EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000007139 (Gene tree)
Gene ID: 100024097
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 55246 bases
Position: chr2:78581815-78637060
Accession: 16792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000036241	EST1	PF10374.9	3.9e-25	1	1
ENSMODP00000036241	EST1_DNA_bind	PF10373.9	1.8e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000037830	SMG7-201	6465	-	ENSMODP00000036241	1056 (aa)	-	F6RX06

Gene Model

Click here to download ENSMODG00000007139's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000007139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000007139	SMG7	99	93.169	ENSG00000116698	SMG7	100	89.651	Homo_sapiens
ENSMODG00000007139	SMG7	83	74.848	ENSAPOG00000009611	smg7	86	74.848	Acanthochromis_polyacanthus
ENSMODG00000007139	SMG7	99	92.706	ENSAMEG00000002357	SMG7	91	92.610	Ailuropoda_melanoleuca
ENSMODG00000007139	SMG7	96	64.369	ENSACIG00000015152	smg7	91	64.734	Amphilophus_citrinellus
ENSMODG00000007139	SMG7	99	66.205	ENSAOCG00000013538	smg7	92	67.131	Amphiprion_ocellaris
ENSMODG00000007139	SMG7	99	66.359	ENSAPEG00000007851	smg7	92	66.851	Amphiprion_percula
ENSMODG00000007139	SMG7	99	65.353	ENSATEG00000006931	smg7	92	65.150	Anabas_testudineus
ENSMODG00000007139	SMG7	99	89.619	ENSAPLG00000015811	SMG7	92	89.704	Anas_platyrhynchos
ENSMODG00000007139	SMG7	99	83.409	ENSACAG00000014989	SMG7	92	83.953	Anolis_carolinensis
ENSMODG00000007139	SMG7	99	92.979	ENSANAG00000028114	SMG7	92	92.979	Aotus_nancymaae
ENSMODG00000007139	SMG7	99	64.103	ENSACLG00000022079	smg7	92	65.672	Astatotilapia_calliptera
ENSMODG00000007139	SMG7	99	68.053	ENSAMXG00000020809	smg7	92	67.989	Astyanax_mexicanus
ENSMODG00000007139	SMG7	99	91.935	ENSBTAG00000008003	SMG7	92	91.935	Bos_taurus
ENSMODG00000007139	SMG7	99	92.979	ENSCJAG00000005135	SMG7	92	92.979	Callithrix_jacchus
ENSMODG00000007139	SMG7	99	84.727	ENSCAFG00000013276	SMG7	90	84.636	Canis_familiaris
ENSMODG00000007139	SMG7	99	93.090	ENSCAFG00020015475	SMG7	92	92.994	Canis_lupus_dingo
ENSMODG00000007139	SMG7	99	84.890	ENSCHIG00000018192	SMG7	92	84.890	Capra_hircus
ENSMODG00000007139	SMG7	99	92.410	ENSTSYG00000002667	SMG7	92	92.410	Carlito_syrichta
ENSMODG00000007139	SMG7	99	84.455	ENSCPOG00000008906	SMG7	92	84.004	Cavia_porcellus
ENSMODG00000007139	SMG7	99	93.169	ENSCCAG00000028596	SMG7	92	93.169	Cebus_capucinus
ENSMODG00000007139	SMG7	99	93.169	ENSCATG00000011063	SMG7	92	93.169	Cercocebus_atys
ENSMODG00000007139	SMG7	99	91.841	ENSCLAG00000010751	SMG7	92	91.841	Chinchilla_lanigera
ENSMODG00000007139	SMG7	99	85.273	ENSCSAG00000012654	SMG7	90	85.273	Chlorocebus_sabaeus
ENSMODG00000007139	SMG7	94	81.879	ENSCHOG00000010522	SMG7	89	82.263	Choloepus_hoffmanni
ENSMODG00000007139	SMG7	99	92.073	ENSCPBG00000015724	SMG7	92	92.073	Chrysemys_picta_bellii
ENSMODG00000007139	SMG7	99	93.858	ENSCANG00000015680	SMG7	92	93.858	Colobus_angolensis_palliatus
ENSMODG00000007139	SMG7	99	91.461	ENSCGRG00001013705	Smg7	92	91.461	Cricetulus_griseus_chok1gshd
