODG00000006163	XRN2	100	90.526	ENSEASG00005002484	XRN2	100	90.526	Equus_asinus_asinus
ENSMODG00000006163	XRN2	94	100.000	ENSECAG00000018988	XRN2	96	100.000	Equus_caballus
ENSMODG00000006163	XRN2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSMODG00000006163	XRN2	100	71.370	ENSELUG00000000552	xrn2	100	72.029	Esox_lucius
ENSMODG00000006163	XRN2	100	90.947	ENSFCAG00000007970	XRN2	100	90.947	Felis_catus
ENSMODG00000006163	XRN2	100	84.332	ENSFALG00000004508	XRN2	100	84.332	Ficedula_albicollis
ENSMODG00000006163	XRN2	100	91.263	ENSFDAG00000016311	XRN2	100	91.263	Fukomys_damarensis
ENSMODG00000006163	XRN2	54	70.342	ENSFHEG00000013039	xrn2	98	70.420	Fundulus_heteroclitus
ENSMODG00000006163	XRN2	86	74.241	ENSGMOG00000013436	xrn2	100	74.241	Gadus_morhua
ENSMODG00000006163	XRN2	100	83.824	ENSGALG00000008372	XRN2	100	83.824	Gallus_gallus
ENSMODG00000006163	XRN2	89	74.476	ENSGAFG00000014284	xrn2	98	74.476	Gambusia_affinis
ENSMODG00000006163	XRN2	88	75.390	ENSGACG00000011870	xrn2	100	75.390	Gasterosteus_aculeatus
ENSMODG00000006163	XRN2	100	86.013	ENSGAGG00000004884	XRN2	100	86.221	Gopherus_agassizii
ENSMODG00000006163	XRN2	100	91.263	ENSGGOG00000013738	XRN2	100	91.263	Gorilla_gorilla
ENSMODG00000006163	XRN2	54	74.856	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSMODG00000006163	XRN2	100	89.789	ENSHGLG00000014831	XRN2	100	89.684	Heterocephalus_glaber_female
ENSMODG00000006163	XRN2	100	89.789	ENSHGLG00100013130	XRN2	100	89.684	Heterocephalus_glaber_male
ENSMODG00000006163	XRN2	99	68.012	ENSHCOG00000011994	xrn2	99	68.927	Hippocampus_comes
ENSMODG00000006163	XRN2	100	69.827	ENSIPUG00000006639	xrn2	100	69.827	Ictalurus_punctatus
ENSMODG00000006163	XRN2	100	91.263	ENSSTOG00000000589	XRN2	100	91.263	Ictidomys_tridecemlineatus
ENSMODG00000006163	XRN2	100	90.737	ENSJJAG00000022128	Xrn2	100	90.737	Jaculus_jaculus
ENSMODG00000006163	XRN2	54	80.664	ENSLBEG00000010041	xrn2	100	80.664	Labrus_bergylta
ENSMODG00000006163	XRN2	94	77.716	ENSLACG00000008307	XRN2	99	80.613	Latimeria_chalumnae
ENSMODG00000006163	XRN2	99	74.528	ENSLOCG00000016874	xrn2	100	74.528	Lepisosteus_oculatus
ENSMODG00000006163	XRN2	100	90.421	ENSLAFG00000014624	XRN2	100	90.421	Loxodonta_africana
ENSMODG00000006163	XRN2	100	91.263	ENSMFAG00000038122	XRN2	100	91.263	Macaca_fascicularis
ENSMODG00000006163	XRN2	100	91.263	ENSMMUG00000011405	XRN2	100	91.263	Macaca_mulatta
ENSMODG00000006163	XRN2	100	91.158	ENSMNEG00000040626	XRN2	100	91.158	Macaca_nemestrina
ENSMODG00000006163	XRN2	100	91.158	ENSMLEG00000041897	XRN2	100	91.158	Mandrillus_leucophaeus
ENSMODG00000006163	XRN2	96	73.115	ENSMAMG00000008633	xrn2	96	72.629	Mastacembelus_armatus
ENSMODG00000006163	XRN2	91	74.886	ENSMZEG00005022362	xrn2	98	74.886	Maylandia_zebra
ENSMODG00000006163	XRN2	99	82.150	ENSMGAG00000003196	XRN2	99	82.150	Meleagris_gallopavo
ENSMODG00000006163	XRN2	100	90.211	ENSMAUG00000021842	Xrn2	100	90.211	Mesocricetus_auratus
ENSMODG00000006163	XRN2	100	90.316	ENSMICG00000008126	XRN2	100	90.316	Microcebus_murinus
