EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000008056 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: LARK|RBM4A|ZCCHC21|ZCRB3A
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 4504 bases
Position: chr8:12683416-12687919
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000010024	zf-CCHC	PF00098.23	1.3e-07	1	1
ENSMODP00000010024	RRM_5	PF13893.6	1.4e-08	1	2
ENSMODP00000010024	RRM_5	PF13893.6	1.4e-08	2	2
ENSMODP00000010024	RRM_1	PF00076.22	1.9e-33	1	2
ENSMODP00000010024	RRM_1	PF00076.22	1.9e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000010216	-	1270	-	ENSMODP00000010024	366 (aa)	-	F6Z9I7

Gene Model

Click here to download ENSMODG00000008056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000008056's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000008056	-	100	90.489	ENSG00000173933	RBM4	100	96.951	Homo_sapiens
ENSMODG00000008056	-	100	86.141	ENSG00000173914	RBM4B	97	96.403	Homo_sapiens
ENSMODG00000008056	-	99	67.480	ENSG00000248643	RBM14-RBM4	100	68.022	Homo_sapiens
ENSMODG00000008056	-	100	86.957	ENSAMEG00000010906	RBM4B	100	86.141	Ailuropoda_melanoleuca
ENSMODG00000008056	-	100	91.576	ENSAMEG00000010914	RBM4	100	91.304	Ailuropoda_melanoleuca
ENSMODG00000008056	-	100	86.141	ENSANAG00000023478	RBM4B	97	96.403	Aotus_nancymaae
ENSMODG00000008056	-	100	89.674	ENSBTAG00000031688	RBM4	100	89.946	Bos_taurus
ENSMODG00000008056	-	100	86.957	ENSBTAG00000000423	RBM4B	100	86.141	Bos_taurus
ENSMODG00000008056	-	100	85.870	ENSCJAG00000013666	RBM4B	97	96.403	Callithrix_jacchus
ENSMODG00000008056	-	100	91.576	ENSCAFG00000012388	RBM4	100	91.304	Canis_familiaris
ENSMODG00000008056	-	100	86.685	ENSCAFG00000012378	RBM4B	100	85.870	Canis_familiaris
ENSMODG00000008056	-	100	86.685	ENSCAFG00020015519	RBM4B	100	85.870	Canis_lupus_dingo
ENSMODG00000008056	-	100	91.576	ENSCAFG00020015515	RBM4	100	91.304	Canis_lupus_dingo
ENSMODG00000008056	-	100	89.674	ENSCHIG00000020613	RBM4	100	89.946	Capra_hircus
ENSMODG00000008056	-	100	86.685	ENSCHIG00000008907	RBM4B	100	85.870	Capra_hircus
ENSMODG00000008056	-	66	78.279	ENSTSYG00000009580	RBM4B	96	77.049	Carlito_syrichta
ENSMODG00000008056	-	100	86.413	ENSCAPG00000009570	RBM4B	100	85.870	Cavia_aperea
ENSMODG00000008056	-	100	92.120	ENSCAPG00000016600	RBM4	97	97.101	Cavia_aperea
ENSMODG00000008056	-	100	92.120	ENSCPOG00000013194	RBM4	97	97.101	Cavia_porcellus
ENSMODG00000008056	-	100	86.413	ENSCPOG00000013689	RBM4B	100	85.870	Cavia_porcellus
ENSMODG00000008056	-	54	70.202	ENSCCAG00000023319	-	98	70.202	Cebus_capucinus
