EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000007125 (Gene tree)
Gene ID: 100029539
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 2876 bases
Position: chr1:168714174-168717049
Accession: 587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000008838	Exo_endo_phos	PF03372.23	1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000009012	APEX1-201	1944	-	ENSMODP00000008838	320 (aa)	-	F6SH72

Gene Model

Click here to download ENSMODG00000007125's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000007125's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000007125	APEX1	100	83.438	ENSG00000100823	APEX1	100	83.438	Homo_sapiens
ENSMODG00000007125	APEX1	87	67.742	ENSAPOG00000017002	apex1	91	67.742	Acanthochromis_polyacanthus
ENSMODG00000007125	APEX1	100	84.688	ENSAMEG00000005418	APEX1	100	84.375	Ailuropoda_melanoleuca
ENSMODG00000007125	APEX1	86	70.545	ENSACIG00000010653	apex1	95	69.258	Amphilophus_citrinellus
ENSMODG00000007125	APEX1	87	67.742	ENSAOCG00000009649	apex1	90	67.742	Amphiprion_ocellaris
ENSMODG00000007125	APEX1	87	67.742	ENSAPEG00000021453	apex1	90	67.742	Amphiprion_percula
ENSMODG00000007125	APEX1	86	71.168	ENSATEG00000002883	apex1	87	70.504	Anabas_testudineus
ENSMODG00000007125	APEX1	100	68.438	ENSACAG00000008099	APEX1	100	68.438	Anolis_carolinensis
ENSMODG00000007125	APEX1	100	84.062	ENSANAG00000030117	APEX1	100	83.750	Aotus_nancymaae
ENSMODG00000007125	APEX1	86	69.455	ENSACLG00000018441	apex1	91	68.198	Astatotilapia_calliptera
ENSMODG00000007125	APEX1	100	64.688	ENSAMXG00000034699	apex1	90	68.198	Astyanax_mexicanus
ENSMODG00000007125	APEX1	100	84.688	ENSBTAG00000002745	APEX1	100	84.688	Bos_taurus
ENSMODG00000007125	APEX1	83	44.280	WBGene00001372	exo-3	93	44.280	Caenorhabditis_elegans
ENSMODG00000007125	APEX1	100	84.375	ENSCJAG00000009726	APEX1	100	84.062	Callithrix_jacchus
ENSMODG00000007125	APEX1	100	83.642	ENSCAFG00000032033	APEX1	100	84.062	Canis_familiaris
ENSMODG00000007125	APEX1	54	75.843	ENSCAFG00020023002	-	96	76.437	Canis_lupus_dingo
ENSMODG00000007125	APEX1	100	83.642	ENSCAFG00020014377	-	100	84.062	Canis_lupus_dingo
ENSMODG00000007125	APEX1	100	84.375	ENSCHIG00000007298	-	100	84.375	Capra_hircus
ENSMODG00000007125	APEX1	85	74.908	ENSCHIG00000014537	-	86	74.908	Capra_hircus
ENSMODG00000007125	APEX1	100	85.714	ENSTSYG00000034813	APEX1	100	83.750	Carlito_syrichta
ENSMODG00000007125	APEX1	84	82.288	ENSCAPG00000016235	APEX1	91	90.254	Cavia_aperea
ENSMODG00000007125	APEX1	100	85.404	ENSCPOG00000030909	APEX1	100	84.062	Cavia_porcellus
ENSMODG00000007125	APEX1	100	84.375	ENSCCAG00000033056	-	100	84.062	Cebus_capucinus
ENSMODG00000007125	APEX1	100	71.562	ENSCCAG00000031931	-	100	71.562	Cebus_capucinus
ENSMODG00000007125	APEX1	100	84.783	ENSCATG00000015580	APEX1	100	83.125	Cercocebus_atys
