EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000007003 (Gene tree)
Gene ID: 100015752
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 163939 bases
Position: chr5:183719611-183883549
Accession: 100015752
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000035735	RRM_1	PF00076.22	2.8e-39	1	3
ENSMODP00000035735	RRM_1	PF00076.22	2.8e-39	2	3
ENSMODP00000035735	RRM_1	PF00076.22	2.8e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000008855	RBM47-201	4808	-	ENSMODP00000035735	592 (aa)	XP_001365552	F7BKF6

Gene Model

Click here to download ENSMODG00000007003's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000007003's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000007003	RBM47	50	54.817	ENSMODG00000000609	-	79	45.982
ENSMODG00000007003	RBM47	50	49.502	ENSMODG00000018345	-	77	42.506
ENSMODG00000007003	RBM47	52	85.350	ENSMODG00000015426	-	98	85.350
ENSMODG00000007003	RBM47	52	55.238	ENSMODG00000016144	HNRNPR	68	45.969
ENSMODG00000007003	RBM47	100	86.318	ENSMODG00000020561	-	100	86.655
ENSMODG00000007003	RBM47	72	59.819	ENSMODG00000016478	A1CF	80	59.819
ENSMODG00000007003	RBM47	53	72.436	ENSMODG00000001302	RBM46	54	72.436

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000007003	RBM47	100	91.077	ENSG00000163694	RBM47	100	93.088	Homo_sapiens
ENSMODG00000007003	RBM47	100	78.631	ENSAPOG00000011062	rbm47	100	81.841	Acanthochromis_polyacanthus
ENSMODG00000007003	RBM47	100	90.604	ENSAMEG00000009672	RBM47	100	91.443	Ailuropoda_melanoleuca
ENSMODG00000007003	RBM47	100	77.462	ENSACIG00000011531	rbm47	100	77.629	Amphilophus_citrinellus
ENSMODG00000007003	RBM47	100	78.763	ENSAOCG00000022245	rbm47	100	81.841	Amphiprion_ocellaris
ENSMODG00000007003	RBM47	100	78.595	ENSAPEG00000018304	rbm47	100	81.841	Amphiprion_percula
ENSMODG00000007003	RBM47	100	78.232	ENSATEG00000018400	rbm47	100	77.578	Anabas_testudineus
ENSMODG00000007003	RBM47	100	88.403	ENSAPLG00000013974	RBM47	100	89.412	Anas_platyrhynchos
ENSMODG00000007003	RBM47	100	87.333	ENSACAG00000011833	RBM47	100	87.833	Anolis_carolinensis
ENSMODG00000007003	RBM47	100	91.077	ENSANAG00000029440	RBM47	100	92.533	Aotus_nancymaae
ENSMODG00000007003	RBM47	100	76.721	ENSACLG00000016902	rbm47	100	83.333	Astatotilapia_calliptera
ENSMODG00000007003	RBM47	100	75.574	ENSAMXG00000021794	rbm47	100	77.087	Astyanax_mexicanus
ENSMODG00000007003	RBM47	100	91.231	ENSBTAG00000002356	RBM47	100	91.737	Bos_taurus
ENSMODG00000007003	RBM47	100	90.756	ENSCJAG00000019385	RBM47	100	92.267	Callithrix_jacchus
ENSMODG00000007003	RBM47	96	91.053	ENSCAFG00000015898	RBM47	100	89.562	Canis_familiaris
ENSMODG00000007003	RBM47	83	92.261	ENSCAFG00020010558	RBM47	94	89.855	Canis_lupus_dingo
ENSMODG00000007003	RBM47	100	91.400	ENSCHIG00000026214	RBM47	100	91.906	Capra_hircus
ENSMODG00000007003	RBM47	86	88.053	ENSTSYG00000033612	RBM47	93	88.053	Carlito_syrichta