ENSMODG00000008056	-	100	86.141	ENSCCAG00000016501	RBM4B	97	96.403	Cebus_capucinus
ENSMODG00000008056	-	100	86.141	ENSCATG00000035353	RBM4B	97	96.403	Cercocebus_atys
ENSMODG00000008056	-	100	91.848	ENSCLAG00000014756	RBM4	97	97.101	Chinchilla_lanigera
ENSMODG00000008056	-	100	86.413	ENSCLAG00000015287	RBM4B	100	85.870	Chinchilla_lanigera
ENSMODG00000008056	-	100	86.141	ENSCSAG00000008361	RBM4B	100	85.326	Chlorocebus_sabaeus
ENSMODG00000008056	-	100	86.957	ENSCHOG00000002892	RBM4B	100	86.413	Choloepus_hoffmanni
ENSMODG00000008056	-	62	87.826	ENSCHOG00000009753	RBM14-RBM4	100	87.391	Choloepus_hoffmanni
ENSMODG00000008056	-	100	74.026	ENSCPBG00000023800	-	100	73.421	Chrysemys_picta_bellii
ENSMODG00000008056	-	100	86.141	ENSCANG00000021868	RBM4B	97	96.403	Colobus_angolensis_palliatus
ENSMODG00000008056	-	100	88.859	ENSCGRG00001016609	-	97	97.101	Cricetulus_griseus_chok1gshd
ENSMODG00000008056	-	100	83.967	ENSCGRG00001024693	Rbm4b	100	84.239	Cricetulus_griseus_chok1gshd
ENSMODG00000008056	-	100	88.859	ENSCGRG00000010183	-	97	97.101	Cricetulus_griseus_crigri
ENSMODG00000008056	-	100	83.967	ENSCGRG00000012112	Rbm4b	100	84.239	Cricetulus_griseus_crigri
ENSMODG00000008056	-	100	91.848	ENSDNOG00000032390	RBM4	100	91.576	Dasypus_novemcinctus
ENSMODG00000008056	-	100	86.685	ENSDNOG00000019500	-	100	85.870	Dasypus_novemcinctus
ENSMODG00000008056	-	100	85.598	ENSDNOG00000045639	-	100	84.783	Dasypus_novemcinctus
ENSMODG00000008056	-	100	88.315	ENSDORG00000004538	-	97	95.652	Dipodomys_ordii
ENSMODG00000008056	-	100	84.239	ENSDORG00000029108	Rbm4b	100	84.511	Dipodomys_ordii
ENSMODG00000008056	-	62	62.445	ENSETEG00000018142	-	100	62.882	Echinops_telfairi
ENSMODG00000008056	-	100	86.685	ENSEASG00005005068	RBM4B	100	85.870	Equus_asinus_asinus
ENSMODG00000008056	-	100	89.946	ENSEASG00005005064	RBM4	100	89.402	Equus_asinus_asinus
ENSMODG00000008056	-	100	89.946	ENSECAG00000022940	RBM4	100	89.402	Equus_caballus
ENSMODG00000008056	-	100	86.413	ENSECAG00000022987	RBM4B	100	85.598	Equus_caballus
ENSMODG00000008056	-	100	86.685	ENSEEUG00000000058	RBM4B	100	85.870	Erinaceus_europaeus
ENSMODG00000008056	-	100	91.576	ENSFCAG00000029651	RBM4	97	96.377	Felis_catus
ENSMODG00000008056	-	100	86.141	ENSFCAG00000007394	RBM4B	97	96.403	Felis_catus
ENSMODG00000008056	-	100	68.365	ENSFALG00000002073	-	100	67.473	Ficedula_albicollis
ENSMODG00000008056	-	100	92.391	ENSFDAG00000005447	RBM4	97	97.101	Fukomys_damarensis
ENSMODG00000008056	-	100	86.413	ENSFDAG00000015530	RBM4B	100	85.870	Fukomys_damarensis
ENSMODG00000008056	-	100	74.670	ENSGALG00000037946	-	100	73.529	Gallus_gallus