ENSMODG00000007125	APEX1	100	85.093	ENSCLAG00000001002	APEX1	100	83.438	Chinchilla_lanigera
ENSMODG00000007125	APEX1	100	84.472	ENSCSAG00000016685	-	100	82.812	Chlorocebus_sabaeus
ENSMODG00000007125	APEX1	100	84.472	ENSCSAG00000016670	-	100	82.812	Chlorocebus_sabaeus
ENSMODG00000007125	APEX1	100	70.497	ENSCPBG00000009567	APEX1	100	69.062	Chrysemys_picta_bellii
ENSMODG00000007125	APEX1	94	54.754	ENSCING00000008137	-	84	58.868	Ciona_intestinalis
ENSMODG00000007125	APEX1	97	48.544	ENSCSAVG00000007144	-	100	53.668	Ciona_savignyi
ENSMODG00000007125	APEX1	100	84.472	ENSCANG00000030726	APEX1	100	83.438	Colobus_angolensis_palliatus
ENSMODG00000007125	APEX1	100	83.230	ENSCGRG00001017046	Apex1	100	82.188	Cricetulus_griseus_chok1gshd
ENSMODG00000007125	APEX1	100	83.230	ENSCGRG00000008984	Apex1	100	82.188	Cricetulus_griseus_crigri
ENSMODG00000007125	APEX1	99	62.264	ENSCSEG00000017499	apex1	91	65.724	Cynoglossus_semilaevis
ENSMODG00000007125	APEX1	87	70.251	ENSCVAG00000022075	apex1	90	70.251	Cyprinodon_variegatus
ENSMODG00000007125	APEX1	100	64.688	ENSDARG00000045843	apex1	100	64.062	Danio_rerio
ENSMODG00000007125	APEX1	100	80.938	ENSDNOG00000042234	APEX1	95	80.312	Dasypus_novemcinctus
ENSMODG00000007125	APEX1	100	86.025	ENSDORG00000001616	Apex1	100	84.062	Dipodomys_ordii
ENSMODG00000007125	APEX1	100	84.688	ENSETEG00000004855	-	100	84.375	Echinops_telfairi
ENSMODG00000007125	APEX1	74	64.435	ENSEBUG00000000622	-	92	64.435	Eptatretus_burgeri
ENSMODG00000007125	APEX1	100	85.714	ENSEASG00005017489	APEX1	74	84.688	Equus_asinus_asinus
ENSMODG00000007125	APEX1	100	85.714	ENSECAG00000022325	APEX1	82	84.688	Equus_caballus
ENSMODG00000007125	APEX1	86	88.727	ENSEEUG00000012569	APEX1	94	88.971	Erinaceus_europaeus
ENSMODG00000007125	APEX1	100	62.813	ENSELUG00000021706	apex1	89	68.817	Esox_lucius
ENSMODG00000007125	APEX1	100	85.404	ENSFCAG00000030869	APEX1	100	83.750	Felis_catus
ENSMODG00000007125	APEX1	100	85.404	ENSFDAG00000006120	APEX1	100	83.750	Fukomys_damarensis
ENSMODG00000007125	APEX1	97	66.454	ENSFHEG00000009031	apex1	75	70.251	Fundulus_heteroclitus
ENSMODG00000007125	APEX1	99	61.635	ENSGMOG00000007943	apex1	88	65.818	Gadus_morhua
ENSMODG00000007125	APEX1	87	70.251	ENSGAFG00000005311	apex1	90	70.251	Gambusia_affinis
ENSMODG00000007125	APEX1	97	64.423	ENSGACG00000019497	apex1	99	68.421	Gasterosteus_aculeatus
ENSMODG00000007125	APEX1	100	68.438	ENSGAGG00000014999	APEX1	100	68.438	Gopherus_agassizii
ENSMODG00000007125	APEX1	100	84.062	ENSGGOG00000002128	APEX1	100	84.062	Gorilla_gorilla
ENSMODG00000007125	APEX1	86	69.455	ENSHBUG00000005894	apex1	91	68.198	Haplochromis_burtoni
ENSMODG00000007125	APEX1	100	86.335	ENSHGLG00000002848	APEX1	100	84.688	Heterocephalus_glaber_female
ENSMODG00000007125	APEX1	100	86.335	ENSHGLG00100017878	APEX1	100	84.688	Heterocephalus_glaber_male