ENSMODG00000007003	RBM47	100	82.799	ENSCAPG00000008426	RBM47	100	84.564	Cavia_aperea
ENSMODG00000007003	RBM47	100	89.207	ENSCPOG00000014100	RBM47	100	91.467	Cavia_porcellus
ENSMODG00000007003	RBM47	99	63.025	ENSCCAG00000024397	-	99	63.025	Cebus_capucinus
ENSMODG00000007003	RBM47	100	91.092	ENSCCAG00000030129	-	100	92.800	Cebus_capucinus
ENSMODG00000007003	RBM47	100	91.246	ENSCATG00000042064	RBM47	100	92.800	Cercocebus_atys
ENSMODG00000007003	RBM47	100	89.376	ENSCLAG00000001684	RBM47	100	91.467	Chinchilla_lanigera
ENSMODG00000007003	RBM47	100	91.246	ENSCSAG00000017060	RBM47	100	91.414	Chlorocebus_sabaeus
ENSMODG00000007003	RBM47	88	85.135	ENSCHOG00000011731	RBM47	88	86.261	Choloepus_hoffmanni
ENSMODG00000007003	RBM47	100	91.820	ENSCPBG00000013831	RBM47	100	91.987	Chrysemys_picta_bellii
ENSMODG00000007003	RBM47	100	91.246	ENSCANG00000019997	RBM47	100	92.800	Colobus_angolensis_palliatus
ENSMODG00000007003	RBM47	100	89.430	ENSCGRG00001000623	-	100	92.021	Cricetulus_griseus_chok1gshd
ENSMODG00000007003	RBM47	89	87.566	ENSCGRG00001020102	-	100	87.566	Cricetulus_griseus_chok1gshd
ENSMODG00000007003	RBM47	89	87.037	ENSCGRG00000014760	-	100	87.037	Cricetulus_griseus_crigri
ENSMODG00000007003	RBM47	100	88.591	ENSCGRG00000007762	-	100	89.873	Cricetulus_griseus_crigri
ENSMODG00000007003	RBM47	100	74.958	ENSCSEG00000004545	rbm47	100	76.040	Cynoglossus_semilaevis
ENSMODG00000007003	RBM47	100	75.839	ENSCVAG00000020144	rbm47	100	82.353	Cyprinodon_variegatus
ENSMODG00000007003	RBM47	100	76.847	ENSDARG00000061985	rbm47	100	77.504	Danio_rerio
ENSMODG00000007003	RBM47	100	89.713	ENSDNOG00000046854	RBM47	100	90.388	Dasypus_novemcinctus
ENSMODG00000007003	RBM47	100	90.955	ENSDORG00000010144	Rbm47	100	90.787	Dipodomys_ordii
ENSMODG00000007003	RBM47	100	90.268	ENSETEG00000009194	RBM47	100	90.940	Echinops_telfairi
ENSMODG00000007003	RBM47	99	57.025	ENSEBUG00000011912	rbm47	99	57.686	Eptatretus_burgeri
ENSMODG00000007003	RBM47	100	91.568	ENSEASG00005008443	RBM47	100	91.737	Equus_asinus_asinus
ENSMODG00000007003	RBM47	100	91.568	ENSECAG00000004400	RBM47	100	91.737	Equus_caballus
ENSMODG00000007003	RBM47	75	90.909	ENSEEUG00000001194	RBM47	75	90.909	Erinaceus_europaeus
ENSMODG00000007003	RBM47	100	75.689	ENSELUG00000006148	rbm47	100	82.368	Esox_lucius
ENSMODG00000007003	RBM47	100	91.892	ENSFCAG00000012399	RBM47	100	91.723	Felis_catus
ENSMODG00000007003	RBM47	100	90.436	ENSFALG00000002861	RBM47	100	91.611	Ficedula_albicollis
ENSMODG00000007003	RBM47	100	88.364	ENSFDAG00000016326	RBM47	100	87.858	Fukomys_damarensis
ENSMODG00000007003	RBM47	100	77.722	ENSFHEG00000007938	rbm47	100	76.884	Fundulus_heteroclitus
ENSMODG00000007003	RBM47	100	76.136	ENSGMOG00000014802	rbm47	100	76.136	Gadus_morhua
ENSMODG00000007003	RBM47	63	93.103	ENSGALG00000014267	RBM47	99	94.430	Gallus_gallus
ENSMODG00000007003	RBM47	63	84.267	ENSGAFG00000020571	rbm47	98	84.043	Gambusia_affinis
