EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMODG00000007123 (Gene tree)
Gene ID
100013834
Gene Symbol
CPSF6
Alias
-
Full Name
Monodelphis domestica cleavage and polyadenylation specific factor 6 (CPSF6)%2C mRNA.
Gene Type
protein_coding
Species
Monodelphis_domestica
Status
putative
Strand
Minus strand
Length
34620 bases
Position
chr8:26533721-26568340
Accession
NM_001172361
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMODP00000008836RRM_1PF00076.226.7e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMODT00000009010-2498-ENSMODP00000008836551 (aa)-F6SH96
Gene Model
Click here to download ENSMODG00000007123's gene model file
Pathways
Pathway IDPathway NameSource
mdo03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000007123's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMODG00000007123CPSF66552.284ENSMODG00000020364CPSF77256.250
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMODG00000007123CPSF67057.246ENSG00000149532CPSF79654.598Homo_sapiens
ENSMODG00000007123CPSF610099.274ENSG00000111605CPSF610099.274Homo_sapiens
ENSMODG00000007123CPSF610096.745ENSAMEG00000011781CPSF610096.745Ailuropoda_melanoleuca
ENSMODG00000007123CPSF65296.479ENSACAG00000004381CPSF65396.479Anolis_carolinensis
ENSMODG00000007123CPSF66450.249ENSANAG00000024635CPSF76950.276Aotus_nancymaae
ENSMODG00000007123CPSF69799.250ENSANAG00000019240CPSF69999.250Aotus_nancymaae
ENSMODG00000007123CPSF66291.018ENSAMXG00000016745CPSF67589.697Astyanax_mexicanus
ENSMODG00000007123CPSF66555.385ENSBTAG00000015263CPSF77155.429Bos_taurus
ENSMODG00000007123CPSF610099.274ENSBTAG00000007323CPSF610099.274Bos_taurus
ENSMODG00000007123CPSF67652.747ENSCJAG00000019282CPSF78454.857Callithrix_jacchus
ENSMODG00000007123CPSF610099.274ENSCJAG00000001798CPSF610099.274Callithrix_jacchus
ENSMODG00000007123CPSF69798.510ENSCAFG00000000424CPSF610096.998Canis_familiaris
ENSMODG00000007123CPSF66555.385ENSCAFG00000016152CPSF77156.000Canis_familiaris
ENSMODG00000007123CPSF66555.385ENSCAFG00020012753CPSF77156.000Canis_lupus_dingo
ENSMODG00000007123CPSF610099.274ENSCAFG00020016950CPSF610099.274Canis_lupus_dingo
ENSMODG00000007123CPSF610099.274ENSCHIG00000010792CPSF610099.274Capra_hircus
ENSMODG00000007123CPSF66555.385ENSCHIG00000014655CPSF77155.429Capra_hircus
ENSMODG00000007123CPSF66555.385ENSTSYG00000010138-7156.000Carlito_syrichta
ENSMODG00000007123CPSF69699.247ENSTSYG00000008591CPSF69699.247Carlito_syrichta
ENSMODG00000007123CPSF66155.385ENSCAPG00000006384CPSF77056.000Cavia_aperea
ENSMODG00000007123CPSF66555.385ENSCPOG00000009980CPSF77156.000Cavia_porcellus
ENSMODG00000007123CPSF610099.093ENSCPOG00000015201CPSF610099.093Cavia_porcellus
ENSMODG00000007123CPSF66554.872ENSCCAG00000032367CPSF77155.429Cebus_capucinus
ENSMODG00000007123CPSF610099.274ENSCCAG00000028149CPSF610099.274Cebus_capucinus
ENSMODG00000007123CPSF610099.274ENSCATG00000039288CPSF610099.274Cercocebus_atys
ENSMODG00000007123CPSF66854.872ENSCATG00000042801CPSF77755.429Cercocebus_atys
ENSMODG00000007123CPSF69798.872ENSCLAG00000010149CPSF610099.058Chinchilla_lanigera
ENSMODG00000007123CPSF66555.385ENSCLAG00000003174CPSF77155.429Chinchilla_lanigera
ENSMODG00000007123CPSF610093.027ENSCSAG00000004232CPSF610093.027Chlorocebus_sabaeus
