EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000007420 (Gene tree)
Gene ID: 100032453
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 28273 bases
Position: chr2:442196794-442225066
Accession: 100032453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000009208	CAF1	PF04857.20	6.3e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000009389	PNLDC1-201	4936	-	ENSMODP00000009208	533 (aa)	XP_007484914	F7EE59

Gene Model

Click here to download ENSMODG00000007420's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000007420's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000007420	PNLDC1	99	75.614	ENSG00000146453	PNLDC1	99	75.614	Homo_sapiens
ENSMODG00000007420	PNLDC1	99	76.471	ENSAMEG00000015371	PNLDC1	99	76.471	Ailuropoda_melanoleuca
ENSMODG00000007420	PNLDC1	95	61.252	ENSAPLG00000007014	PNLDC1	97	61.252	Anas_platyrhynchos
ENSMODG00000007420	PNLDC1	99	60.714	ENSACAG00000013667	PNLDC1	100	60.714	Anolis_carolinensis
ENSMODG00000007420	PNLDC1	99	74.291	ENSANAG00000034713	PNLDC1	100	74.560	Aotus_nancymaae
ENSMODG00000007420	PNLDC1	94	77.778	ENSBTAG00000015166	PNLDC1	95	77.778	Bos_taurus
ENSMODG00000007420	PNLDC1	99	74.102	ENSCJAG00000011865	PNLDC1	99	75.149	Callithrix_jacchus
ENSMODG00000007420	PNLDC1	97	77.264	ENSCAFG00000000740	PNLDC1	99	77.040	Canis_familiaris
ENSMODG00000007420	PNLDC1	97	75.483	ENSCAFG00020017742	PNLDC1	99	75.285	Canis_lupus_dingo
ENSMODG00000007420	PNLDC1	99	75.330	ENSCHIG00000003141	PNLDC1	99	75.330	Capra_hircus
ENSMODG00000007420	PNLDC1	99	73.496	ENSTSYG00000005606	PNLDC1	99	73.496	Carlito_syrichta
ENSMODG00000007420	PNLDC1	99	53.832	ENSCAPG00000011893	PNLDC1	99	53.832	Cavia_aperea
ENSMODG00000007420	PNLDC1	99	69.434	ENSCPOG00000019565	PNLDC1	99	69.434	Cavia_porcellus
ENSMODG00000007420	PNLDC1	99	73.872	ENSCCAG00000026232	PNLDC1	99	73.872	Cebus_capucinus
ENSMODG00000007420	PNLDC1	99	74.858	ENSCATG00000033196	PNLDC1	99	74.858	Cercocebus_atys
ENSMODG00000007420	PNLDC1	99	74.291	ENSCLAG00000003228	PNLDC1	99	74.291	Chinchilla_lanigera
ENSMODG00000007420	PNLDC1	94	75.099	ENSCSAG00000012478	PNLDC1	97	75.099	Chlorocebus_sabaeus
ENSMODG00000007420	PNLDC1	96	70.898	ENSCPBG00000004050	PNLDC1	100	70.898	Chrysemys_picta_bellii
ENSMODG00000007420	PNLDC1	94	75.794	ENSCANG00000043076	PNLDC1	97	75.794	Colobus_angolensis_palliatus
ENSMODG00000007420	PNLDC1	99	72.212	ENSCGRG00001007470	-	99	72.212	Cricetulus_griseus_chok1gshd
ENSMODG00000007420	PNLDC1	100	57.223	ENSCGRG00001011981	-	100	57.223	Cricetulus_griseus_chok1gshd
ENSMODG00000007420	PNLDC1	100	59.475	ENSCGRG00000003103	-	100	59.475	Cricetulus_griseus_crigri
ENSMODG00000007420	PNLDC1	99	72.212	ENSCGRG00000010221	-	99	72.212	Cricetulus_griseus_crigri
ENSMODG00000007420	PNLDC1	99	75.614	ENSDNOG00000013709	PNLDC1	99	75.614	Dasypus_novemcinctus
ENSMODG00000007420	PNLDC1	99	69.850	ENSDORG00000011517	Pnldc1	99	74.760	Dipodomys_ordii