ENSMODG00000008056	-	100	73.766	ENSGAGG00000008553	-	100	73.158	Gopherus_agassizii
ENSMODG00000008056	-	100	86.141	ENSGGOG00000011698	RBM4B	97	96.403	Gorilla_gorilla
ENSMODG00000008056	-	100	86.685	ENSHGLG00000016412	-	100	86.141	Heterocephalus_glaber_female
ENSMODG00000008056	-	100	92.391	ENSHGLG00000009991	RBM4	97	97.101	Heterocephalus_glaber_female
ENSMODG00000008056	-	100	72.554	ENSHGLG00000002853	-	100	72.554	Heterocephalus_glaber_female
ENSMODG00000008056	-	79	54.142	ENSHGLG00000000117	-	95	64.305	Heterocephalus_glaber_female
ENSMODG00000008056	-	100	79.620	ENSHGLG00100003854	RBM4	97	97.101	Heterocephalus_glaber_male
ENSMODG00000008056	-	96	73.580	ENSHGLG00100020033	-	100	73.580	Heterocephalus_glaber_male
ENSMODG00000008056	-	100	85.637	ENSHGLG00100003978	-	100	85.366	Heterocephalus_glaber_male
ENSMODG00000008056	-	100	91.848	ENSSTOG00000022811	RBM4	97	96.377	Ictidomys_tridecemlineatus
ENSMODG00000008056	-	100	86.413	ENSSTOG00000011226	RBM4B	100	85.870	Ictidomys_tridecemlineatus
ENSMODG00000008056	-	100	83.424	ENSJJAG00000020870	Rbm4b	100	82.609	Jaculus_jaculus
ENSMODG00000008056	-	100	89.130	ENSLAFG00000028147	-	100	89.402	Loxodonta_africana
ENSMODG00000008056	-	100	85.598	ENSLAFG00000002285	RBM4B	100	85.870	Loxodonta_africana
ENSMODG00000008056	-	100	86.141	ENSMFAG00000033927	RBM4B	97	97.101	Macaca_fascicularis
ENSMODG00000008056	-	100	86.141	ENSMNEG00000043371	RBM4B	97	96.403	Macaca_nemestrina
ENSMODG00000008056	-	100	86.141	ENSMLEG00000028563	RBM4B	97	97.101	Mandrillus_leucophaeus
ENSMODG00000008056	-	100	83.152	ENSMAUG00000017027	Rbm4b	100	83.152	Mesocricetus_auratus
ENSMODG00000008056	-	100	86.957	ENSMICG00000003820	RBM4B	97	96.403	Microcebus_murinus
ENSMODG00000008056	-	100	83.967	ENSMOCG00000001835	Rbm4b	100	84.239	Microtus_ochrogaster
ENSMODG00000008056	-	100	86.450	MGP_CAROLIEiJ_G0022516	-	97	97.101	Mus_caroli
ENSMODG00000008056	-	100	83.967	MGP_CAROLIEiJ_G0022515	Rbm4b	100	84.239	Mus_caroli
ENSMODG00000008056	-	99	63.243	MGP_CAROLIEiJ_G0022514	-	100	64.054	Mus_caroli
ENSMODG00000008056	-	100	83.696	ENSMUSG00000033760	Rbm4b	91	96.403	Mus_musculus
ENSMODG00000008056	-	100	85.908	ENSMUSG00000094936	Rbm4	100	97.674	Mus_musculus
ENSMODG00000008056	-	100	85.908	ENSMUSG00000096370	Gm21992	100	86.721	Mus_musculus
ENSMODG00000008056	-	100	86.179	MGP_PahariEiJ_G0014011	-	100	86.721	Mus_pahari
ENSMODG00000008056	-	100	86.179	MGP_PahariEiJ_G0014013	-	97	97.101	Mus_pahari
ENSMODG00000008056	-	100	83.424	MGP_PahariEiJ_G0014012	Rbm4b	100	83.696	Mus_pahari
