EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000007027 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 1217 bases
Position: chr2:147260987-147262203
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000008714	RRM_1	PF00076.22	5.9e-11	1	1
ENSMODP00000008714	RRM_3	PF08777.11	5.9e-26	1	1
ENSMODP00000008714	La	PF05383.17	1.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000008886	-	1041	-	ENSMODP00000008714	346 (aa)	-	F6UFU6

Gene Model

Click here to download ENSMODG00000007027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000007027's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000007027	-	100	91.040	ENSMODG00000019271	-	100	91.040
ENSMODG00000007027	-	100	72.861	ENSMODG00000008227	-	100	74.328

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000007027	-	100	81.761	ENSG00000138385	SSB	90	83.333	Homo_sapiens
ENSMODG00000007027	-	99	44.581	ENSAPOG00000003448	ssb	85	54.706	Acanthochromis_polyacanthus
ENSMODG00000007027	-	99	80.503	ENSAMEG00000010507	SSB	85	80.503	Ailuropoda_melanoleuca
ENSMODG00000007027	-	91	46.917	ENSACIG00000001738	ssb	88	53.659	Amphilophus_citrinellus
ENSMODG00000007027	-	99	44.581	ENSAOCG00000020398	ssb	100	36.453	Amphiprion_ocellaris
ENSMODG00000007027	-	99	45.074	ENSAPEG00000020395	ssb	100	36.946	Amphiprion_percula
ENSMODG00000007027	-	99	46.305	ENSATEG00000016884	ssb	100	45.567	Anabas_testudineus
ENSMODG00000007027	-	100	53.774	ENSAPLG00000006109	SSB	100	54.245	Anas_platyrhynchos
ENSMODG00000007027	-	99	70.440	ENSACAG00000017008	SSB	99	53.171	Anolis_carolinensis
ENSMODG00000007027	-	100	61.111	ENSANAG00000027195	-	100	61.111	Aotus_nancymaae
ENSMODG00000007027	-	99	43.317	ENSACLG00000010798	ssb	100	42.079	Astatotilapia_calliptera
ENSMODG00000007027	-	98	40.931	ENSAMXG00000012606	ssb	100	41.262	Astyanax_mexicanus
ENSMODG00000007027	-	99	80.503	ENSBTAG00000008716	SSB	85	80.503	Bos_taurus
ENSMODG00000007027	-	100	81.132	ENSCJAG00000045073	SSB	86	81.132	Callithrix_jacchus
ENSMODG00000007027	-	100	65.025	ENSCAFG00000012418	SSB	100	65.025	Canis_familiaris
ENSMODG00000007027	-	100	65.025	ENSCAFG00020002900	SSB	100	65.025	Canis_lupus_dingo
ENSMODG00000007027	-	99	77.987	ENSCHIG00000022196	-	84	77.987	Capra_hircus
ENSMODG00000007027	-	99	80.503	ENSCHIG00000022624	-	85	80.503	Capra_hircus
ENSMODG00000007027	-	99	81.132	ENSTSYG00000000097	SSB	100	68.299	Carlito_syrichta
ENSMODG00000007027	-	99	80.503	ENSCPOG00000003338	SSB	100	67.677	Cavia_porcellus
ENSMODG00000007027	-	100	81.761	ENSCCAG00000035147	SSB	86	81.761	Cebus_capucinus
ENSMODG00000007027	-	67	90.909	ENSCATG00000036701	SSB	67	90.909	Cercocebus_atys
ENSMODG00000007027	-	100	57.382	ENSCATG00000042909	-	100	57.382	Cercocebus_atys
ENSMODG00000007027	-	99	79.874	ENSCLAG00000015617	-	85	79.874	Chinchilla_lanigera
ENSMODG00000007027	-	100	82.390	ENSCSAG00000015200	SSB	76	82.390	Chlorocebus_sabaeus
ENSMODG00000007027	-	98	61.013	ENSCSAG00000018390	-	100	57.975	Chlorocebus_sabaeus
ENSMODG00000007027	-	99	81.761	ENSCHOG00000007763	SSB	85	81.761	Choloepus_hoffmanni
