EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000006399 (Gene tree)
Gene ID: 100025366
Gene Symbol: -
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 10881 bases
Position: chr6:246479892-246490772
Accession: 100025366
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000033621	MBD	PF01429.19	1.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000035201	-	3510	-	ENSMODP00000033621	486 (aa)	XP_001376329	F6WF74

Gene Model

Click here to download ENSMODG00000006399's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000006399's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000006399	-	99	59.880	ENSG00000129071	MBD4	77	84.804	Homo_sapiens
ENSMODG00000006399	-	99	60.721	ENSAMEG00000004562	MBD4	86	60.721	Ailuropoda_melanoleuca
ENSMODG00000006399	-	63	60.976	ENSAOCG00000001157	mbd4	64	60.976	Amphiprion_ocellaris
ENSMODG00000006399	-	60	59.649	ENSAMXG00000017271	mbd4	70	59.649	Astyanax_mexicanus
ENSMODG00000006399	-	99	58.333	ENSBTAG00000021645	MBD4	86	58.333	Bos_taurus
ENSMODG00000006399	-	100	58.367	ENSCJAG00000017293	MBD4	86	58.532	Callithrix_jacchus
ENSMODG00000006399	-	99	60.400	ENSCAFG00000004867	MBD4	86	60.400	Canis_familiaris
ENSMODG00000006399	-	99	60.400	ENSCAFG00020007082	MBD4	86	60.400	Canis_lupus_dingo
ENSMODG00000006399	-	99	58.130	ENSCHIG00000009760	MBD4	86	58.130	Capra_hircus
ENSMODG00000006399	-	99	59.438	ENSCCAG00000029796	MBD4	86	59.839	Cebus_capucinus
ENSMODG00000006399	-	99	58.765	ENSCATG00000035211	MBD4	86	59.163	Cercocebus_atys
ENSMODG00000006399	-	99	57.600	ENSCLAG00000008974	MBD4	88	57.600	Chinchilla_lanigera
ENSMODG00000006399	-	99	58.964	ENSCSAG00000009037	MBD4	86	59.363	Chlorocebus_sabaeus
ENSMODG00000006399	-	99	52.632	ENSCPBG00000014704	MBD4	88	52.632	Chrysemys_picta_bellii
ENSMODG00000006399	-	99	58.483	ENSCANG00000007120	MBD4	86	58.882	Colobus_angolensis_palliatus
ENSMODG00000006399	-	98	56.400	ENSCGRG00001003507	Mbd4	86	56.400	Cricetulus_griseus_chok1gshd
ENSMODG00000006399	-	98	56.400	ENSCGRG00000010974	Mbd4	86	56.400	Cricetulus_griseus_crigri
ENSMODG00000006399	-	99	59.319	ENSDNOG00000049619	MBD4	87	59.319	Dasypus_novemcinctus
ENSMODG00000006399	-	86	48.712	ENSDORG00000000902	-	88	48.712	Dipodomys_ordii
ENSMODG00000006399	-	51	63.953	ENSEBUG00000010816	mbd4	57	63.953	Eptatretus_burgeri
ENSMODG00000006399	-	99	59.681	ENSEASG00005014800	MBD4	87	59.681	Equus_asinus_asinus
ENSMODG00000006399	-	99	58.800	ENSECAG00000022106	MBD4	87	58.800	Equus_caballus
ENSMODG00000006399	-	95	54.071	ENSEEUG00000011459	MBD4	88	54.697	Erinaceus_europaeus