ENSMODG00000008056	-	100	73.196	MGP_SPRETEiJ_G0023429	-	100	73.540	Mus_spretus
ENSMODG00000008056	-	100	69.184	MGP_SPRETEiJ_G0023428	-	94	70.091	Mus_spretus
ENSMODG00000008056	-	100	69.184	MGP_SPRETEiJ_G0023430	-	100	70.091	Mus_spretus
ENSMODG00000008056	-	100	91.576	ENSMPUG00000003443	RBM4	100	91.304	Mustela_putorius_furo
ENSMODG00000008056	-	100	87.228	ENSMPUG00000003450	RBM4B	100	86.413	Mustela_putorius_furo
ENSMODG00000008056	-	100	85.054	ENSMLUG00000001290	RBM4B	100	83.967	Myotis_lucifugus
ENSMODG00000008056	-	99	88.798	ENSMLUG00000004076	RBM4	95	89.344	Myotis_lucifugus
ENSMODG00000008056	-	100	84.239	ENSNGAG00000016292	Rbm4b	100	83.967	Nannospalax_galili
ENSMODG00000008056	-	100	85.326	ENSNLEG00000006213	RBM4B	97	96.403	Nomascus_leucogenys
ENSMODG00000008056	-	100	90.489	ENSNLEG00000035021	RBM4	97	96.377	Nomascus_leucogenys
ENSMODG00000008056	-	62	92.140	ENSMEUG00000005739	-	100	91.703	Notamacropus_eugenii
ENSMODG00000008056	-	100	90.489	ENSMEUG00000001445	-	100	90.217	Notamacropus_eugenii
ENSMODG00000008056	-	100	87.228	ENSOPRG00000009158	RBM4B	100	86.413	Ochotona_princeps
ENSMODG00000008056	-	100	91.304	ENSOPRG00000009149	RBM4	100	91.033	Ochotona_princeps
ENSMODG00000008056	-	100	73.370	ENSODEG00000001866	-	100	73.641	Octodon_degus
ENSMODG00000008056	-	100	86.413	ENSODEG00000017696	-	100	85.870	Octodon_degus
ENSMODG00000008056	-	100	76.567	ENSOANG00000003143	-	84	75.477	Ornithorhynchus_anatinus
ENSMODG00000008056	-	100	85.014	ENSOANG00000011036	-	100	84.196	Ornithorhynchus_anatinus
ENSMODG00000008056	-	100	86.413	ENSOCUG00000006695	LARK	100	85.870	Oryctolagus_cuniculus
ENSMODG00000008056	-	100	91.848	ENSOCUG00000004731	RBM4	100	91.576	Oryctolagus_cuniculus
ENSMODG00000008056	-	100	86.141	ENSOGAG00000015648	RBM4B	100	86.141	Otolemur_garnettii
ENSMODG00000008056	-	100	91.304	ENSOGAG00000015647	RBM4	100	91.033	Otolemur_garnettii
ENSMODG00000008056	-	100	86.413	ENSOARG00000007759	RBM4B	100	86.141	Ovis_aries
ENSMODG00000008056	-	100	87.466	ENSOARG00000007700	RBM4	100	87.738	Ovis_aries
ENSMODG00000008056	-	100	86.141	ENSPPAG00000015125	RBM4B	97	96.403	Pan_paniscus
ENSMODG00000008056	-	100	85.870	ENSPPRG00000003388	RBM4B	97	96.403	Panthera_pardus
ENSMODG00000008056	-	100	91.576	ENSPPRG00000003533	RBM4	97	96.377	Panthera_pardus
ENSMODG00000008056	-	100	78.533	ENSPTIG00000016180	RBM4	97	97.101	Panthera_tigris_altaica
ENSMODG00000008056	-	100	85.870	ENSPTIG00000015426	RBM4B	97	96.403	Panthera_tigris_altaica
ENSMODG00000008056	-	100	86.141	ENSPTRG00000003935	RBM4B	97	96.403	Pan_troglodytes