ENSMODG00000007139	SMG7	99	92.131	ENSCGRG00000018401	Smg7	92	92.131	Cricetulus_griseus_crigri
ENSMODG00000007139	SMG7	98	64.492	ENSCVAG00000011842	smg7	92	64.339	Cyprinodon_variegatus
ENSMODG00000007139	SMG7	99	66.884	ENSDARG00000060767	smg7	92	66.978	Danio_rerio
ENSMODG00000007139	SMG7	99	84.455	ENSDORG00000007331	Smg7	92	84.455	Dipodomys_ordii
ENSMODG00000007139	SMG7	99	84.511	ENSETEG00000002654	SMG7	95	84.511	Echinops_telfairi
ENSMODG00000007139	SMG7	99	85.364	ENSEASG00005006524	SMG7	92	85.326	Equus_asinus_asinus
ENSMODG00000007139	SMG7	95	97.015	ENSECAG00000004313	SMG7	89	96.736	Equus_caballus
ENSMODG00000007139	SMG7	98	85.213	ENSEEUG00000002024	SMG7	88	85.213	Erinaceus_europaeus
ENSMODG00000007139	SMG7	99	66.325	ENSELUG00000010293	smg7	94	66.822	Esox_lucius
ENSMODG00000007139	SMG7	99	89.048	ENSFCAG00000010900	SMG7	91	89.012	Felis_catus
ENSMODG00000007139	SMG7	98	82.185	ENSFALG00000003047	SMG7	92	82.185	Ficedula_albicollis
ENSMODG00000007139	SMG7	99	84.964	ENSFDAG00000012121	SMG7	92	84.964	Fukomys_damarensis
ENSMODG00000007139	SMG7	99	64.179	ENSFHEG00000011073	smg7	92	64.558	Fundulus_heteroclitus
ENSMODG00000007139	SMG7	73	74.857	ENSGMOG00000004916	smg7	71	74.857	Gadus_morhua
ENSMODG00000007139	SMG7	99	89.323	ENSGALG00000004667	SMG7	92	89.323	Gallus_gallus
ENSMODG00000007139	SMG7	99	64.585	ENSGAFG00000019000	smg7	92	64.492	Gambusia_affinis
ENSMODG00000007139	SMG7	99	62.709	ENSGACG00000001634	smg7	94	63.915	Gasterosteus_aculeatus
ENSMODG00000007139	SMG7	99	93.169	ENSGGOG00000002342	SMG7	92	93.169	Gorilla_gorilla
ENSMODG00000007139	SMG7	99	64.103	ENSHBUG00000003726	smg7	94	65.672	Haplochromis_burtoni
ENSMODG00000007139	SMG7	99	92.505	ENSHGLG00000009353	SMG7	92	92.505	Heterocephalus_glaber_female
ENSMODG00000007139	SMG7	99	77.536	ENSHGLG00100004878	-	92	77.536	Heterocephalus_glaber_male
ENSMODG00000007139	SMG7	99	92.410	ENSHGLG00100009637	-	92	92.410	Heterocephalus_glaber_male
ENSMODG00000007139	SMG7	99	68.135	ENSIPUG00000016997	smg7	92	68.416	Ictalurus_punctatus
ENSMODG00000007139	SMG7	99	89.753	ENSSTOG00000000401	SMG7	92	89.753	Ictidomys_tridecemlineatus
ENSMODG00000007139	SMG7	99	84.149	ENSJJAG00000012351	Smg7	92	84.149	Jaculus_jaculus
ENSMODG00000007139	SMG7	96	62.095	ENSKMAG00000004900	smg7	92	62.239	Kryptolebias_marmoratus
ENSMODG00000007139	SMG7	56	62.667	ENSLBEG00000005220	-	75	62.667	Labrus_bergylta
ENSMODG00000007139	SMG7	98	65.947	ENSLBEG00000002983	smg7	91	66.135	Labrus_bergylta
ENSMODG00000007139	SMG7	99	74.603	ENSLACG00000000972	SMG7	92	74.766	Latimeria_chalumnae
ENSMODG00000007139	SMG7	98	66.426	ENSLOCG00000002010	smg7	92	66.606	Lepisosteus_oculatus
ENSMODG00000007139	SMG7	99	85.806	ENSLAFG00000008186	SMG7	92	85.806	Loxodonta_africana
ENSMODG00000007139	SMG7	99	89.524	ENSMFAG00000031653	SMG7	84	98.701	Macaca_fascicularis
ENSMODG00000007139	SMG7	98	93.263	ENSMMUG00000018458	SMG7	91	93.263	Macaca_mulatta
ENSMODG00000007139	SMG7	99	93.169	ENSMNEG00000034798	SMG7	92	93.169	Macaca_nemestrina
ENSMODG00000007139	SMG7	99	93.169	ENSMLEG00000037170	SMG7	92	93.169	Mandrillus_leucophaeus