ENSMODG00000007003	RBM47	100	74.919	ENSGACG00000016223	rbm47	100	81.122	Gasterosteus_aculeatus
ENSMODG00000007003	RBM47	100	91.987	ENSGAGG00000020051	RBM47	100	92.154	Gopherus_agassizii
ENSMODG00000007003	RBM47	100	91.246	ENSGGOG00000001367	RBM47	100	92.800	Gorilla_gorilla
ENSMODG00000007003	RBM47	100	76.634	ENSHBUG00000003520	rbm47	100	83.333	Haplochromis_burtoni
ENSMODG00000007003	RBM47	84	80.800	ENSHGLG00000016914	RBM47	100	89.241	Heterocephalus_glaber_female
ENSMODG00000007003	RBM47	100	88.682	ENSHGLG00100014028	-	100	89.241	Heterocephalus_glaber_male
ENSMODG00000007003	RBM47	100	80.574	ENSHGLG00100003071	-	100	80.574	Heterocephalus_glaber_male
ENSMODG00000007003	RBM47	99	77.258	ENSHCOG00000002074	rbm47	99	82.609	Hippocampus_comes
ENSMODG00000007003	RBM47	100	79.599	ENSIPUG00000004743	rbm47	100	79.599	Ictalurus_punctatus
ENSMODG00000007003	RBM47	100	90.252	ENSSTOG00000004727	RBM47	100	91.733	Ictidomys_tridecemlineatus
ENSMODG00000007003	RBM47	100	89.430	ENSJJAG00000013823	Rbm47	100	90.268	Jaculus_jaculus
ENSMODG00000007003	RBM47	100	78.667	ENSKMAG00000000084	rbm47	100	81.934	Kryptolebias_marmoratus
ENSMODG00000007003	RBM47	100	77.462	ENSLBEG00000008436	rbm47	100	81.330	Labrus_bergylta
ENSMODG00000007003	RBM47	100	85.906	ENSLACG00000007196	RBM47	100	85.906	Latimeria_chalumnae
ENSMODG00000007003	RBM47	100	84.396	ENSLOCG00000012966	rbm47	95	84.060	Lepisosteus_oculatus
ENSMODG00000007003	RBM47	100	90.404	ENSLAFG00000011998	RBM47	100	90.404	Loxodonta_africana
ENSMODG00000007003	RBM47	100	91.246	ENSMFAG00000037967	RBM47	100	92.800	Macaca_fascicularis
ENSMODG00000007003	RBM47	100	91.246	ENSMMUG00000012036	RBM47	100	92.228	Macaca_mulatta
ENSMODG00000007003	RBM47	100	91.246	ENSMNEG00000040774	RBM47	100	92.800	Macaca_nemestrina
ENSMODG00000007003	RBM47	100	94.603	ENSMLEG00000041432	RBM47	100	94.603	Mandrillus_leucophaeus
ENSMODG00000007003	RBM47	100	77.377	ENSMAMG00000019143	rbm47	99	83.505	Mastacembelus_armatus
ENSMODG00000007003	RBM47	100	76.721	ENSMZEG00005023659	rbm47	99	83.333	Maylandia_zebra
ENSMODG00000007003	RBM47	100	90.150	ENSMGAG00000012226	RBM47	100	90.818	Meleagris_gallopavo
ENSMODG00000007003	RBM47	100	89.412	ENSMAUG00000006493	Rbm47	100	91.512	Mesocricetus_auratus
ENSMODG00000007003	RBM47	100	85.980	ENSMICG00000026417	RBM47	100	86.207	Microcebus_murinus
ENSMODG00000007003	RBM47	100	90.067	ENSMOCG00000021170	Rbm47	100	92.287	Microtus_ochrogaster
ENSMODG00000007003	RBM47	100	77.414	ENSMMOG00000007260	rbm47	100	76.759	Mola_mola
ENSMODG00000007003	RBM47	100	77.667	ENSMALG00000005167	rbm47	100	81.748	Monopterus_albus
ENSMODG00000007003	RBM47	100	89.882	MGP_CAROLIEiJ_G0027258	Rbm47	100	90.957	Mus_caroli
ENSMODG00000007003	RBM47	100	89.882	ENSMUSG00000070780	Rbm47	100	91.223	Mus_musculus
ENSMODG00000007003	RBM47	100	89.882	MGP_PahariEiJ_G0017040	Rbm47	100	91.223	Mus_pahari
ENSMODG00000007003	RBM47	100	89.376	MGP_SPRETEiJ_G0028253	Rbm47	100	91.223	Mus_spretus