ENSMODG00000008056	-	100	86.141	ENSPANG00000020672	RBM4B	97	96.403	Papio_anubis
ENSMODG00000008056	-	100	74.142	ENSPSIG00000003430	-	100	73.529	Pelodiscus_sinensis
ENSMODG00000008056	-	75	77.778	ENSPSIG00000003477	-	95	77.700	Pelodiscus_sinensis
ENSMODG00000008056	-	100	84.511	ENSPEMG00000009144	Rbm4b	100	84.783	Peromyscus_maniculatus_bairdii
ENSMODG00000008056	-	100	89.402	ENSPPYG00000003012	RBM4	100	89.946	Pongo_abelii
ENSMODG00000008056	-	100	86.141	ENSPPYG00000003010	RBM4B	100	85.326	Pongo_abelii
ENSMODG00000008056	-	100	90.191	ENSPCAG00000003393	-	100	90.463	Procavia_capensis
ENSMODG00000008056	-	100	86.957	ENSPCOG00000027885	RBM4B	97	96.403	Propithecus_coquereli
ENSMODG00000008056	-	100	86.957	ENSPVAG00000010487	RBM4B	100	86.141	Pteropus_vampyrus
ENSMODG00000008056	-	100	91.033	ENSPVAG00000010486	RBM4	100	90.761	Pteropus_vampyrus
ENSMODG00000008056	-	100	88.347	ENSRNOG00000050741	Rbm4	97	97.101	Rattus_norvegicus
ENSMODG00000008056	-	100	84.239	ENSRNOG00000061795	Rbm4b	100	84.511	Rattus_norvegicus
ENSMODG00000008056	-	100	86.141	ENSRBIG00000019394	RBM4B	97	96.403	Rhinopithecus_bieti
ENSMODG00000008056	-	100	86.141	ENSRROG00000032850	RBM4B	97	96.403	Rhinopithecus_roxellana
ENSMODG00000008056	-	100	85.598	ENSSBOG00000034474	RBM4B	97	95.683	Saimiri_boliviensis_boliviensis
ENSMODG00000008056	-	100	89.918	ENSSHAG00000008386	-	100	89.373	Sarcophilus_harrisii
ENSMODG00000008056	-	100	86.141	ENSSARG00000010710	RBM4B	100	85.598	Sorex_araneus
ENSMODG00000008056	-	100	91.576	ENSSSCG00000032437	RBM4	100	91.304	Sus_scrofa
ENSMODG00000008056	-	77	79.110	ENSTGUG00000016779	-	94	78.397	Taeniopygia_guttata
ENSMODG00000008056	-	63	91.818	ENSTBEG00000003727	-	68	92.488	Tupaia_belangeri
ENSMODG00000008056	-	100	84.511	ENSTBEG00000003748	RBM4B	100	83.967	Tupaia_belangeri
ENSMODG00000008056	-	100	86.685	ENSTTRG00000011166	RBM4B	100	85.870	Tursiops_truncatus
ENSMODG00000008056	-	100	92.371	ENSTTRG00000011164	RBM4	100	92.098	Tursiops_truncatus
ENSMODG00000008056	-	100	87.228	ENSUAMG00000004745	RBM4B	100	86.413	Ursus_americanus
ENSMODG00000008056	-	100	91.576	ENSUAMG00000014882	RBM4	97	96.377	Ursus_americanus
ENSMODG00000008056	-	64	91.489	ENSUMAG00000011738	-	97	96.377	Ursus_maritimus
ENSMODG00000008056	-	100	90.191	ENSVPAG00000001949	RBM4	100	89.918	Vicugna_pacos
ENSMODG00000008056	-	100	86.685	ENSVPAG00000001950	RBM4B	100	85.870	Vicugna_pacos
ENSMODG00000008056	-	100	86.685	ENSVVUG00000010619	RBM4B	100	85.870	Vulpes_vulpes
ENSMODG00000008056	-	100	91.033	ENSVVUG00000010622	RBM4	100	90.761	Vulpes_vulpes