EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000007438 (Gene tree)
Gene ID: 100027330
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 15172 bases
Position: chr2:213588941-213604112
Accession: 100027330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000009230	tRNA_int_end_N2	PF12928.7	2.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000009411	TSEN54-201	2826	-	ENSMODP00000009230	549 (aa)	XP_001377652	F7DWA7

Gene Model

Click here to download ENSMODG00000007438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000007438's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000007438	TSEN54	98	68.587	ENSG00000182173	TSEN54	100	84.722	Homo_sapiens
ENSMODG00000007438	TSEN54	95	44.717	ENSAPOG00000009659	tsen54	99	42.697	Acanthochromis_polyacanthus
ENSMODG00000007438	TSEN54	97	68.352	ENSAMEG00000009414	TSEN54	98	68.293	Ailuropoda_melanoleuca
ENSMODG00000007438	TSEN54	95	44.847	ENSAOCG00000000152	tsen54	95	44.847	Amphiprion_ocellaris
ENSMODG00000007438	TSEN54	95	44.656	ENSAPEG00000018931	tsen54	94	44.656	Amphiprion_percula
ENSMODG00000007438	TSEN54	95	44.381	ENSATEG00000019860	tsen54	97	44.297	Anabas_testudineus
ENSMODG00000007438	TSEN54	85	53.205	ENSAPLG00000009419	TSEN54	100	53.205	Anas_platyrhynchos
ENSMODG00000007438	TSEN54	98	51.673	ENSACAG00000006714	TSEN54	98	52.841	Anolis_carolinensis
ENSMODG00000007438	TSEN54	97	68.550	ENSANAG00000024061	TSEN54	98	68.491	Aotus_nancymaae
ENSMODG00000007438	TSEN54	95	43.879	ENSACLG00000019800	tsen54	96	43.985	Astatotilapia_calliptera
ENSMODG00000007438	TSEN54	95	45.594	ENSAMXG00000006546	tsen54	96	45.594	Astyanax_mexicanus
ENSMODG00000007438	TSEN54	98	69.145	ENSBTAG00000000824	TSEN54	98	69.623	Bos_taurus
ENSMODG00000007438	TSEN54	97	67.797	ENSCJAG00000014278	TSEN54	98	67.925	Callithrix_jacchus
ENSMODG00000007438	TSEN54	98	69.703	ENSCAFG00000004798	TSEN54	98	69.434	Canis_familiaris
ENSMODG00000007438	TSEN54	98	69.703	ENSCAFG00020000312	TSEN54	98	69.434	Canis_lupus_dingo
ENSMODG00000007438	TSEN54	98	67.468	ENSCHIG00000019908	TSEN54	98	67.917	Capra_hircus
ENSMODG00000007438	TSEN54	85	66.809	ENSTSYG00000037439	TSEN54	100	66.809	Carlito_syrichta
ENSMODG00000007438	TSEN54	97	67.797	ENSCCAG00000036624	TSEN54	98	67.736	Cebus_capucinus
ENSMODG00000007438	TSEN54	96	67.619	ENSCATG00000042877	TSEN54	98	67.481	Cercocebus_atys
ENSMODG00000007438	TSEN54	96	66.667	ENSCLAG00000002924	TSEN54	98	66.604	Chinchilla_lanigera
ENSMODG00000007438	TSEN54	98	67.472	ENSCSAG00000004809	TSEN54	98	67.293	Chlorocebus_sabaeus
ENSMODG00000007438	TSEN54	98	56.215	ENSCPBG00000028071	TSEN54	98	56.357	Chrysemys_picta_bellii
ENSMODG00000007438	TSEN54	98	66.914	ENSCANG00000028053	TSEN54	98	66.729	Colobus_angolensis_palliatus
ENSMODG00000007438	TSEN54	98	65.677	ENSCGRG00001020029	Tsen54	98	65.725	Cricetulus_griseus_chok1gshd
ENSMODG00000007438	TSEN54	83	63.895	ENSCGRG00000016289	Tsen54	100	63.895	Cricetulus_griseus_crigri
ENSMODG00000007438	TSEN54	79	36.674	ENSCSEG00000020586	tsen54	99	36.674	Cynoglossus_semilaevis