ENSMODG00000007139	SMG7	95	64.217	ENSMAMG00000018733	smg7	85	64.023	Mastacembelus_armatus
ENSMODG00000007139	SMG7	99	64.935	ENSMZEG00005015247	smg7	92	65.578	Maylandia_zebra
ENSMODG00000007139	SMG7	99	89.207	ENSMGAG00000001561	SMG7	92	89.207	Meleagris_gallopavo
ENSMODG00000007139	SMG7	99	91.556	ENSMAUG00000019484	Smg7	92	91.556	Mesocricetus_auratus
ENSMODG00000007139	SMG7	99	93.359	ENSMICG00000007145	SMG7	92	92.694	Microcebus_murinus
ENSMODG00000007139	SMG7	99	90.987	ENSMOCG00000020748	Smg7	92	90.987	Microtus_ochrogaster
ENSMODG00000007139	SMG7	98	64.850	ENSMMOG00000001524	smg7	91	65.316	Mola_mola
ENSMODG00000007139	SMG7	99	66.045	ENSMALG00000000061	smg7	86	65.659	Monopterus_albus
ENSMODG00000007139	SMG7	99	90.892	MGP_CAROLIEiJ_G0014704	Smg7	92	90.607	Mus_caroli
ENSMODG00000007139	SMG7	99	90.892	ENSMUSG00000042772	Smg7	92	90.892	Mus_musculus
ENSMODG00000007139	SMG7	99	91.082	MGP_PahariEiJ_G0027940	Smg7	92	91.082	Mus_pahari
ENSMODG00000007139	SMG7	99	90.987	MGP_SPRETEiJ_G0015511	Smg7	92	90.987	Mus_spretus
ENSMODG00000007139	SMG7	98	84.857	ENSMPUG00000011732	SMG7	90	84.765	Mustela_putorius_furo
ENSMODG00000007139	SMG7	99	85.440	ENSMLUG00000015417	SMG7	92	85.440	Myotis_lucifugus
ENSMODG00000007139	SMG7	99	92.030	ENSNGAG00000009836	Smg7	92	91.366	Nannospalax_galili
ENSMODG00000007139	SMG7	97	60.434	ENSNBRG00000024343	smg7	91	61.254	Neolamprologus_brichardi
ENSMODG00000007139	SMG7	99	93.264	ENSNLEG00000018018	SMG7	92	93.264	Nomascus_leucogenys
ENSMODG00000007139	SMG7	76	97.967	ENSMEUG00000004681	SMG7	73	97.967	Notamacropus_eugenii
ENSMODG00000007139	SMG7	99	76.282	ENSOPRG00000013942	SMG7	91	76.007	Ochotona_princeps
ENSMODG00000007139	SMG7	99	92.315	ENSODEG00000010390	SMG7	92	92.315	Octodon_degus
ENSMODG00000007139	SMG7	99	64.430	ENSONIG00000000277	smg7	91	65.581	Oreochromis_niloticus
ENSMODG00000007139	SMG7	98	83.702	ENSOANG00000000994	SMG7	92	84.162	Ornithorhynchus_anatinus
ENSMODG00000007139	SMG7	99	80.861	ENSOCUG00000005887	SMG7	85	80.861	Oryctolagus_cuniculus
ENSMODG00000007139	SMG7	99	64.252	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSMODG00000007139	SMG7	99	64.628	ENSORLG00020015779	smg7	70	92.763	Oryzias_latipes_hni
ENSMODG00000007139	SMG7	99	64.292	ENSORLG00015012289	smg7	91	64.011	Oryzias_latipes_hsok
ENSMODG00000007139	SMG7	99	61.448	ENSOMEG00000002328	smg7	92	61.538	Oryzias_melastigma
ENSMODG00000007139	SMG7	99	84.594	ENSOGAG00000003107	SMG7	89	84.503	Otolemur_garnettii
ENSMODG00000007139	SMG7	98	88.878	ENSOARG00000001352	SMG7	92	88.878	Ovis_aries
ENSMODG00000007139	SMG7	99	93.359	ENSPPAG00000031619	SMG7	92	93.359	Pan_paniscus
ENSMODG00000007139	SMG7	99	92.884	ENSPPRG00000011222	SMG7	92	92.789	Panthera_pardus
ENSMODG00000007139	SMG7	96	88.962	ENSPTIG00000007242	SMG7	93	88.868	Panthera_tigris_altaica
ENSMODG00000007139	SMG7	99	93.359	ENSPTRG00000001764	SMG7	92	93.359	Pan_troglodytes
ENSMODG00000007139	SMG7	99	93.169	ENSPANG00000004520	SMG7	92	93.169	Papio_anubis
ENSMODG00000007139	SMG7	98	64.824	ENSPKIG00000007242	smg7	93	63.743	Paramormyrops_kingsleyae