ENSMODG00000007003	RBM47	100	90.894	ENSMPUG00000006177	RBM47	94	91.400	Mustela_putorius_furo
ENSMODG00000007003	RBM47	100	88.552	ENSMLUG00000000889	RBM47	100	89.394	Myotis_lucifugus
ENSMODG00000007003	RBM47	100	89.580	ENSNGAG00000003325	Rbm47	100	90.420	Nannospalax_galili
ENSMODG00000007003	RBM47	100	76.759	ENSNBRG00000015092	rbm47	100	77.199	Neolamprologus_brichardi
ENSMODG00000007003	RBM47	100	90.909	ENSNLEG00000017151	RBM47	100	92.800	Nomascus_leucogenys
ENSMODG00000007003	RBM47	72	92.075	ENSMEUG00000009516	-	100	92.075	Notamacropus_eugenii
ENSMODG00000007003	RBM47	75	92.946	ENSOPRG00000016507	-	75	92.946	Ochotona_princeps
ENSMODG00000007003	RBM47	100	89.545	ENSODEG00000004873	RBM47	100	89.882	Octodon_degus
ENSMODG00000007003	RBM47	100	76.634	ENSONIG00000009061	rbm47	100	76.020	Oreochromis_niloticus
ENSMODG00000007003	RBM47	100	88.815	ENSOANG00000008978	RBM47	100	90.150	Ornithorhynchus_anatinus
ENSMODG00000007003	RBM47	100	91.568	ENSOCUG00000012034	RBM47	100	91.400	Oryctolagus_cuniculus
ENSMODG00000007003	RBM47	100	77.205	ENSORLG00000005847	rbm47	100	83.077	Oryzias_latipes
ENSMODG00000007003	RBM47	100	77.371	ENSORLG00020005154	rbm47	100	83.077	Oryzias_latipes_hni
ENSMODG00000007003	RBM47	100	77.704	ENSORLG00015000066	rbm47	100	83.333	Oryzias_latipes_hsok
ENSMODG00000007003	RBM47	100	78.130	ENSOMEG00000010730	rbm47	100	77.629	Oryzias_melastigma
ENSMODG00000007003	RBM47	100	91.062	ENSOGAG00000029367	-	100	91.568	Otolemur_garnettii
ENSMODG00000007003	RBM47	100	83.953	ENSOGAG00000025193	-	100	84.291	Otolemur_garnettii
ENSMODG00000007003	RBM47	100	82.462	ENSOARG00000012711	RBM47	100	83.250	Ovis_aries
ENSMODG00000007003	RBM47	100	91.077	ENSPPAG00000029763	RBM47	100	91.246	Pan_paniscus
ENSMODG00000007003	RBM47	100	88.682	ENSPPRG00000012873	RBM47	100	92.267	Panthera_pardus
ENSMODG00000007003	RBM47	85	88.867	ENSPTIG00000017046	RBM47	100	88.668	Panthera_tigris_altaica
ENSMODG00000007003	RBM47	100	91.246	ENSPTRG00000016006	RBM47	100	92.800	Pan_troglodytes
ENSMODG00000007003	RBM47	100	91.246	ENSPANG00000005980	RBM47	100	92.800	Papio_anubis
ENSMODG00000007003	RBM47	85	88.136	ENSPKIG00000013431	RBM47	98	83.679	Paramormyrops_kingsleyae
ENSMODG00000007003	RBM47	96	78.049	ENSPKIG00000005037	rbm47	100	76.159	Paramormyrops_kingsleyae
ENSMODG00000007003	RBM47	89	92.655	ENSPSIG00000017516	RBM47	97	92.467	Pelodiscus_sinensis
ENSMODG00000007003	RBM47	100	75.920	ENSPMGG00000018540	rbm47	100	76.667	Periophthalmus_magnuspinnatus
ENSMODG00000007003	RBM47	100	89.748	ENSPEMG00000011088	Rbm47	100	91.489	Peromyscus_maniculatus_bairdii
ENSMODG00000007003	RBM47	96	80.069	ENSPFOG00000007997	rbm47	100	76.710	Poecilia_formosa
ENSMODG00000007003	RBM47	96	80.035	ENSPLAG00000002072	rbm47	100	84.000	Poecilia_latipinna
ENSMODG00000007003	RBM47	100	79.097	ENSPMEG00000017492	rbm47	100	82.097	Poecilia_mexicana