ENSMODG00000007420	PNLDC1	91	69.278	ENSETEG00000007587	PNLDC1	98	69.278	Echinops_telfairi
ENSMODG00000007420	PNLDC1	97	30.943	ENSEBUG00000008118	PNLDC1	97	30.943	Eptatretus_burgeri
ENSMODG00000007420	PNLDC1	99	70.169	ENSEASG00005019029	PNLDC1	99	70.169	Equus_asinus_asinus
ENSMODG00000007420	PNLDC1	99	77.230	ENSECAG00000012898	PNLDC1	99	77.230	Equus_caballus
ENSMODG00000007420	PNLDC1	67	65.625	ENSEEUG00000005717	-	86	65.625	Erinaceus_europaeus
ENSMODG00000007420	PNLDC1	99	76.850	ENSFCAG00000002848	PNLDC1	99	76.850	Felis_catus
ENSMODG00000007420	PNLDC1	94	61.144	ENSFALG00000012081	PNLDC1	99	61.144	Ficedula_albicollis
ENSMODG00000007420	PNLDC1	99	73.724	ENSFDAG00000021334	PNLDC1	99	73.724	Fukomys_damarensis
ENSMODG00000007420	PNLDC1	78	60.808	ENSGALG00000011624	PNLDC1	82	60.808	Gallus_gallus
ENSMODG00000007420	PNLDC1	99	70.810	ENSGAGG00000015276	PNLDC1	100	71.901	Gopherus_agassizii
ENSMODG00000007420	PNLDC1	99	74.812	ENSGGOG00000014077	PNLDC1	99	74.812	Gorilla_gorilla
ENSMODG00000007420	PNLDC1	99	74.669	ENSHGLG00000006889	PNLDC1	99	74.669	Heterocephalus_glaber_female
ENSMODG00000007420	PNLDC1	99	74.669	ENSHGLG00100018275	PNLDC1	99	74.669	Heterocephalus_glaber_male
ENSMODG00000007420	PNLDC1	99	76.460	ENSSTOG00000005595	PNLDC1	100	76.460	Ictidomys_tridecemlineatus
ENSMODG00000007420	PNLDC1	99	69.057	ENSJJAG00000009937	Pnldc1	100	69.057	Jaculus_jaculus
ENSMODG00000007420	PNLDC1	59	73.968	ENSLAFG00000030189	PNLDC1	92	73.968	Loxodonta_africana
ENSMODG00000007420	PNLDC1	99	75.047	ENSMFAG00000041296	PNLDC1	99	75.047	Macaca_fascicularis
ENSMODG00000007420	PNLDC1	99	75.047	ENSMMUG00000004181	PNLDC1	99	75.047	Macaca_mulatta
ENSMODG00000007420	PNLDC1	99	75.047	ENSMNEG00000034271	PNLDC1	99	75.047	Macaca_nemestrina
ENSMODG00000007420	PNLDC1	99	72.023	ENSMLEG00000044059	PNLDC1	99	72.023	Mandrillus_leucophaeus
ENSMODG00000007420	PNLDC1	95	61.417	ENSMGAG00000012470	PNLDC1	97	61.417	Meleagris_gallopavo
ENSMODG00000007420	PNLDC1	99	60.000	ENSMAUG00000012298	Pnldc1	99	60.000	Mesocricetus_auratus
ENSMODG00000007420	PNLDC1	99	76.560	ENSMICG00000008021	PNLDC1	99	76.560	Microcebus_murinus
ENSMODG00000007420	PNLDC1	99	74.953	ENSMOCG00000014287	Pnldc1	99	74.953	Microtus_ochrogaster
ENSMODG00000007420	PNLDC1	99	75.901	MGP_CAROLIEiJ_G0021045	Pnldc1	99	75.901	Mus_caroli
ENSMODG00000007420	PNLDC1	99	76.091	ENSMUSG00000073460	Pnldc1	100	75.238	Mus_musculus
ENSMODG00000007420	PNLDC1	99	75.425	MGP_PahariEiJ_G0023361	Pnldc1	99	75.425	Mus_pahari
ENSMODG00000007420	PNLDC1	99	75.712	MGP_SPRETEiJ_G0021975	Pnldc1	99	75.712	Mus_spretus
ENSMODG00000007420	PNLDC1	99	76.880	ENSMPUG00000004920	PNLDC1	100	76.880	Mustela_putorius_furo
ENSMODG00000007420	PNLDC1	99	76.281	ENSMLUG00000000747	PNLDC1	99	76.281	Myotis_lucifugus
ENSMODG00000007420	PNLDC1	99	75.992	ENSNGAG00000017714	Pnldc1	99	75.992	Nannospalax_galili
ENSMODG00000007420	PNLDC1	94	75.542	ENSNLEG00000011282	PNLDC1	97	75.542	Nomascus_leucogenys