ENSMODG00000006399	-	99	60.922	ENSFCAG00000000083	MBD4	86	60.922	Felis_catus
ENSMODG00000006399	-	94	45.094	ENSFALG00000013663	MBD4	99	44.848	Ficedula_albicollis
ENSMODG00000006399	-	50	79.882	ENSGAFG00000016011	mbd4	98	52.055	Gambusia_affinis
ENSMODG00000006399	-	99	52.446	ENSGAGG00000018644	MBD4	88	52.446	Gopherus_agassizii
ENSMODG00000006399	-	99	59.082	ENSGGOG00000010698	MBD4	86	59.681	Gorilla_gorilla
ENSMODG00000006399	-	99	56.713	ENSHGLG00000009034	MBD4	88	56.713	Heterocephalus_glaber_female
ENSMODG00000006399	-	99	56.914	ENSHGLG00100000135	MBD4	88	56.914	Heterocephalus_glaber_male
ENSMODG00000006399	-	99	58.635	ENSSTOG00000020663	MBD4	87	58.635	Ictidomys_tridecemlineatus
ENSMODG00000006399	-	50	81.065	ENSKMAG00000015015	mbd4	97	45.325	Kryptolebias_marmoratus
ENSMODG00000006399	-	54	74.112	ENSLOCG00000013054	MBD4	53	74.112	Lepisosteus_oculatus
ENSMODG00000006399	-	99	58.317	ENSLAFG00000010609	MBD4	85	58.317	Loxodonta_africana
ENSMODG00000006399	-	99	58.964	ENSMFAG00000002266	MBD4	86	58.929	Macaca_fascicularis
ENSMODG00000006399	-	99	58.929	ENSMMUG00000012723	MBD4	86	58.893	Macaca_mulatta
ENSMODG00000006399	-	95	56.904	ENSMNEG00000029752	MBD4	85	57.322	Macaca_nemestrina
ENSMODG00000006399	-	99	58.765	ENSMLEG00000024859	MBD4	86	59.163	Mandrillus_leucophaeus
ENSMODG00000006399	-	100	59.681	ENSMICG00000008022	MBD4	86	59.681	Microcebus_murinus
ENSMODG00000006399	-	62	35.220	ENSMOCG00000002466	-	78	35.220	Microtus_ochrogaster
ENSMODG00000006399	-	99	44.488	ENSMALG00000021517	mbd4	87	44.488	Monopterus_albus
ENSMODG00000006399	-	99	56.634	MGP_CAROLIEiJ_G0028760	Mbd4	87	56.634	Mus_caroli
ENSMODG00000006399	-	99	56.832	ENSMUSG00000030322	Mbd4	88	56.832	Mus_musculus
ENSMODG00000006399	-	99	56.360	MGP_PahariEiJ_G0022511	-	87	56.360	Mus_pahari
ENSMODG00000006399	-	99	56.548	MGP_SPRETEiJ_G0029788	Mbd4	88	56.548	Mus_spretus
ENSMODG00000006399	-	99	59.719	ENSMPUG00000017195	MBD4	86	59.719	Mustela_putorius_furo
ENSMODG00000006399	-	99	61.723	ENSMLUG00000014766	MBD4	91	61.723	Myotis_lucifugus
ENSMODG00000006399	-	99	59.200	ENSNLEG00000005337	MBD4	86	59.800	Nomascus_leucogenys
ENSMODG00000006399	-	59	100.000	ENSMEUG00000015599	-	69	100.000	Notamacropus_eugenii
ENSMODG00000006399	-	99	55.734	ENSOPRG00000000473	MBD4	86	55.734	Ochotona_princeps
ENSMODG00000006399	-	99	42.887	ENSONIG00000017212	mbd4	100	42.887	Oreochromis_niloticus
ENSMODG00000006399	-	77	43.147	ENSOANG00000004589	-	89	43.147	Ornithorhynchus_anatinus
ENSMODG00000006399	-	99	54.274	ENSOCUG00000013006	MBD4	86	54.274	Oryctolagus_cuniculus