ENSMODG00000007139	SMG7	98	90.716	ENSPSIG00000012201	SMG7	92	90.619	Pelodiscus_sinensis
ENSMODG00000007139	SMG7	68	43.391	ENSPMGG00000021833	smg7	86	43.600	Periophthalmus_magnuspinnatus
ENSMODG00000007139	SMG7	99	88.964	ENSPEMG00000011315	Smg7	92	88.964	Peromyscus_maniculatus_bairdii
ENSMODG00000007139	SMG7	99	97.531	ENSPCIG00000003786	SMG7	92	97.531	Phascolarctos_cinereus
ENSMODG00000007139	SMG7	99	61.752	ENSPFOG00000019219	smg7	92	61.483	Poecilia_formosa
ENSMODG00000007139	SMG7	99	64.804	ENSPLAG00000001446	smg7	92	64.432	Poecilia_latipinna
ENSMODG00000007139	SMG7	99	64.930	ENSPMEG00000005218	smg7	94	64.525	Poecilia_mexicana
ENSMODG00000007139	SMG7	94	61.176	ENSPREG00000019039	smg7	91	61.471	Poecilia_reticulata
ENSMODG00000007139	SMG7	99	93.264	ENSPPYG00000000427	SMG7	92	93.264	Pongo_abelii
ENSMODG00000007139	SMG7	98	75.046	ENSPCAG00000008360	SMG7	90	75.046	Procavia_capensis
ENSMODG00000007139	SMG7	99	89.564	ENSPCOG00000011996	SMG7	92	88.899	Propithecus_coquereli
ENSMODG00000007139	SMG7	98	78.986	ENSPVAG00000000851	SMG7	89	80.461	Pteropus_vampyrus
ENSMODG00000007139	SMG7	99	64.279	ENSPNYG00000007643	smg7	92	65.856	Pundamilia_nyererei
ENSMODG00000007139	SMG7	99	67.540	ENSPNAG00000011374	smg7	92	67.636	Pygocentrus_nattereri
ENSMODG00000007139	SMG7	99	90.806	ENSRNOG00000027962	Smg7	100	88.404	Rattus_norvegicus
ENSMODG00000007139	SMG7	99	93.169	ENSRBIG00000036316	SMG7	92	93.169	Rhinopithecus_bieti
ENSMODG00000007139	SMG7	99	93.169	ENSRROG00000035719	SMG7	92	93.169	Rhinopithecus_roxellana
ENSMODG00000007139	SMG7	99	89.184	ENSSBOG00000023454	SMG7	86	96.226	Saimiri_boliviensis_boliviensis
ENSMODG00000007139	SMG7	99	97.818	ENSSHAG00000013147	SMG7	92	97.701	Sarcophilus_harrisii
ENSMODG00000007139	SMG7	99	67.420	ENSSFOG00015017252	smg7	92	67.700	Scleropages_formosus
ENSMODG00000007139	SMG7	99	65.456	ENSSMAG00000006067	smg7	92	65.150	Scophthalmus_maximus
ENSMODG00000007139	SMG7	68	73.379	ENSSDUG00000017543	smg7	92	66.667	Seriola_dumerili
ENSMODG00000007139	SMG7	99	89.856	ENSSPUG00000002064	SMG7	92	89.856	Sphenodon_punctatus
ENSMODG00000007139	SMG7	97	67.337	ENSSPAG00000008733	smg7	90	67.049	Stegastes_partitus
ENSMODG00000007139	SMG7	99	89.238	ENSSSCG00000015558	SMG7	92	89.184	Sus_scrofa
ENSMODG00000007139	SMG7	98	90.153	ENSTGUG00000003928	SMG7	92	90.153	Taeniopygia_guttata
ENSMODG00000007139	SMG7	99	58.275	ENSTNIG00000002802	smg7	93	58.158	Tetraodon_nigroviridis
ENSMODG00000007139	SMG7	80	84.906	ENSTBEG00000003220	SMG7	68	84.906	Tupaia_belangeri
ENSMODG00000007139	SMG7	99	85.256	ENSTTRG00000014778	SMG7	89	85.256	Tursiops_truncatus
ENSMODG00000007139	SMG7	96	88.911	ENSUAMG00000017473	SMG7	92	88.812	Ursus_americanus
ENSMODG00000007139	SMG7	96	88.911	ENSUMAG00000016389	SMG7	92	88.812	Ursus_maritimus
ENSMODG00000007139	SMG7	99	88.615	ENSVVUG00000008976	SMG7	92	88.520	Vulpes_vulpes
ENSMODG00000007139	SMG7	99	71.686	ENSXETG00000012528	smg7	91	71.780	Xenopus_tropicalis
ENSMODG00000007139	SMG7	99	64.646	ENSXMAG00000007123	smg7	92	64.646	Xiphophorus_maculatus