ENSMODG00000007420	PNLDC1	54	81.944	ENSMEUG00000014042	-	100	81.944	Notamacropus_eugenii
ENSMODG00000007420	PNLDC1	72	78.370	ENSMEUG00000011926	-	73	78.370	Notamacropus_eugenii
ENSMODG00000007420	PNLDC1	79	74.271	ENSOPRG00000003813	PNLDC1	79	74.271	Ochotona_princeps
ENSMODG00000007420	PNLDC1	99	73.724	ENSODEG00000008047	PNLDC1	99	73.724	Octodon_degus
ENSMODG00000007420	PNLDC1	94	62.103	ENSOANG00000012199	PNLDC1	99	61.582	Ornithorhynchus_anatinus
ENSMODG00000007420	PNLDC1	99	75.142	ENSOCUG00000013867	PNLDC1	99	75.142	Oryctolagus_cuniculus
ENSMODG00000007420	PNLDC1	99	76.749	ENSOGAG00000007331	PNLDC1	100	76.749	Otolemur_garnettii
ENSMODG00000007420	PNLDC1	99	75.803	ENSOARG00000004585	PNLDC1	99	75.803	Ovis_aries
ENSMODG00000007420	PNLDC1	99	74.624	ENSPPAG00000026651	PNLDC1	99	74.624	Pan_paniscus
ENSMODG00000007420	PNLDC1	99	77.040	ENSPPRG00000012854	PNLDC1	99	77.040	Panthera_pardus
ENSMODG00000007420	PNLDC1	98	72.849	ENSPTIG00000011501	PNLDC1	98	72.849	Panthera_tigris_altaica
ENSMODG00000007420	PNLDC1	99	74.624	ENSPTRG00000018762	PNLDC1	99	74.624	Pan_troglodytes
ENSMODG00000007420	PNLDC1	99	74.858	ENSPANG00000022009	PNLDC1	99	74.858	Papio_anubis
ENSMODG00000007420	PNLDC1	99	75.712	ENSPEMG00000016301	Pnldc1	99	75.712	Peromyscus_maniculatus_bairdii
ENSMODG00000007420	PNLDC1	82	97.260	ENSPCIG00000023412	PNLDC1	100	97.260	Phascolarctos_cinereus
ENSMODG00000007420	PNLDC1	99	68.529	ENSPPYG00000017148	PNLDC1	99	68.529	Pongo_abelii
ENSMODG00000007420	PNLDC1	99	66.983	ENSPCAG00000014169	PNLDC1	99	66.983	Procavia_capensis
ENSMODG00000007420	PNLDC1	99	76.938	ENSPCOG00000025722	PNLDC1	99	76.938	Propithecus_coquereli
ENSMODG00000007420	PNLDC1	72	80.418	ENSPVAG00000005325	PNLDC1	72	80.418	Pteropus_vampyrus
ENSMODG00000007420	PNLDC1	99	76.236	ENSRNOG00000023140	Pnldc1	99	76.236	Rattus_norvegicus
ENSMODG00000007420	PNLDC1	99	75.142	ENSRBIG00000033806	PNLDC1	99	75.142	Rhinopithecus_bieti
ENSMODG00000007420	PNLDC1	94	76.190	ENSRROG00000043919	PNLDC1	97	76.190	Rhinopithecus_roxellana
ENSMODG00000007420	PNLDC1	99	74.858	ENSSBOG00000019135	PNLDC1	99	74.858	Saimiri_boliviensis_boliviensis
ENSMODG00000007420	PNLDC1	95	96.457	ENSSHAG00000015192	PNLDC1	98	96.457	Sarcophilus_harrisii
ENSMODG00000007420	PNLDC1	53	70.280	ENSSPUG00000004627	PNLDC1	100	69.469	Sphenodon_punctatus
ENSMODG00000007420	PNLDC1	94	75.896	ENSSSCG00000004046	PNLDC1	98	75.896	Sus_scrofa
ENSMODG00000007420	PNLDC1	91	62.168	ENSTGUG00000011418	PNLDC1	100	62.168	Taeniopygia_guttata
ENSMODG00000007420	PNLDC1	94	66.468	ENSTBEG00000009131	PNLDC1	97	66.468	Tupaia_belangeri
ENSMODG00000007420	PNLDC1	72	73.834	ENSTTRG00000010409	PNLDC1	73	73.834	Tursiops_truncatus
ENSMODG00000007420	PNLDC1	97	66.034	ENSUAMG00000015783	PNLDC1	99	65.981	Ursus_americanus
ENSMODG00000007420	PNLDC1	92	71.657	ENSUMAG00000011903	PNLDC1	99	71.513	Ursus_maritimus
ENSMODG00000007420	PNLDC1	96	77.299	ENSVVUG00000006586	PNLDC1	98	78.468	Vulpes_vulpes