ENSMODG00000007123CPSF66854.872ENSCSAG00000006414CPSF77755.429Chlorocebus_sabaeus
ENSMODG00000007123CPSF610098.185ENSCPBG00000013322CPSF610098.185Chrysemys_picta_bellii
ENSMODG00000007123CPSF65757.746ENSCSAVG00000000161-7052.023Ciona_savignyi
ENSMODG00000007123CPSF69699.247ENSCANG00000037294CPSF610099.247Colobus_angolensis_palliatus
ENSMODG00000007123CPSF66555.897ENSCGRG00001020382Cpsf77157.714Cricetulus_griseus_chok1gshd
ENSMODG00000007123CPSF610099.094ENSCGRG00001018082Cpsf610099.094Cricetulus_griseus_chok1gshd
ENSMODG00000007123CPSF69997.075ENSCGRG00000016909Cpsf610099.060Cricetulus_griseus_crigri
ENSMODG00000007123CPSF66854.378ENSCGRG00000017954Cpsf77757.714Cricetulus_griseus_crigri
ENSMODG00000007123CPSF65143.299ENSCSEG00000001956CPSF75746.154Cynoglossus_semilaevis
ENSMODG00000007123CPSF69481.262ENSCSEG00000008967cpsf69482.983Cynoglossus_semilaevis
ENSMODG00000007123CPSF69477.438ENSCVAG00000014857cpsf69479.541Cyprinodon_variegatus
ENSMODG00000007123CPSF67035.874ENSCVAG00000007392CPSF76644.521Cyprinodon_variegatus
ENSMODG00000007123CPSF65179.787ENSDARG00000018618cpsf65279.787Danio_rerio
ENSMODG00000007123CPSF67653.297ENSDNOG00000018517CPSF78455.429Dasypus_novemcinctus
ENSMODG00000007123CPSF610098.732ENSDNOG00000015292CPSF610098.732Dasypus_novemcinctus
ENSMODG00000007123CPSF69699.060ENSDORG00000002950Cpsf69899.060Dipodomys_ordii
ENSMODG00000007123CPSF610086.224ENSETEG00000002097CPSF610086.224Echinops_telfairi
ENSMODG00000007123CPSF66554.688ENSETEG00000003765CPSF77156.725Echinops_telfairi
ENSMODG00000007123CPSF66555.385ENSEASG00005008196CPSF77156.000Equus_asinus_asinus
ENSMODG00000007123CPSF610099.274ENSEASG00005008066CPSF610099.274Equus_asinus_asinus
ENSMODG00000007123CPSF67653.297ENSECAG00000018521CPSF79155.429Equus_caballus
ENSMODG00000007123CPSF610099.274ENSECAG00000015988CPSF610099.274Equus_caballus
ENSMODG00000007123CPSF69692.430ENSEEUG00000015039CPSF610092.430Erinaceus_europaeus
ENSMODG00000007123CPSF67653.297ENSFCAG00000013677CPSF79155.429Felis_catus
ENSMODG00000007123CPSF610099.093ENSFCAG00000002855CPSF610099.093Felis_catus
ENSMODG00000007123CPSF69798.311ENSFALG00000010157CPSF610098.311Ficedula_albicollis
ENSMODG00000007123CPSF66453.763ENSFALG00000011927CPSF77656.395Ficedula_albicollis
ENSMODG00000007123CPSF69541.436ENSFDAG00000003919CPSF77156.000Fukomys_damarensis
ENSMODG00000007123CPSF69996.539ENSFDAG00000002281CPSF69996.539Fukomys_damarensis
ENSMODG00000007123CPSF69474.229ENSFHEG00000019693cpsf69577.132Fundulus_heteroclitus
ENSMODG00000007123CPSF65393.333ENSGMOG00000012951cpsf65392.500Gadus_morhua
ENSMODG00000007123CPSF66555.959ENSGALG00000040962CPSF76356.647Gallus_gallus
ENSMODG00000007123CPSF610098.185ENSGAGG00000010228CPSF610098.185Gopherus_agassizii
ENSMODG00000007123CPSF610099.094ENSGGOG00000008211CPSF610099.094Gorilla_gorilla
ENSMODG00000007123CPSF610099.093ENSHGLG00000000792CPSF610099.093Heterocephalus_glaber_female
ENSMODG00000007123CPSF66855.897ENSHGLG00000019090-7756.000Heterocephalus_glaber_female
ENSMODG00000007123CPSF69996.364ENSHGLG00100013861CPSF610099.058Heterocephalus_glaber_male
ENSMODG00000007123CPSF68355.897ENSHGLG00100013933-7856.000Heterocephalus_glaber_male