ENSMODG00000007027	-	100	62.103	ENSCPBG00000006519	SSB	100	62.836	Chrysemys_picta_bellii
ENSMODG00000007027	-	100	81.761	ENSCANG00000027695	SSB	86	81.761	Colobus_angolensis_palliatus
ENSMODG00000007027	-	100	60.411	ENSCANG00000033240	-	100	60.411	Colobus_angolensis_palliatus
ENSMODG00000007027	-	95	52.011	ENSCANG00000028838	-	92	52.011	Colobus_angolensis_palliatus
ENSMODG00000007027	-	100	57.702	ENSCGRG00001024831	Ssb	100	57.702	Cricetulus_griseus_chok1gshd
ENSMODG00000007027	-	100	57.702	ENSCGRG00000005387	Ssb	100	57.702	Cricetulus_griseus_crigri
ENSMODG00000007027	-	97	45.363	ENSCSEG00000011599	ssb	87	53.988	Cynoglossus_semilaevis
ENSMODG00000007027	-	99	44.608	ENSCVAG00000021558	ssb	86	55.882	Cyprinodon_variegatus
ENSMODG00000007027	-	98	44.279	ENSDARG00000029252	ssb	99	36.543	Danio_rerio
ENSMODG00000007027	-	99	81.132	ENSDNOG00000013450	SSB	85	81.132	Dasypus_novemcinctus
ENSMODG00000007027	-	100	63.027	ENSDORG00000005543	Ssb	100	62.283	Dipodomys_ordii
ENSMODG00000007027	-	89	39.394	ENSEBUG00000001237	ssb	94	39.118	Eptatretus_burgeri
ENSMODG00000007027	-	99	81.132	ENSEASG00005022835	SSB	85	81.132	Equus_asinus_asinus
ENSMODG00000007027	-	99	81.132	ENSECAG00000018495	SSB	85	81.132	Equus_caballus
ENSMODG00000007027	-	71	57.554	ENSEEUG00000008077	SSB	78	57.554	Erinaceus_europaeus
ENSMODG00000007027	-	99	57.059	ENSELUG00000020929	ssb	87	57.059	Esox_lucius
ENSMODG00000007027	-	99	81.132	ENSFCAG00000011601	SSB	85	81.132	Felis_catus
ENSMODG00000007027	-	100	58.333	ENSFALG00000000930	SSB	100	58.333	Ficedula_albicollis
ENSMODG00000007027	-	99	79.874	ENSFDAG00000000598	SSB	85	79.874	Fukomys_damarensis
ENSMODG00000007027	-	65	60.241	ENSFHEG00000003268	ssb	95	51.908	Fundulus_heteroclitus
ENSMODG00000007027	-	97	44.527	ENSGMOG00000002664	ssb	99	43.532	Gadus_morhua
ENSMODG00000007027	-	100	57.843	ENSGALG00000009677	SSB	100	57.108	Gallus_gallus
ENSMODG00000007027	-	99	50.279	ENSGAFG00000002749	ssb	100	41.872	Gambusia_affinis
ENSMODG00000007027	-	99	46.457	ENSGACG00000005107	ssb	100	45.932	Gasterosteus_aculeatus
ENSMODG00000007027	-	100	61.858	ENSGAGG00000007807	SSB	100	62.592	Gopherus_agassizii
ENSMODG00000007027	-	55	72.396	ENSGGOG00000023471	-	78	73.057	Gorilla_gorilla
ENSMODG00000007027	-	100	55.303	ENSGGOG00000024891	-	100	55.303	Gorilla_gorilla
ENSMODG00000007027	-	99	42.327	ENSHBUG00000006584	ssb	100	41.832	Haplochromis_burtoni
ENSMODG00000007027	-	99	72.327	ENSHGLG00000004478	-	85	72.327	Heterocephalus_glaber_female
ENSMODG00000007027	-	100	61.209	ENSHGLG00000005832	-	100	61.209	Heterocephalus_glaber_female
ENSMODG00000007027	-	50	70.930	ENSHGLG00000001810	-	79	70.930	Heterocephalus_glaber_female
ENSMODG00000007027	-	56	73.504	ENSHGLG00000011331	-	98	75.000	Heterocephalus_glaber_female
ENSMODG00000007027	-	99	79.874	ENSHGLG00000017580	-	85	79.874	Heterocephalus_glaber_female
ENSMODG00000007027	-	100	59.548	ENSHGLG00100008767	-	100	59.548	Heterocephalus_glaber_male
ENSMODG00000007027	-	55	64.583	ENSHGLG00100014205	-	99	64.583	Heterocephalus_glaber_male