ENSMODG00000006163	XRN2	100	89.474	ENSMOCG00000012588	Xrn2	100	89.474	Microtus_ochrogaster
ENSMODG00000006163	XRN2	89	74.083	ENSMMOG00000017576	xrn2	96	75.189	Mola_mola
ENSMODG00000006163	XRN2	91	72.553	ENSMALG00000011355	xrn2	100	72.370	Monopterus_albus
ENSMODG00000006163	XRN2	100	89.485	MGP_CAROLIEiJ_G0024400	Xrn2	100	89.485	Mus_caroli
ENSMODG00000006163	XRN2	100	89.695	ENSMUSG00000027433	Xrn2	100	89.695	Mus_musculus
ENSMODG00000006163	XRN2	100	89.485	MGP_PahariEiJ_G0025843	Xrn2	100	89.485	Mus_pahari
ENSMODG00000006163	XRN2	100	89.695	MGP_SPRETEiJ_G0025318	Xrn2	100	89.695	Mus_spretus
ENSMODG00000006163	XRN2	100	89.349	ENSMPUG00000001198	XRN2	93	89.349	Mustela_putorius_furo
ENSMODG00000006163	XRN2	100	91.053	ENSMLUG00000001536	XRN2	100	91.053	Myotis_lucifugus
ENSMODG00000006163	XRN2	100	90.947	ENSNGAG00000018138	Xrn2	100	90.947	Nannospalax_galili
ENSMODG00000006163	XRN2	91	75.200	ENSNBRG00000008062	xrn2	98	75.200	Neolamprologus_brichardi
ENSMODG00000006163	XRN2	100	91.158	ENSNLEG00000009991	XRN2	100	91.158	Nomascus_leucogenys
ENSMODG00000006163	XRN2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSMODG00000006163	XRN2	75	78.010	ENSOPRG00000001397	-	77	78.010	Ochotona_princeps
ENSMODG00000006163	XRN2	100	91.158	ENSODEG00000010745	-	100	91.158	Octodon_degus
ENSMODG00000006163	XRN2	98	82.632	ENSODEG00000000860	-	99	82.956	Octodon_degus
ENSMODG00000006163	XRN2	100	72.004	ENSONIG00000018720	xrn2	100	72.435	Oreochromis_niloticus
ENSMODG00000006163	XRN2	100	91.895	ENSOANG00000015673	XRN2	100	91.895	Ornithorhynchus_anatinus
ENSMODG00000006163	XRN2	100	91.053	ENSOCUG00000013468	XRN2	100	91.053	Oryctolagus_cuniculus
ENSMODG00000006163	XRN2	98	71.160	ENSORLG00000017213	xrn2	97	75.376	Oryzias_latipes
ENSMODG00000006163	XRN2	98	71.160	ENSORLG00020001824	xrn2	100	70.787	Oryzias_latipes_hni
ENSMODG00000006163	XRN2	98	70.951	ENSORLG00015019747	xrn2	100	70.582	Oryzias_latipes_hsok
ENSMODG00000006163	XRN2	100	69.654	ENSOMEG00000019820	xrn2	100	70.183	Oryzias_melastigma
ENSMODG00000006163	XRN2	100	90.221	ENSOGAG00000001068	XRN2	100	90.221	Otolemur_garnettii
ENSMODG00000006163	XRN2	97	89.201	ENSOARG00000004443	XRN2	100	89.201	Ovis_aries
ENSMODG00000006163	XRN2	100	91.263	ENSPPAG00000033549	XRN2	100	91.263	Pan_paniscus
ENSMODG00000006163	XRN2	100	90.947	ENSPPRG00000008732	XRN2	100	90.947	Panthera_pardus
ENSMODG00000006163	XRN2	97	90.703	ENSPTIG00000015683	XRN2	97	90.703	Panthera_tigris_altaica
ENSMODG00000006163	XRN2	100	91.263	ENSPTRG00000013308	XRN2	100	91.263	Pan_troglodytes
ENSMODG00000006163	XRN2	100	91.263	ENSPANG00000018088	XRN2	100	91.263	Papio_anubis
ENSMODG00000006163	XRN2	100	71.240	ENSPKIG00000016889	xrn2	100	72.177	Paramormyrops_kingsleyae
ENSMODG00000006163	XRN2	81	88.021	ENSPSIG00000014666	XRN2	100	88.021	Pelodiscus_sinensis
ENSMODG00000006163	XRN2	100	89.158	ENSPEMG00000000111	Xrn2	100	89.158	Peromyscus_maniculatus_bairdii