ENSMODG00000007125	APEX1	99	64.263	ENSHCOG00000009961	apex1	89	68.817	Hippocampus_comes
ENSMODG00000007125	APEX1	100	66.875	ENSIPUG00000005799	apex1	91	69.965	Ictalurus_punctatus
ENSMODG00000007125	APEX1	100	84.062	ENSSTOG00000010096	APEX1	100	83.438	Ictidomys_tridecemlineatus
ENSMODG00000007125	APEX1	89	80.351	ENSJJAG00000020465	-	91	80.496	Jaculus_jaculus
ENSMODG00000007125	APEX1	100	84.161	ENSJJAG00000012067	-	100	82.812	Jaculus_jaculus
ENSMODG00000007125	APEX1	100	74.688	ENSJJAG00000003660	-	100	74.375	Jaculus_jaculus
ENSMODG00000007125	APEX1	87	69.892	ENSKMAG00000021171	apex1	91	69.258	Kryptolebias_marmoratus
ENSMODG00000007125	APEX1	87	67.384	ENSLBEG00000010248	apex1	91	66.784	Labrus_bergylta
ENSMODG00000007125	APEX1	100	67.188	ENSLACG00000008617	APEX1	100	66.250	Latimeria_chalumnae
ENSMODG00000007125	APEX1	100	66.250	ENSLOCG00000015516	apex1	88	71.685	Lepisosteus_oculatus
ENSMODG00000007125	APEX1	100	84.375	ENSLAFG00000021872	APEX1	100	84.062	Loxodonta_africana
ENSMODG00000007125	APEX1	100	84.783	ENSMFAG00000002565	APEX1	100	83.125	Macaca_fascicularis
ENSMODG00000007125	APEX1	100	84.783	ENSMMUG00000048039	APEX1	100	83.125	Macaca_mulatta
ENSMODG00000007125	APEX1	100	84.783	ENSMNEG00000036944	APEX1	100	83.125	Macaca_nemestrina
ENSMODG00000007125	APEX1	100	84.783	ENSMLEG00000042125	APEX1	100	83.125	Mandrillus_leucophaeus
ENSMODG00000007125	APEX1	99	64.151	ENSMAMG00000023526	apex1	90	69.892	Mastacembelus_armatus
ENSMODG00000007125	APEX1	86	69.455	ENSMZEG00005014187	apex1	91	68.198	Maylandia_zebra
ENSMODG00000007125	APEX1	100	82.866	ENSMAUG00000013994	Apex1	100	81.562	Mesocricetus_auratus
ENSMODG00000007125	APEX1	100	85.093	ENSMICG00000043554	APEX1	100	83.438	Microcebus_murinus
ENSMODG00000007125	APEX1	100	85.093	ENSMOCG00000013721	Apex1	100	84.688	Microtus_ochrogaster
ENSMODG00000007125	APEX1	87	67.143	ENSMMOG00000010031	apex1	87	67.143	Mola_mola
ENSMODG00000007125	APEX1	87	63.799	ENSMALG00000011699	apex1	75	63.799	Monopterus_albus
ENSMODG00000007125	APEX1	99	85.047	MGP_CAROLIEiJ_G0019209	Apex1	99	83.699	Mus_caroli
ENSMODG00000007125	APEX1	100	85.714	ENSMUSG00000035960	Apex1	100	84.375	Mus_musculus
ENSMODG00000007125	APEX1	100	85.312	MGP_PahariEiJ_G0030232	Apex1	100	85.000	Mus_pahari
ENSMODG00000007125	APEX1	100	85.714	MGP_SPRETEiJ_G0020101	Apex1	100	84.375	Mus_spretus
ENSMODG00000007125	APEX1	100	84.568	ENSMLUG00000028957	APEX1	100	82.812	Myotis_lucifugus
ENSMODG00000007125	APEX1	100	85.093	ENSNGAG00000002725	-	100	83.750	Nannospalax_galili
ENSMODG00000007125	APEX1	88	69.965	ENSNGAG00000021748	-	86	68.327	Nannospalax_galili
ENSMODG00000007125	APEX1	86	69.455	ENSNBRG00000005334	apex1	83	68.198	Neolamprologus_brichardi
ENSMODG00000007125	APEX1	100	83.540	ENSNLEG00000010839	APEX1	100	83.438	Nomascus_leucogenys