ENSMODG00000007027	-	99	79.874	ENSHGLG00100003084	-	85	79.874	Heterocephalus_glaber_male
ENSMODG00000007027	-	97	45.844	ENSHCOG00000019011	ssb	99	37.028	Hippocampus_comes
ENSMODG00000007027	-	97	59.494	ENSIPUG00000003681	SSB	99	46.269	Ictalurus_punctatus
ENSMODG00000007027	-	99	81.132	ENSSTOG00000008416	SSB	85	81.132	Ictidomys_tridecemlineatus
ENSMODG00000007027	-	99	48.346	ENSJJAG00000016250	-	99	48.346	Jaculus_jaculus
ENSMODG00000007027	-	100	56.295	ENSJJAG00000023158	-	100	55.107	Jaculus_jaculus
ENSMODG00000007027	-	99	56.471	ENSKMAG00000017317	ssb	100	38.821	Kryptolebias_marmoratus
ENSMODG00000007027	-	99	43.596	ENSLBEG00000017345	ssb	91	50.777	Labrus_bergylta
ENSMODG00000007027	-	99	65.089	ENSLACG00000014056	SSB	87	65.089	Latimeria_chalumnae
ENSMODG00000007027	-	97	53.117	ENSLOCG00000007933	ssb	99	53.367	Lepisosteus_oculatus
ENSMODG00000007027	-	99	81.132	ENSLAFG00000000867	-	86	81.132	Loxodonta_africana
ENSMODG00000007027	-	100	53.333	ENSLAFG00000028909	-	100	53.333	Loxodonta_africana
ENSMODG00000007027	-	70	50.680	ENSLAFG00000026721	-	99	50.680	Loxodonta_africana
ENSMODG00000007027	-	86	63.690	ENSMFAG00000041478	-	100	63.690	Macaca_fascicularis
ENSMODG00000007027	-	100	81.761	ENSMFAG00000039066	SSB	86	81.761	Macaca_fascicularis
ENSMODG00000007027	-	100	81.761	ENSMMUG00000023051	SSB	86	81.761	Macaca_mulatta
ENSMODG00000007027	-	99	52.000	ENSMMUG00000039889	-	100	52.000	Macaca_mulatta
ENSMODG00000007027	-	100	62.597	ENSMMUG00000011724	-	97	62.597	Macaca_mulatta
ENSMODG00000007027	-	86	63.690	ENSMNEG00000034698	-	100	63.690	Macaca_nemestrina
ENSMODG00000007027	-	100	65.312	ENSMNEG00000028321	SSB	100	64.946	Macaca_nemestrina
ENSMODG00000007027	-	100	81.761	ENSMLEG00000035717	SSB	86	81.761	Mandrillus_leucophaeus
ENSMODG00000007027	-	100	52.083	ENSMLEG00000042644	-	100	51.302	Mandrillus_leucophaeus
ENSMODG00000007027	-	99	56.471	ENSMAMG00000004800	ssb	86	56.471	Mastacembelus_armatus
ENSMODG00000007027	-	99	43.317	ENSMZEG00005005749	ssb	100	42.079	Maylandia_zebra
ENSMODG00000007027	-	100	57.598	ENSMGAG00000010328	SSB	100	57.353	Meleagris_gallopavo
ENSMODG00000007027	-	98	64.304	ENSMICG00000033304	-	93	67.529	Microcebus_murinus
ENSMODG00000007027	-	99	63.524	ENSMICG00000028252	-	99	63.524	Microcebus_murinus
ENSMODG00000007027	-	88	48.725	ENSMALG00000008045	ssb	89	49.722	Monopterus_albus
ENSMODG00000007027	-	100	57.381	MGP_CAROLIEiJ_G0023629	-	98	75.641	Mus_caroli
ENSMODG00000007027	-	100	57.143	ENSMUSG00000068882	Ssb	98	75.641	Mus_musculus
ENSMODG00000007027	-	100	57.143	MGP_PahariEiJ_G0025081	-	98	74.359	Mus_pahari
ENSMODG00000007027	-	100	57.143	MGP_SPRETEiJ_G0024551	Ssb	98	75.641	Mus_spretus
ENSMODG00000007027	-	99	81.132	ENSMPUG00000000785	SSB	85	81.132	Mustela_putorius_furo
ENSMODG00000007027	-	99	80.503	ENSMLUG00000016316	SSB	86	80.503	Myotis_lucifugus
ENSMODG00000007027	-	99	43.069	ENSNBRG00000012661	ssb	100	42.327	Neolamprologus_brichardi
ENSMODG00000007027	-	100	81.761	ENSNLEG00000004958	SSB	86	81.761	Nomascus_leucogenys