ENSMODG00000007123CPSF66555.385ENSSTOG00000007708CPSF77156.000Ictidomys_tridecemlineatus
ENSMODG00000007123CPSF69699.247ENSSTOG00000014133CPSF610099.247Ictidomys_tridecemlineatus
ENSMODG00000007123CPSF69798.874ENSJJAG00000014647Cpsf69998.874Jaculus_jaculus
ENSMODG00000007123CPSF66855.385ENSJJAG00000019390Cpsf77756.000Jaculus_jaculus
ENSMODG00000007123CPSF68240.341ENSLBEG00000000947CPSF78533.010Labrus_bergylta
ENSMODG00000007123CPSF69493.090ENSLACG00000008625CPSF69493.282Latimeria_chalumnae
ENSMODG00000007123CPSF66344.937ENSLACG00000005542CPSF77044.937Latimeria_chalumnae
ENSMODG00000007123CPSF66692.941ENSLOCG00000016190cpsf66692.941Lepisosteus_oculatus
ENSMODG00000007123CPSF610099.274ENSLAFG00000030413CPSF610099.274Loxodonta_africana
ENSMODG00000007123CPSF66555.897ENSLAFG00000032084CPSF77156.571Loxodonta_africana
ENSMODG00000007123CPSF66554.872ENSMFAG00000001401CPSF77155.429Macaca_fascicularis
ENSMODG00000007123CPSF610099.274ENSMFAG00000045318CPSF610099.274Macaca_fascicularis
ENSMODG00000007123CPSF610099.094ENSMMUG00000002921CPSF610099.094Macaca_mulatta
ENSMODG00000007123CPSF66854.872ENSMMUG00000015280CPSF77755.429Macaca_mulatta
ENSMODG00000007123CPSF66854.872ENSMNEG00000029585CPSF77755.429Macaca_nemestrina
ENSMODG00000007123CPSF610099.274ENSMNEG00000036311CPSF610099.274Macaca_nemestrina
ENSMODG00000007123CPSF69699.247ENSMLEG00000003957CPSF610099.247Mandrillus_leucophaeus
ENSMODG00000007123CPSF66554.872ENSMLEG00000031269CPSF76955.429Mandrillus_leucophaeus
ENSMODG00000007123CPSF69993.211ENSMGAG00000010552CPSF69993.211Meleagris_gallopavo
ENSMODG00000007123CPSF610099.274ENSMAUG00000013240Cpsf610099.274Mesocricetus_auratus
ENSMODG00000007123CPSF66555.385ENSMAUG00000013020Cpsf77156.000Mesocricetus_auratus
ENSMODG00000007123CPSF66555.385ENSMICG00000013788CPSF77156.000Microcebus_murinus
ENSMODG00000007123CPSF610099.094ENSMICG00000007385-10099.094Microcebus_murinus
ENSMODG00000007123CPSF610099.094ENSMOCG00000013982Cpsf610099.094Microtus_ochrogaster
ENSMODG00000007123CPSF66555.385ENSMOCG00000000072Cpsf77156.000Microtus_ochrogaster
ENSMODG00000007123CPSF67490.674ENSMALG00000014908cpsf67892.090Monopterus_albus
ENSMODG00000007123CPSF610099.274MGP_CAROLIEiJ_G0015834Cpsf610099.274Mus_caroli
ENSMODG00000007123CPSF66555.385MGP_CAROLIEiJ_G0022690Cpsf77156.000Mus_caroli
ENSMODG00000007123CPSF610098.911ENSMUSG00000055531Cpsf610098.911Mus_musculus
ENSMODG00000007123CPSF66555.385ENSMUSG00000034820Cpsf77156.000Mus_musculus
ENSMODG00000007123CPSF68599.296MGP_PahariEiJ_G0031253Cpsf68799.321Mus_pahari
ENSMODG00000007123CPSF66555.385MGP_PahariEiJ_G0014184Cpsf77156.000Mus_pahari
ENSMODG00000007123CPSF610098.911MGP_SPRETEiJ_G0016657Cpsf610098.911Mus_spretus
ENSMODG00000007123CPSF66555.385MGP_SPRETEiJ_G0023604Cpsf77156.000Mus_spretus
ENSMODG00000007123CPSF610094.384ENSMPUG00000017502CPSF610094.384Mustela_putorius_furo
ENSMODG00000007123CPSF66154.359ENSMPUG00000014163CPSF76654.857Mustela_putorius_furo
ENSMODG00000007123CPSF69994.900ENSMLUG00000004172-10094.900Myotis_lucifugus
ENSMODG00000007123CPSF66855.385ENSMLUG00000013278CPSF77756.000Myotis_lucifugus
ENSMODG00000007123CPSF66894.203ENSMLUG00000028728-9294.444Myotis_lucifugus
ENSMODG00000007123CPSF66555.385ENSNGAG00000005031Cpsf77156.000Nannospalax_galili