ENSMODG00000007438	TSEN54	79	42.661	ENSDARG00000036844	tsen54	99	42.661	Danio_rerio
ENSMODG00000007438	TSEN54	98	67.658	ENSDNOG00000018452	TSEN54	98	67.547	Dasypus_novemcinctus
ENSMODG00000007438	TSEN54	98	66.914	ENSDORG00000004073	Tsen54	98	67.170	Dipodomys_ordii
ENSMODG00000007438	TSEN54	95	34.879	ENSEBUG00000005203	TSEN54	95	34.879	Eptatretus_burgeri
ENSMODG00000007438	TSEN54	98	70.818	ENSEASG00005000579	TSEN54	98	70.943	Equus_asinus_asinus
ENSMODG00000007438	TSEN54	98	71.004	ENSECAG00000004924	TSEN54	98	71.132	Equus_caballus
ENSMODG00000007438	TSEN54	85	66.667	ENSEEUG00000008467	TSEN54	100	66.667	Erinaceus_europaeus
ENSMODG00000007438	TSEN54	95	45.113	ENSELUG00000017703	tsen54	90	45.113	Esox_lucius
ENSMODG00000007438	TSEN54	98	69.963	ENSFCAG00000023712	TSEN54	99	70.189	Felis_catus
ENSMODG00000007438	TSEN54	94	51.154	ENSFALG00000001119	TSEN54	95	52.115	Ficedula_albicollis
ENSMODG00000007438	TSEN54	85	66.167	ENSFDAG00000019090	TSEN54	99	66.167	Fukomys_damarensis
ENSMODG00000007438	TSEN54	95	44.914	ENSFHEG00000005470	tsen54	96	45.298	Fundulus_heteroclitus
ENSMODG00000007438	TSEN54	79	44.262	ENSGMOG00000013146	tsen54	99	44.262	Gadus_morhua
ENSMODG00000007438	TSEN54	93	49.807	ENSGALG00000047163	TSEN54	98	49.807	Gallus_gallus
ENSMODG00000007438	TSEN54	95	45.594	ENSGAFG00000005111	tsen54	96	45.594	Gambusia_affinis
ENSMODG00000007438	TSEN54	95	43.208	ENSGACG00000014987	tsen54	99	43.396	Gasterosteus_aculeatus
ENSMODG00000007438	TSEN54	98	55.433	ENSGAGG00000006825	TSEN54	97	55.577	Gopherus_agassizii
ENSMODG00000007438	TSEN54	95	68.138	ENSGGOG00000009417	TSEN54	100	67.878	Gorilla_gorilla
ENSMODG00000007438	TSEN54	86	42.531	ENSHBUG00000018296	tsen54	99	37.360	Haplochromis_burtoni
ENSMODG00000007438	TSEN54	98	67.593	ENSHGLG00000007979	TSEN54	98	67.481	Heterocephalus_glaber_female
ENSMODG00000007438	TSEN54	98	66.667	ENSHGLG00100005497	TSEN54	98	66.541	Heterocephalus_glaber_male
ENSMODG00000007438	TSEN54	79	41.629	ENSHCOG00000007481	tsen54	99	41.629	Hippocampus_comes
ENSMODG00000007438	TSEN54	97	41.264	ENSIPUG00000000590	tsen54	96	41.794	Ictalurus_punctatus
ENSMODG00000007438	TSEN54	98	65.250	ENSSTOG00000012883	TSEN54	98	65.348	Ictidomys_tridecemlineatus
ENSMODG00000007438	TSEN54	98	67.343	ENSJJAG00000007365	Tsen54	98	67.416	Jaculus_jaculus
ENSMODG00000007438	TSEN54	95	44.571	ENSKMAG00000006944	tsen54	97	44.571	Kryptolebias_marmoratus
ENSMODG00000007438	TSEN54	95	42.966	ENSLBEG00000004199	tsen54	97	42.966	Labrus_bergylta
ENSMODG00000007438	TSEN54	95	45.287	ENSLACG00000009497	TSEN54	100	45.287	Latimeria_chalumnae
ENSMODG00000007438	TSEN54	98	46.416	ENSLOCG00000011191	tsen54	98	46.606	Lepisosteus_oculatus
ENSMODG00000007438	TSEN54	98	63.993	ENSLAFG00000011655	TSEN54	98	64.394	Loxodonta_africana
ENSMODG00000007438	TSEN54	98	67.658	ENSMFAG00000000712	TSEN54	98	67.481	Macaca_fascicularis
ENSMODG00000007438	TSEN54	98	67.472	ENSMNEG00000029199	TSEN54	98	67.293	Macaca_nemestrina
ENSMODG00000007438	TSEN54	85	66.309	ENSMLEG00000044168	TSEN54	88	66.026	Mandrillus_leucophaeus