ENSMODG00000006399	-	99	44.513	ENSOMEG00000008819	mbd4	91	44.513	Oryzias_melastigma
ENSMODG00000006399	-	99	58.350	ENSOGAG00000010236	MBD4	86	58.350	Otolemur_garnettii
ENSMODG00000006399	-	99	58.740	ENSOARG00000014699	MBD4	86	58.740	Ovis_aries
ENSMODG00000006399	-	99	59.082	ENSPPAG00000036528	MBD4	86	59.481	Pan_paniscus
ENSMODG00000006399	-	99	60.161	ENSPPRG00000016480	MBD4	86	60.161	Panthera_pardus
ENSMODG00000006399	-	99	59.281	ENSPTRG00000015377	MBD4	86	59.681	Pan_troglodytes
ENSMODG00000006399	-	99	59.761	ENSPANG00000015047	MBD4	86	60.159	Papio_anubis
ENSMODG00000006399	-	99	51.341	ENSPSIG00000007892	MBD4	88	51.341	Pelodiscus_sinensis
ENSMODG00000006399	-	92	52.128	ENSPEMG00000006226	Mbd4	86	52.128	Peromyscus_maniculatus_bairdii
ENSMODG00000006399	-	100	79.757	ENSPCIG00000002276	-	95	79.757	Phascolarctos_cinereus
ENSMODG00000006399	-	50	80.473	ENSPFOG00000014471	mbd4	54	80.473	Poecilia_formosa
ENSMODG00000006399	-	99	59.082	ENSPPYG00000013417	MBD4	86	59.481	Pongo_abelii
ENSMODG00000006399	-	95	56.994	ENSPCAG00000012915	MBD4	86	56.994	Procavia_capensis
ENSMODG00000006399	-	99	60.521	ENSPVAG00000005238	MBD4	86	60.521	Pteropus_vampyrus
ENSMODG00000006399	-	99	57.339	ENSRNOG00000010919	Mbd4	87	57.339	Rattus_norvegicus
ENSMODG00000006399	-	99	58.483	ENSRBIG00000027722	MBD4	86	58.882	Rhinopithecus_bieti
ENSMODG00000006399	-	99	58.283	ENSRROG00000029136	MBD4	86	58.683	Rhinopithecus_roxellana
ENSMODG00000006399	-	99	60.081	ENSSBOG00000016810	MBD4	86	60.081	Saimiri_boliviensis_boliviensis
ENSMODG00000006399	-	100	79.150	ENSSHAG00000012953	MBD4	87	79.555	Sarcophilus_harrisii
ENSMODG00000006399	-	88	38.940	ENSSLDG00000010295	MBD4	81	38.940	Seriola_lalandi_dorsalis
ENSMODG00000006399	-	93	49.156	ENSSARG00000004496	-	80	49.156	Sorex_araneus
ENSMODG00000006399	-	99	51.081	ENSSPUG00000017344	MBD4	91	51.081	Sphenodon_punctatus
ENSMODG00000006399	-	99	60.396	ENSSSCG00000033303	MBD4	87	60.396	Sus_scrofa
ENSMODG00000006399	-	60	57.384	ENSTNIG00000017927	mbd4	67	57.384	Tetraodon_nigroviridis
ENSMODG00000006399	-	84	62.385	ENSTBEG00000003041	-	73	62.385	Tupaia_belangeri
ENSMODG00000006399	-	99	60.159	ENSTTRG00000011265	MBD4	89	60.159	Tursiops_truncatus
ENSMODG00000006399	-	99	60.521	ENSUAMG00000000814	MBD4	99	60.521	Ursus_americanus
ENSMODG00000006399	-	99	60.120	ENSUMAG00000017542	MBD4	87	60.120	Ursus_maritimus
ENSMODG00000006399	-	60	61.635	ENSVPAG00000004040	-	53	61.635	Vicugna_pacos
ENSMODG00000006399	-	99	60.000	ENSVVUG00000014222	MBD4	86	60.000	Vulpes_vulpes
ENSMODG00000006399	-	50	79.882	ENSXMAG00000021129	mbd4	54	79.882	Xiphophorus_maculatus