ENSMODG00000007003	RBM47	96	80.035	ENSPREG00000008456	rbm47	100	84.000	Poecilia_reticulata
ENSMODG00000007003	RBM47	98	79.357	ENSPPYG00000014688	RBM47	100	79.188	Pongo_abelii
ENSMODG00000007003	RBM47	81	92.750	ENSPCAG00000011879	RBM47	81	92.750	Procavia_capensis
ENSMODG00000007003	RBM47	100	87.500	ENSPCOG00000023451	RBM47	100	88.007	Propithecus_coquereli
ENSMODG00000007003	RBM47	100	90.404	ENSPVAG00000003812	RBM47	100	91.246	Pteropus_vampyrus
ENSMODG00000007003	RBM47	100	76.346	ENSPNYG00000022868	rbm47	100	76.948	Pundamilia_nyererei
ENSMODG00000007003	RBM47	100	76.432	ENSPNAG00000007940	rbm47	100	77.250	Pygocentrus_nattereri
ENSMODG00000007003	RBM47	100	90.051	ENSRNOG00000002408	Rbm47	100	90.556	Rattus_norvegicus
ENSMODG00000007003	RBM47	100	91.246	ENSRBIG00000039601	RBM47	100	92.800	Rhinopithecus_bieti
ENSMODG00000007003	RBM47	100	91.246	ENSRROG00000044696	RBM47	100	92.800	Rhinopithecus_roxellana
ENSMODG00000007003	RBM47	100	87.162	ENSSBOG00000028475	RBM47	100	91.942	Saimiri_boliviensis_boliviensis
ENSMODG00000007003	RBM47	100	96.115	ENSSHAG00000017576	RBM47	100	96.115	Sarcophilus_harrisii
ENSMODG00000007003	RBM47	100	75.288	ENSSFOG00015012445	rbm47	100	75.618	Scleropages_formosus
ENSMODG00000007003	RBM47	100	74.916	ENSSFOG00015024101	RBM47	100	75.418	Scleropages_formosus
ENSMODG00000007003	RBM47	100	75.654	ENSSMAG00000009744	rbm47	100	81.234	Scophthalmus_maximus
ENSMODG00000007003	RBM47	100	78.392	ENSSDUG00000022684	rbm47	100	77.722	Seriola_dumerili
ENSMODG00000007003	RBM47	100	78.798	ENSSLDG00000003109	rbm47	100	81.519	Seriola_lalandi_dorsalis
ENSMODG00000007003	RBM47	84	91.518	ENSSARG00000001735	RBM47	84	91.759	Sorex_araneus
ENSMODG00000007003	RBM47	100	89.262	ENSSPUG00000007515	RBM47	100	93.867	Sphenodon_punctatus
ENSMODG00000007003	RBM47	100	79.466	ENSSPAG00000001257	rbm47	100	82.864	Stegastes_partitus
ENSMODG00000007003	RBM47	100	90.894	ENSSSCG00000008796	RBM47	100	91.400	Sus_scrofa
ENSMODG00000007003	RBM47	100	90.101	ENSTGUG00000008705	RBM47	100	91.275	Taeniopygia_guttata
ENSMODG00000007003	RBM47	100	76.923	ENSTRUG00000014050	rbm47	100	76.421	Takifugu_rubripes
ENSMODG00000007003	RBM47	100	74.795	ENSTNIG00000006127	rbm47	100	75.574	Tetraodon_nigroviridis
ENSMODG00000007003	RBM47	77	85.867	ENSTBEG00000001607	RBM47	76	86.133	Tupaia_belangeri
ENSMODG00000007003	RBM47	100	90.219	ENSTTRG00000002839	RBM47	100	91.062	Tursiops_truncatus
ENSMODG00000007003	RBM47	100	91.400	ENSUAMG00000021346	RBM47	100	91.400	Ursus_americanus
ENSMODG00000007003	RBM47	57	90.000	ENSVPAG00000000641	-	57	90.000	Vicugna_pacos
ENSMODG00000007003	RBM47	96	90.877	ENSVVUG00000014774	RBM47	100	89.057	Vulpes_vulpes
ENSMODG00000007003	RBM47	100	86.218	ENSXETG00000012802	rbm47	100	86.387	Xenopus_tropicalis
ENSMODG00000007003	RBM47	88	84.000	ENSXCOG00000000780	rbm47	100	84.000	Xiphophorus_couchianus
ENSMODG00000007003	RBM47	100	77.387	ENSXMAG00000009874	rbm47	100	81.841	Xiphophorus_maculatus