ENSMODG00000007438	TSEN54	95	44.571	ENSMAMG00000019773	tsen54	97	43.619	Mastacembelus_armatus
ENSMODG00000007438	TSEN54	95	43.879	ENSMZEG00005000884	tsen54	96	43.985	Maylandia_zebra
ENSMODG00000007438	TSEN54	97	49.262	ENSMGAG00000009556	TSEN54	96	50.284	Meleagris_gallopavo
ENSMODG00000007438	TSEN54	98	65.985	ENSMAUG00000016838	Tsen54	98	66.226	Mesocricetus_auratus
ENSMODG00000007438	TSEN54	98	66.605	ENSMICG00000044012	TSEN54	98	66.415	Microcebus_murinus
ENSMODG00000007438	TSEN54	98	66.543	ENSMOCG00000021585	Tsen54	98	66.792	Microtus_ochrogaster
ENSMODG00000007438	TSEN54	70	60.784	ENSMMOG00000020189	tsen54	85	60.784	Mola_mola
ENSMODG00000007438	TSEN54	95	44.917	ENSMALG00000020573	tsen54	97	44.917	Monopterus_albus
ENSMODG00000007438	TSEN54	98	64.695	MGP_CAROLIEiJ_G0017417	Tsen54	98	64.728	Mus_caroli
ENSMODG00000007438	TSEN54	98	64.880	ENSMUSG00000020781	Tsen54	98	64.916	Mus_musculus
ENSMODG00000007438	TSEN54	98	65.009	MGP_PahariEiJ_G0018547	Tsen54	98	65.047	Mus_pahari
ENSMODG00000007438	TSEN54	98	64.935	MGP_SPRETEiJ_G0018262	Tsen54	98	64.972	Mus_spretus
ENSMODG00000007438	TSEN54	98	68.216	ENSMPUG00000013870	TSEN54	98	67.925	Mustela_putorius_furo
ENSMODG00000007438	TSEN54	98	66.296	ENSMLUG00000015298	TSEN54	98	66.541	Myotis_lucifugus
ENSMODG00000007438	TSEN54	98	67.658	ENSNGAG00000015673	Tsen54	98	67.736	Nannospalax_galili
ENSMODG00000007438	TSEN54	87	78.914	ENSMEUG00000011908	TSEN54	100	78.914	Notamacropus_eugenii
ENSMODG00000007438	TSEN54	98	59.594	ENSOPRG00000012513	TSEN54	98	59.774	Ochotona_princeps
ENSMODG00000007438	TSEN54	95	44.361	ENSONIG00000009543	tsen54	96	44.361	Oreochromis_niloticus
ENSMODG00000007438	TSEN54	98	60.727	ENSOCUG00000009875	TSEN54	98	60.628	Oryctolagus_cuniculus
ENSMODG00000007438	TSEN54	95	43.321	ENSORLG00000000852	tsen54	97	43.321	Oryzias_latipes
ENSMODG00000007438	TSEN54	95	43.570	ENSORLG00020018221	tsen54	97	44.656	Oryzias_latipes_hni
ENSMODG00000007438	TSEN54	95	44.129	ENSORLG00015009413	tsen54	98	44.129	Oryzias_latipes_hsok
ENSMODG00000007438	TSEN54	95	43.762	ENSOMEG00000014402	tsen54	94	43.762	Oryzias_melastigma
ENSMODG00000007438	TSEN54	99	63.303	ENSOGAG00000001442	TSEN54	98	63.826	Otolemur_garnettii
ENSMODG00000007438	TSEN54	85	66.667	ENSOARG00000010361	TSEN54	100	66.667	Ovis_aries
ENSMODG00000007438	TSEN54	93	66.667	ENSPPAG00000043519	TSEN54	100	66.992	Pan_paniscus
ENSMODG00000007438	TSEN54	98	69.963	ENSPPRG00000009162	TSEN54	99	70.189	Panthera_pardus
ENSMODG00000007438	TSEN54	85	67.811	ENSPTIG00000019312	TSEN54	96	67.811	Panthera_tigris_altaica
ENSMODG00000007438	TSEN54	98	68.587	ENSPTRG00000009646	TSEN54	98	68.233	Pan_troglodytes
ENSMODG00000007438	TSEN54	98	67.407	ENSPANG00000020133	TSEN54	98	67.293	Papio_anubis
ENSMODG00000007438	TSEN54	95	45.552	ENSPKIG00000023018	tsen54	100	45.982	Paramormyrops_kingsleyae
ENSMODG00000007438	TSEN54	79	54.338	ENSPSIG00000012807	TSEN54	99	54.338	Pelodiscus_sinensis
ENSMODG00000007438	TSEN54	91	35.317	ENSPMGG00000019578	tsen54	99	35.317	Periophthalmus_magnuspinnatus