ENSMODG00000007123CPSF610099.094ENSNGAG00000015901Cpsf610099.094Nannospalax_galili
ENSMODG00000007123CPSF66554.872ENSNLEG00000002529CPSF76555.429Nomascus_leucogenys
ENSMODG00000007123CPSF610099.274ENSNLEG00000003798CPSF610099.274Nomascus_leucogenys
ENSMODG00000007123CPSF610090.816ENSMEUG00000015041CPSF69984.843Notamacropus_eugenii
ENSMODG00000007123CPSF66552.792ENSMEUG00000002261CPSF77155.814Notamacropus_eugenii
ENSMODG00000007123CPSF69692.606ENSOPRG00000005199CPSF610092.606Ochotona_princeps
ENSMODG00000007123CPSF66553.030ENSODEG00000002610CPSF77155.618Octodon_degus
ENSMODG00000007123CPSF67198.477ENSODEG00000004418-7998.477Octodon_degus
ENSMODG00000007123CPSF610097.101ENSODEG00000018399-10097.101Octodon_degus
ENSMODG00000007123CPSF69180.716ENSOANG00000005944CPSF65087.594Ornithorhynchus_anatinus
ENSMODG00000007123CPSF69942.059ENSOCUG00000024726CPSF77155.429Oryctolagus_cuniculus
ENSMODG00000007123CPSF610093.027ENSOCUG00000013505CPSF610093.027Oryctolagus_cuniculus
ENSMODG00000007123CPSF67635.931ENSORLG00000006495CPSF76343.939Oryzias_latipes
ENSMODG00000007123CPSF69483.048ENSORLG00000013893cpsf69473.665Oryzias_latipes
ENSMODG00000007123CPSF69483.048ENSORLG00020016593cpsf69473.665Oryzias_latipes_hni
ENSMODG00000007123CPSF67536.087ENSORLG00020012657CPSF76641.667Oryzias_latipes_hni
ENSMODG00000007123CPSF69483.048ENSORLG00015015558cpsf69473.665Oryzias_latipes_hsok
ENSMODG00000007123CPSF67635.931ENSORLG00015011091CPSF76343.939Oryzias_latipes_hsok
ENSMODG00000007123CPSF67236.797ENSOMEG00000000539CPSF77537.267Oryzias_melastigma
ENSMODG00000007123CPSF66555.385ENSOGAG00000027958CPSF76656.000Otolemur_garnettii
ENSMODG00000007123CPSF69796.998ENSOGAG00000031988CPSF610096.998Otolemur_garnettii
ENSMODG00000007123CPSF66555.385ENSOARG00000012937CPSF76455.429Ovis_aries
ENSMODG00000007123CPSF69792.469ENSOARG00000020532CPSF610092.469Ovis_aries
ENSMODG00000007123CPSF66554.872ENSPPAG00000028232CPSF77055.429Pan_paniscus
ENSMODG00000007123CPSF610099.093ENSPPRG00000021620CPSF610099.093Panthera_pardus
ENSMODG00000007123CPSF66555.385ENSPPRG00000008538CPSF77156.000Panthera_pardus
ENSMODG00000007123CPSF69198.998ENSPTIG00000004079CPSF610098.998Panthera_tigris_altaica
ENSMODG00000007123CPSF66555.385ENSPTIG00000021699CPSF77156.000Panthera_tigris_altaica
ENSMODG00000007123CPSF66554.872ENSPTRG00000003742CPSF77155.429Pan_troglodytes
ENSMODG00000007123CPSF610099.094ENSPTRG00000005205CPSF610099.094Pan_troglodytes
ENSMODG00000007123CPSF66554.872ENSPANG00000006037CPSF76855.429Papio_anubis
ENSMODG00000007123CPSF610099.274ENSPANG00000011641CPSF610099.274Papio_anubis
ENSMODG00000007123CPSF66048.023ENSPKIG00000018054CPSF77247.826Paramormyrops_kingsleyae
ENSMODG00000007123CPSF69581.992ENSPKIG00000003081-9482.342Paramormyrops_kingsleyae
ENSMODG00000007123CPSF66855.385ENSPEMG00000012648Cpsf77756.000Peromyscus_maniculatus_bairdii
ENSMODG00000007123CPSF69698.872ENSPEMG00000007973Cpsf610098.872Peromyscus_maniculatus_bairdii
ENSMODG00000007123CPSF6100100.000ENSPCIG00000019063CPSF6100100.000Phascolarctos_cinereus
ENSMODG00000007123CPSF66552.284ENSPCIG00000002551CPSF78455.191Phascolarctos_cinereus
ENSMODG00000007123CPSF69479.159ENSPLAG00000005715cpsf69481.179Poecilia_latipinna