ENSMODG00000007125	APEX1	100	90.000	ENSMEUG00000014519	APEX1	100	86.250	Notamacropus_eugenii
ENSMODG00000007125	APEX1	100	85.358	ENSOPRG00000014029	APEX1	100	83.750	Ochotona_princeps
ENSMODG00000007125	APEX1	100	85.404	ENSODEG00000001703	-	100	83.750	Octodon_degus
ENSMODG00000007125	APEX1	97	67.412	ENSODEG00000004777	-	83	75.494	Octodon_degus
ENSMODG00000007125	APEX1	100	64.634	ENSODEG00000006583	-	100	63.497	Octodon_degus
ENSMODG00000007125	APEX1	87	69.424	ENSONIG00000012089	apex1	91	68.905	Oreochromis_niloticus
ENSMODG00000007125	APEX1	89	82.807	ENSOANG00000008836	APEX1	80	77.160	Ornithorhynchus_anatinus
ENSMODG00000007125	APEX1	100	85.000	ENSOCUG00000005022	APEX1	100	85.000	Oryctolagus_cuniculus
ENSMODG00000007125	APEX1	99	65.000	ENSORLG00000012378	apex1	89	70.609	Oryzias_latipes
ENSMODG00000007125	APEX1	99	65.000	ENSORLG00020021371	apex1	89	70.609	Oryzias_latipes_hni
ENSMODG00000007125	APEX1	99	65.000	ENSORLG00015020089	apex1	89	70.609	Oryzias_latipes_hsok
ENSMODG00000007125	APEX1	87	69.892	ENSOMEG00000018876	apex1	89	69.892	Oryzias_melastigma
ENSMODG00000007125	APEX1	100	86.957	ENSOGAG00000013335	-	100	85.000	Otolemur_garnettii
ENSMODG00000007125	APEX1	95	79.412	ENSOGAG00000029355	-	90	81.206	Otolemur_garnettii
ENSMODG00000007125	APEX1	97	81.290	ENSOARG00000001876	-	100	81.290	Ovis_aries
ENSMODG00000007125	APEX1	100	83.750	ENSOARG00000019740	-	100	83.750	Ovis_aries
ENSMODG00000007125	APEX1	99	73.899	ENSOARG00000014424	-	90	76.950	Ovis_aries
ENSMODG00000007125	APEX1	100	83.851	ENSPPAG00000038760	APEX1	100	83.750	Pan_paniscus
ENSMODG00000007125	APEX1	100	84.062	ENSPPRG00000011794	APEX1	100	83.750	Panthera_pardus
ENSMODG00000007125	APEX1	100	85.404	ENSPTIG00000014829	APEX1	100	83.750	Panthera_tigris_altaica
ENSMODG00000007125	APEX1	100	83.851	ENSPTRG00000006093	APEX1	100	83.750	Pan_troglodytes
ENSMODG00000007125	APEX1	100	84.783	ENSPANG00000022757	APEX1	100	83.125	Papio_anubis
ENSMODG00000007125	APEX1	86	69.091	ENSPKIG00000003504	apex1	89	68.459	Paramormyrops_kingsleyae
ENSMODG00000007125	APEX1	76	66.255	ENSPMGG00000016596	apex1	73	66.255	Periophthalmus_magnuspinnatus
ENSMODG00000007125	APEX1	100	85.093	ENSPEMG00000019097	Apex1	100	83.750	Peromyscus_maniculatus_bairdii
ENSMODG00000007125	APEX1	93	66.779	ENSPMAG00000007275	-	96	67.958	Petromyzon_marinus
ENSMODG00000007125	APEX1	100	89.375	ENSPCIG00000023274	APEX1	100	89.375	Phascolarctos_cinereus
ENSMODG00000007125	APEX1	87	70.609	ENSPFOG00000004178	apex1	90	70.609	Poecilia_formosa
ENSMODG00000007125	APEX1	87	70.251	ENSPLAG00000012779	apex1	90	70.251	Poecilia_latipinna
ENSMODG00000007125	APEX1	87	70.609	ENSPMEG00000019623	apex1	90	70.609	Poecilia_mexicana
ENSMODG00000007125	APEX1	87	69.892	ENSPREG00000014298	apex1	89	69.892	Poecilia_reticulata