ENSMODG00000007027	-	100	51.928	ENSNLEG00000028754	-	100	51.928	Nomascus_leucogenys
ENSMODG00000007027	-	54	64.777	ENSMEUG00000001650	-	99	64.777	Notamacropus_eugenii
ENSMODG00000007027	-	66	90.909	ENSOPRG00000008475	-	79	90.909	Ochotona_princeps
ENSMODG00000007027	-	50	75.581	ENSODEG00000010185	-	98	76.923	Octodon_degus
ENSMODG00000007027	-	92	81.061	ENSODEG00000004202	-	83	81.061	Octodon_degus
ENSMODG00000007027	-	99	43.069	ENSONIG00000008776	ssb	100	42.822	Oreochromis_niloticus
ENSMODG00000007027	-	100	64.691	ENSOANG00000008543	SSB	100	64.691	Ornithorhynchus_anatinus
ENSMODG00000007027	-	99	82.390	ENSOCUG00000010396	SSB	86	82.390	Oryctolagus_cuniculus
ENSMODG00000007027	-	99	46.305	ENSORLG00000017208	ssb	100	46.798	Oryzias_latipes
ENSMODG00000007027	-	99	46.305	ENSORLG00020022574	ssb	100	46.552	Oryzias_latipes_hni
ENSMODG00000007027	-	99	46.552	ENSORLG00015016592	ssb	100	46.552	Oryzias_latipes_hsok
ENSMODG00000007027	-	99	47.654	ENSOMEG00000003193	ssb	91	54.494	Oryzias_melastigma
ENSMODG00000007027	-	99	80.503	ENSOGAG00000029768	SSB	86	80.503	Otolemur_garnettii
ENSMODG00000007027	-	99	80.503	ENSOARG00000002906	SSB	85	80.503	Ovis_aries
ENSMODG00000007027	-	100	81.761	ENSPPAG00000042673	SSB	86	81.761	Pan_paniscus
ENSMODG00000007027	-	90	52.589	ENSPPAG00000006189	-	96	52.589	Pan_paniscus
ENSMODG00000007027	-	100	57.252	ENSPPAG00000032427	-	100	71.318	Pan_paniscus
ENSMODG00000007027	-	99	81.132	ENSPPRG00000006599	SSB	85	81.132	Panthera_pardus
ENSMODG00000007027	-	99	81.132	ENSPTIG00000011021	SSB	83	81.132	Panthera_tigris_altaica
ENSMODG00000007027	-	100	81.761	ENSPTRG00000012620	SSB	86	81.761	Pan_troglodytes
ENSMODG00000007027	-	100	57.029	ENSPTRG00000042880	-	100	57.029	Pan_troglodytes
ENSMODG00000007027	-	95	50.954	ENSPANG00000031877	-	91	50.954	Papio_anubis
ENSMODG00000007027	-	100	81.761	ENSPANG00000007440	SSB	86	81.761	Papio_anubis
ENSMODG00000007027	-	100	54.201	ENSPANG00000034126	-	100	54.472	Papio_anubis
ENSMODG00000007027	-	99	60.479	ENSPKIG00000019325	ssb	97	50.681	Paramormyrops_kingsleyae
ENSMODG00000007027	-	100	59.169	ENSPSIG00000002265	SSB	93	59.658	Pelodiscus_sinensis
ENSMODG00000007027	-	82	52.174	ENSPMGG00000020075	ssb	93	43.020	Periophthalmus_magnuspinnatus
ENSMODG00000007027	-	78	42.462	ENSPMAG00000002982	ssb	89	41.270	Petromyzon_marinus
ENSMODG00000007027	-	100	71.182	ENSPCIG00000028591	-	100	72.660	Phascolarctos_cinereus
ENSMODG00000007027	-	99	38.575	ENSPFOG00000009650	ssb	100	38.329	Poecilia_formosa
ENSMODG00000007027	-	88	39.402	ENSPLAG00000020498	ssb	100	42.752	Poecilia_latipinna
ENSMODG00000007027	-	99	38.424	ENSPMEG00000001051	ssb	100	38.177	Poecilia_mexicana
ENSMODG00000007027	-	90	38.874	ENSPREG00000003708	ssb	97	38.874	Poecilia_reticulata
ENSMODG00000007027	-	100	81.761	ENSPPYG00000012919	SSB	86	81.761	Pongo_abelii
ENSMODG00000007027	-	93	64.000	ENSPCAG00000010276	SSB	99	64.000	Procavia_capensis
ENSMODG00000007027	-	100	62.000	ENSPCOG00000015741	-	92	74.138	Propithecus_coquereli
ENSMODG00000007027	-	100	63.613	ENSPCOG00000023189	-	100	63.613	Propithecus_coquereli