ENSMODG00000007123CPSF69479.159ENSPMEG00000001353cpsf69481.179Poecilia_mexicana
ENSMODG00000007123CPSF65278.125ENSPREG00000004417cpsf65278.521Poecilia_reticulata
ENSMODG00000007123CPSF610099.093ENSPPYG00000004756CPSF610099.093Pongo_abelii
ENSMODG00000007123CPSF66554.872ENSPPYG00000003188CPSF77155.429Pongo_abelii
ENSMODG00000007123CPSF610093.027ENSPCAG00000011574CPSF610093.027Procavia_capensis
ENSMODG00000007123CPSF610098.913ENSPCOG00000024384CPSF610098.913Propithecus_coquereli
ENSMODG00000007123CPSF66555.385ENSPCOG00000011976CPSF77156.000Propithecus_coquereli
ENSMODG00000007123CPSF66555.385ENSPVAG00000010675CPSF77156.000Pteropus_vampyrus
ENSMODG00000007123CPSF65447.799ENSPNAG00000015073CPSF76946.061Pygocentrus_nattereri
ENSMODG00000007123CPSF65179.930ENSPNAG00000024098CPSF65279.577Pygocentrus_nattereri
ENSMODG00000007123CPSF610099.093ENSRNOG00000005927Cpsf610099.093Rattus_norvegicus
ENSMODG00000007123CPSF68754.872ENSRNOG00000020668Cpsf77755.814Rattus_norvegicus
ENSMODG00000007123CPSF67652.747ENSRBIG00000031429CPSF79154.857Rhinopithecus_bieti
ENSMODG00000007123CPSF610098.913ENSRBIG00000042827CPSF610098.913Rhinopithecus_bieti
ENSMODG00000007123CPSF66554.872ENSRROG00000045009CPSF77155.429Rhinopithecus_roxellana
ENSMODG00000007123CPSF610099.093ENSRROG00000042758CPSF610099.093Rhinopithecus_roxellana
ENSMODG00000007123CPSF66554.872ENSSBOG00000018431CPSF77155.429Saimiri_boliviensis_boliviensis
ENSMODG00000007123CPSF69199.198ENSSBOG00000010652CPSF610099.198Saimiri_boliviensis_boliviensis
ENSMODG00000007123CPSF66254.822ENSSHAG00000011964CPSF76956.395Sarcophilus_harrisii
ENSMODG00000007123CPSF69796.276ENSSHAG00000006635CPSF69996.276Sarcophilus_harrisii
ENSMODG00000007123CPSF67042.157ENSSFOG00015010288cpsf77840.206Scleropages_formosus
ENSMODG00000007123CPSF69579.924ENSSFOG00015001688CPSF68282.375Scleropages_formosus
ENSMODG00000007123CPSF69583.588ENSSFOG00015015803CPSF69481.071Scleropages_formosus
ENSMODG00000007123CPSF69498.596ENSSARG00000006743CPSF68898.596Sorex_araneus
ENSMODG00000007123CPSF66556.250ENSSPUG00000019344CPSF77356.977Sphenodon_punctatus
ENSMODG00000007123CPSF67653.297ENSSSCG00000013083CPSF78455.429Sus_scrofa
ENSMODG00000007123CPSF610099.274ENSSSCG00000038031CPSF610099.274Sus_scrofa
ENSMODG00000007123CPSF66251.111ENSTGUG00000006513CPSF77156.322Taeniopygia_guttata
ENSMODG00000007123CPSF66154.872ENSTTRG00000011085CPSF77056.000Tursiops_truncatus
ENSMODG00000007123CPSF69199.198ENSUAMG00000023492CPSF610099.198Ursus_americanus
ENSMODG00000007123CPSF66555.385ENSUAMG00000017809CPSF77156.000Ursus_americanus
ENSMODG00000007123CPSF69199.198ENSUMAG00000020779CPSF610099.198Ursus_maritimus
ENSMODG00000007123CPSF66855.385ENSUMAG00000011825CPSF77756.000Ursus_maritimus
ENSMODG00000007123CPSF69692.782ENSVPAG00000008469CPSF610092.782Vicugna_pacos
ENSMODG00000007123CPSF67653.297ENSVVUG00000004939CPSF78455.429Vulpes_vulpes
ENSMODG00000007123CPSF69192.351ENSVVUG00000010156-10092.351Vulpes_vulpes
ENSMODG00000007123CPSF69741.651ENSXETG00000006715cpsf75445.198Xenopus_tropicalis
ENSMODG00000007123CPSF65278.125ENSXCOG00000013423cpsf65278.521Xiphophorus_couchianus

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