ENSMODG00000007125	APEX1	100	83.125	ENSPPYG00000005565	APEX1	100	83.125	Pongo_abelii
ENSMODG00000007125	APEX1	100	83.540	ENSPCAG00000010376	APEX1	100	82.500	Procavia_capensis
ENSMODG00000007125	APEX1	100	85.093	ENSPCOG00000021564	APEX1	100	83.438	Propithecus_coquereli
ENSMODG00000007125	APEX1	100	84.568	ENSPVAG00000010736	APEX1	100	83.438	Pteropus_vampyrus
ENSMODG00000007125	APEX1	86	69.818	ENSPNYG00000023940	apex1	91	68.551	Pundamilia_nyererei
ENSMODG00000007125	APEX1	93	63.758	ENSPNAG00000020897	apex1	85	67.843	Pygocentrus_nattereri
ENSMODG00000007125	APEX1	100	84.472	ENSRNOG00000009663	Apex1	100	83.125	Rattus_norvegicus
ENSMODG00000007125	APEX1	100	85.093	ENSRBIG00000038325	APEX1	99	83.438	Rhinopithecus_bieti
ENSMODG00000007125	APEX1	100	74.062	ENSSBOG00000031372	-	92	79.078	Saimiri_boliviensis_boliviensis
ENSMODG00000007125	APEX1	100	84.375	ENSSBOG00000018921	-	100	84.062	Saimiri_boliviensis_boliviensis
ENSMODG00000007125	APEX1	100	92.593	ENSSHAG00000013524	APEX1	100	91.667	Sarcophilus_harrisii
ENSMODG00000007125	APEX1	86	67.273	ENSSFOG00015001948	apex1	90	66.667	Scleropages_formosus
ENSMODG00000007125	APEX1	86	69.091	ENSSMAG00000013348	apex1	88	68.459	Scophthalmus_maximus
ENSMODG00000007125	APEX1	99	63.522	ENSSDUG00000016377	apex1	89	68.459	Seriola_dumerili
ENSMODG00000007125	APEX1	99	63.836	ENSSLDG00000023005	apex1	91	68.198	Seriola_lalandi_dorsalis
ENSMODG00000007125	APEX1	91	71.575	ENSSPUG00000000531	APEX1	94	73.118	Sphenodon_punctatus
ENSMODG00000007125	APEX1	87	69.176	ENSSPAG00000000458	apex1	91	69.176	Stegastes_partitus
ENSMODG00000007125	APEX1	100	84.375	ENSSSCG00000040060	-	100	83.750	Sus_scrofa
ENSMODG00000007125	APEX1	92	52.824	ENSSSCG00000039705	-	92	54.577	Sus_scrofa
ENSMODG00000007125	APEX1	74	61.864	ENSTGUG00000014378	APEX1	100	61.864	Taeniopygia_guttata
ENSMODG00000007125	APEX1	86	67.636	ENSTRUG00000004268	apex1	84	67.025	Takifugu_rubripes
ENSMODG00000007125	APEX1	97	62.903	ENSTNIG00000005778	apex1	90	67.742	Tetraodon_nigroviridis
ENSMODG00000007125	APEX1	100	80.938	ENSTBEG00000006405	APEX1	100	80.625	Tupaia_belangeri
ENSMODG00000007125	APEX1	74	89.407	ENSTTRG00000007860	APEX1	100	89.407	Tursiops_truncatus
ENSMODG00000007125	APEX1	100	85.093	ENSUAMG00000010457	APEX1	100	84.062	Ursus_americanus
ENSMODG00000007125	APEX1	100	85.093	ENSUMAG00000009178	APEX1	100	84.062	Ursus_maritimus
ENSMODG00000007125	APEX1	74	84.322	ENSVPAG00000005083	APEX1	100	84.322	Vicugna_pacos
ENSMODG00000007125	APEX1	100	83.642	ENSVVUG00000009010	APEX1	100	84.062	Vulpes_vulpes
ENSMODG00000007125	APEX1	100	67.188	ENSXETG00000024773	apex1	89	69.258	Xenopus_tropicalis
ENSMODG00000007125	APEX1	87	70.251	ENSXCOG00000015233	apex1	89	70.251	Xiphophorus_couchianus
ENSMODG00000007125	APEX1	100	64.062	ENSXMAG00000006195	apex1	90	70.251	Xiphophorus_maculatus