ENSMODG00000007027	-	84	83.088	ENSPVAG00000006615	SSB	82	83.088	Pteropus_vampyrus
ENSMODG00000007027	-	99	43.317	ENSPNYG00000006444	ssb	100	42.079	Pundamilia_nyererei
ENSMODG00000007027	-	98	45.320	ENSPNAG00000011708	ssb	100	46.098	Pygocentrus_nattereri
ENSMODG00000007027	-	100	56.429	ENSRNOG00000007998	Ssb	100	55.819	Rattus_norvegicus
ENSMODG00000007027	-	100	56.511	ENSRNOG00000011606	AABR07061825.1	100	55.637	Rattus_norvegicus
ENSMODG00000007027	-	87	76.724	ENSRBIG00000041608	-	82	76.724	Rhinopithecus_bieti
ENSMODG00000007027	-	100	54.902	ENSRBIG00000029918	-	100	54.902	Rhinopithecus_bieti
ENSMODG00000007027	-	100	65.365	ENSRBIG00000041972	SSB	88	78.261	Rhinopithecus_bieti
ENSMODG00000007027	-	92	59.780	ENSRBIG00000041232	-	93	68.243	Rhinopithecus_bieti
ENSMODG00000007027	-	97	60.000	ENSRROG00000031684	-	100	60.000	Rhinopithecus_roxellana
ENSMODG00000007027	-	100	54.987	ENSRROG00000007149	-	100	54.987	Rhinopithecus_roxellana
ENSMODG00000007027	-	97	73.016	ENSRROG00000034102	-	83	73.016	Rhinopithecus_roxellana
ENSMODG00000007027	-	100	81.761	ENSRROG00000040346	SSB	86	81.761	Rhinopithecus_roxellana
ENSMODG00000007027	-	100	81.761	ENSSBOG00000027204	SSB	86	81.761	Saimiri_boliviensis_boliviensis
ENSMODG00000007027	-	100	70.690	ENSSHAG00000018062	SSB	100	72.167	Sarcophilus_harrisii
ENSMODG00000007027	-	99	50.244	ENSSFOG00015000550	ssb	100	49.512	Scleropages_formosus
ENSMODG00000007027	-	98	47.258	ENSSMAG00000013885	ssb	100	47.287	Scophthalmus_maximus
ENSMODG00000007027	-	99	45.567	ENSSDUG00000020117	ssb	100	37.438	Seriola_dumerili
ENSMODG00000007027	-	99	48.579	ENSSLDG00000002525	ssb	100	48.579	Seriola_lalandi_dorsalis
ENSMODG00000007027	-	93	72.973	ENSSARG00000007747	SSB	84	72.973	Sorex_araneus
ENSMODG00000007027	-	100	61.425	ENSSPUG00000012112	SSB	100	61.425	Sphenodon_punctatus
ENSMODG00000007027	-	98	37.562	ENSSPAG00000005696	ssb	100	38.329	Stegastes_partitus
ENSMODG00000007027	-	99	54.863	ENSSSCG00000015938	SSB	99	54.863	Sus_scrofa
ENSMODG00000007027	-	100	57.213	ENSTGUG00000007942	SSB	100	57.213	Taeniopygia_guttata
ENSMODG00000007027	-	99	39.356	ENSTRUG00000017839	ssb	100	39.109	Takifugu_rubripes
ENSMODG00000007027	-	89	46.739	ENSTNIG00000000915	ssb	100	45.600	Tetraodon_nigroviridis
ENSMODG00000007027	-	86	78.261	ENSTBEG00000009056	SSB	76	78.261	Tupaia_belangeri
ENSMODG00000007027	-	99	80.503	ENSTTRG00000002152	SSB	85	80.503	Tursiops_truncatus
ENSMODG00000007027	-	92	80.503	ENSUAMG00000027833	SSB	84	80.503	Ursus_americanus
ENSMODG00000007027	-	99	80.503	ENSUMAG00000013907	SSB	85	80.503	Ursus_maritimus
ENSMODG00000007027	-	99	81.132	ENSVPAG00000007183	SSB	85	81.132	Vicugna_pacos
ENSMODG00000007027	-	100	65.271	ENSVVUG00000016573	SSB	78	65.271	Vulpes_vulpes
ENSMODG00000007027	-	97	48.354	ENSXETG00000025402	ssb	81	65.269	Xenopus_tropicalis
ENSMODG00000007027	-	93	43.651	ENSXCOG00000019109	ssb	93	53.906	Xiphophorus_couchianus
ENSMODG00000007027	-	99	44.089	ENSXMAG00000004888	ssb	100	41.872	Xiphophorus_maculatus