ENSMODG00000006163	XRN2	100	70.374	ENSPFOG00000004182	xrn2	99	70.747	Poecilia_formosa
ENSMODG00000006163	XRN2	89	74.942	ENSPLAG00000007351	xrn2	96	74.942	Poecilia_latipinna
ENSMODG00000006163	XRN2	94	68.743	ENSPMEG00000011798	xrn2	99	69.138	Poecilia_mexicana
ENSMODG00000006163	XRN2	90	74.309	ENSPREG00000012452	xrn2	99	73.146	Poecilia_reticulata
ENSMODG00000006163	XRN2	100	90.737	ENSPPYG00000010755	XRN2	100	90.737	Pongo_abelii
ENSMODG00000006163	XRN2	100	85.504	ENSPCAG00000011191	XRN2	100	85.504	Procavia_capensis
ENSMODG00000006163	XRN2	100	83.158	ENSPCOG00000016468	XRN2	100	83.158	Propithecus_coquereli
ENSMODG00000006163	XRN2	93	84.195	ENSPVAG00000004596	XRN2	93	84.195	Pteropus_vampyrus
ENSMODG00000006163	XRN2	91	72.945	ENSPNYG00000001765	xrn2	98	72.945	Pundamilia_nyererei
ENSMODG00000006163	XRN2	100	71.502	ENSPNAG00000010956	xrn2	99	71.502	Pygocentrus_nattereri
ENSMODG00000006163	XRN2	100	89.905	ENSRNOG00000011785	Xrn2	100	89.905	Rattus_norvegicus
ENSMODG00000006163	XRN2	86	92.665	ENSRBIG00000036193	XRN2	100	92.665	Rhinopithecus_bieti
ENSMODG00000006163	XRN2	100	91.263	ENSRROG00000044400	XRN2	90	91.263	Rhinopithecus_roxellana
ENSMODG00000006163	XRN2	64	54.444	YOR048C	RAT1	57	54.444	Saccharomyces_cerevisiae
ENSMODG00000006163	XRN2	100	91.053	ENSSBOG00000021014	XRN2	100	91.053	Saimiri_boliviensis_boliviensis
ENSMODG00000006163	XRN2	100	72.878	ENSSFOG00015001091	xrn2	100	72.878	Scleropages_formosus
ENSMODG00000006163	XRN2	89	75.496	ENSSMAG00000007834	xrn2	100	69.534	Scophthalmus_maximus
ENSMODG00000006163	XRN2	96	70.250	ENSSDUG00000012802	xrn2	99	72.831	Seriola_dumerili
ENSMODG00000006163	XRN2	93	74.576	ENSSLDG00000021273	xrn2	100	74.576	Seriola_lalandi_dorsalis
ENSMODG00000006163	XRN2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSMODG00000006163	XRN2	98	81.223	ENSSPUG00000005485	XRN2	96	81.438	Sphenodon_punctatus
ENSMODG00000006163	XRN2	100	70.697	ENSSPAG00000016027	xrn2	99	70.697	Stegastes_partitus
ENSMODG00000006163	XRN2	100	89.579	ENSSSCG00000007109	XRN2	100	89.579	Sus_scrofa
ENSMODG00000006163	XRN2	100	82.932	ENSTGUG00000007535	XRN2	100	82.932	Taeniopygia_guttata
ENSMODG00000006163	XRN2	100	68.352	ENSTRUG00000015489	xrn2	100	69.028	Takifugu_rubripes
ENSMODG00000006163	XRN2	100	71.028	ENSTNIG00000010712	xrn2	100	71.028	Tetraodon_nigroviridis
ENSMODG00000006163	XRN2	100	90.105	ENSTBEG00000004119	XRN2	100	90.105	Tupaia_belangeri
ENSMODG00000006163	XRN2	93	92.613	ENSTTRG00000009087	XRN2	93	92.613	Tursiops_truncatus
ENSMODG00000006163	XRN2	100	90.947	ENSUAMG00000024634	XRN2	100	90.947	Ursus_americanus
ENSMODG00000006163	XRN2	97	90.486	ENSUMAG00000004012	XRN2	95	90.486	Ursus_maritimus
ENSMODG00000006163	XRN2	89	83.550	ENSVPAG00000010694	XRN2	91	83.550	Vicugna_pacos
ENSMODG00000006163	XRN2	100	90.947	ENSVVUG00000012178	XRN2	100	90.947	Vulpes_vulpes
ENSMODG00000006163	XRN2	100	75.261	ENSXETG00000023501	xrn2	100	76.096	Xenopus_tropicalis
ENSMODG00000006163	XRN2	100	69.247	ENSXMAG00000000242	xrn2	92	80.292	Xiphophorus_maculatus