ENSMODG00000007438	TSEN54	98	66.357	ENSPEMG00000014857	Tsen54	98	66.415	Peromyscus_maniculatus_bairdii
ENSMODG00000007438	TSEN54	95	45.905	ENSPFOG00000022740	tsen54	96	45.905	Poecilia_formosa
ENSMODG00000007438	TSEN54	95	45.594	ENSPLAG00000014847	tsen54	96	45.594	Poecilia_latipinna
ENSMODG00000007438	TSEN54	95	45.402	ENSPMEG00000022876	tsen54	96	45.402	Poecilia_mexicana
ENSMODG00000007438	TSEN54	97	44.821	ENSPREG00000013090	tsen54	96	45.298	Poecilia_reticulata
ENSMODG00000007438	TSEN54	90	62.805	ENSPPYG00000008629	TSEN54	100	63.211	Pongo_abelii
ENSMODG00000007438	TSEN54	93	61.598	ENSPCAG00000002093	TSEN54	98	62.178	Procavia_capensis
ENSMODG00000007438	TSEN54	98	68.762	ENSPCOG00000027880	TSEN54	99	68.927	Propithecus_coquereli
ENSMODG00000007438	TSEN54	98	69.331	ENSPVAG00000008446	TSEN54	98	69.623	Pteropus_vampyrus
ENSMODG00000007438	TSEN54	91	42.633	ENSPNYG00000010217	tsen54	99	42.718	Pundamilia_nyererei
ENSMODG00000007438	TSEN54	97	44.096	ENSPNAG00000003770	tsen54	97	43.925	Pygocentrus_nattereri
ENSMODG00000007438	TSEN54	98	65.985	ENSRNOG00000004598	Tsen54	98	66.038	Rattus_norvegicus
ENSMODG00000007438	TSEN54	98	67.286	ENSRBIG00000043040	TSEN54	98	67.105	Rhinopithecus_bieti
ENSMODG00000007438	TSEN54	98	67.100	ENSRROG00000030797	TSEN54	98	67.105	Rhinopithecus_roxellana
ENSMODG00000007438	TSEN54	99	64.587	ENSSBOG00000013543	TSEN54	97	64.728	Saimiri_boliviensis_boliviensis
ENSMODG00000007438	TSEN54	100	81.421	ENSSHAG00000018127	TSEN54	97	82.642	Sarcophilus_harrisii
ENSMODG00000007438	TSEN54	80	44.191	ENSSFOG00015004093	tsen54	100	44.419	Scleropages_formosus
ENSMODG00000007438	TSEN54	96	42.642	ENSSMAG00000012449	tsen54	99	42.486	Scophthalmus_maximus
ENSMODG00000007438	TSEN54	95	44.423	ENSSDUG00000021506	tsen54	97	44.423	Seriola_dumerili
ENSMODG00000007438	TSEN54	95	44.423	ENSSLDG00000016303	tsen54	97	44.423	Seriola_lalandi_dorsalis
ENSMODG00000007438	TSEN54	78	53.103	ENSSPUG00000008988	TSEN54	96	53.089	Sphenodon_punctatus
ENSMODG00000007438	TSEN54	91	43.590	ENSSPAG00000008098	-	99	43.590	Stegastes_partitus
ENSMODG00000007438	TSEN54	58	58.621	ENSSPAG00000008047	tsen54	79	58.621	Stegastes_partitus
ENSMODG00000007438	TSEN54	98	70.260	ENSSSCG00000036852	TSEN54	98	70.755	Sus_scrofa
ENSMODG00000007438	TSEN54	85	52.340	ENSTGUG00000008548	TSEN54	100	52.340	Taeniopygia_guttata
ENSMODG00000007438	TSEN54	95	44.338	ENSTRUG00000004230	tsen54	96	44.530	Takifugu_rubripes
ENSMODG00000007438	TSEN54	85	68.670	ENSTTRG00000015828	TSEN54	100	68.670	Tursiops_truncatus
ENSMODG00000007438	TSEN54	80	66.893	ENSUAMG00000010045	TSEN54	100	66.893	Ursus_americanus
ENSMODG00000007438	TSEN54	83	67.325	ENSUMAG00000008979	TSEN54	100	67.325	Ursus_maritimus
ENSMODG00000007438	TSEN54	95	68.714	ENSVVUG00000011411	TSEN54	98	68.642	Vulpes_vulpes
ENSMODG00000007438	TSEN54	96	48.872	ENSXETG00000012532	tsen54	99	65.833	Xenopus_tropicalis
ENSMODG00000007438	TSEN54	71	59.494	ENSXCOG00000018245	tsen54	85	59.494	Xiphophorus_couchianus
ENSMODG00000007438	TSEN54	95	46.125	ENSXMAG00000018818	tsen54	96	46.125	Xiphophorus_maculatus