EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000008227 (Gene tree)
Gene ID: 100017691
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 9444 bases
Position: chr4:179460320-179469763
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000010225	RRM_1	PF00076.22	1.9e-16	1	1
ENSMODP00000010225	RRM_3	PF08777.11	2.2e-26	1	1
ENSMODP00000010225	La	PF05383.17	2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000010423	-	1218	-	ENSMODP00000010225	405 (aa)	-	F6ZY45

Gene Model

Click here to download ENSMODG00000008227's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000008227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000008227	-	100	76.039	ENSMODG00000019271	-	100	76.773
ENSMODG00000008227	-	100	74.328	ENSMODG00000007027	-	100	72.861

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000008227	-	100	78.469	ENSG00000138385	SSB	100	86.667	Homo_sapiens
ENSMODG00000008227	-	99	54.146	ENSAPOG00000003448	ssb	96	56.168	Acanthochromis_polyacanthus
ENSMODG00000008227	-	100	78.333	ENSAMEG00000010507	SSB	100	78.095	Ailuropoda_melanoleuca
ENSMODG00000008227	-	93	56.104	ENSACIG00000001738	ssb	97	55.844	Amphilophus_citrinellus
ENSMODG00000008227	-	99	54.390	ENSAOCG00000020398	ssb	96	56.430	Amphiprion_ocellaris
ENSMODG00000008227	-	99	54.634	ENSAPEG00000020395	ssb	96	56.693	Amphiprion_percula
ENSMODG00000008227	-	99	56.341	ENSATEG00000016884	ssb	100	56.341	Anabas_testudineus
ENSMODG00000008227	-	100	68.396	ENSAPLG00000006109	SSB	100	71.059	Anas_platyrhynchos
ENSMODG00000008227	-	100	63.810	ENSACAG00000017008	SSB	99	63.333	Anolis_carolinensis
ENSMODG00000008227	-	100	68.675	ENSANAG00000027195	-	100	69.639	Aotus_nancymaae
ENSMODG00000008227	-	99	52.068	ENSACLG00000010798	ssb	100	52.311	Astatotilapia_calliptera
ENSMODG00000008227	-	98	52.657	ENSAMXG00000012606	ssb	92	53.747	Astyanax_mexicanus
ENSMODG00000008227	-	100	79.277	ENSBTAG00000008716	SSB	100	78.313	Bos_taurus
ENSMODG00000008227	-	73	35.855	WBGene00016653	C44E4.4	77	37.171	Caenorhabditis_elegans
ENSMODG00000008227	-	100	78.795	ENSCJAG00000045073	SSB	100	78.072	Callithrix_jacchus
ENSMODG00000008227	-	100	78.846	ENSCAFG00000012418	SSB	100	77.885	Canis_familiaris
ENSMODG00000008227	-	100	78.846	ENSCAFG00020002900	SSB	100	77.885	Canis_lupus_dingo
ENSMODG00000008227	-	100	74.755	ENSCHIG00000022196	-	100	74.265	Capra_hircus
ENSMODG00000008227	-	100	78.795	ENSCHIG00000022624	-	100	78.072	Capra_hircus
ENSMODG00000008227	-	100	79.036	ENSTSYG00000000097	SSB	100	78.313	Carlito_syrichta
ENSMODG00000008227	-	100	80.482	ENSCPOG00000003338	SSB	100	79.759	Cavia_porcellus
ENSMODG00000008227	-	100	78.795	ENSCCAG00000035147	SSB	100	78.072	Cebus_capucinus
ENSMODG00000008227	-	72	76.667	ENSCATG00000036701	SSB	84	75.667	Cercocebus_atys
ENSMODG00000008227	-	100	59.658	ENSCATG00000042909	-	100	58.924	Cercocebus_atys
ENSMODG00000008227	-	100	80.000	ENSCLAG00000015617	-	100	79.277	Chinchilla_lanigera
ENSMODG00000008227	-	100	79.036	ENSCSAG00000015200	SSB	89	78.313	Chlorocebus_sabaeus
ENSMODG00000008227	-	98	71.429	ENSCSAG00000018390	-	96	71.429	Chlorocebus_sabaeus
ENSMODG00000008227	-	100	80.241	ENSCHOG00000007763	SSB	100	79.518	Choloepus_hoffmanni
ENSMODG00000008227	-	100	75.418	ENSCPBG00000006519	SSB	100	75.418	Chrysemys_picta_bellii
ENSMODG00000008227	-	96	61.654	ENSCANG00000028838	-	91	60.051	Colobus_angolensis_palliatus
ENSMODG00000008227	-	100	66.425	ENSCANG00000033240	-	100	65.700	Colobus_angolensis_palliatus
ENSMODG00000008227	-	100	78.795	ENSCANG00000027695	SSB	100	78.072	Colobus_angolensis_palliatus
ENSMODG00000008227	-	100	70.460	ENSCGRG00001024831	Ssb	100	69.903	Cricetulus_griseus_chok1gshd
ENSMODG00000008227	-	100	70.460	ENSCGRG00000005387	Ssb	100	69.903	Cricetulus_griseus_crigri
ENSMODG00000008227	-	98	55.693	ENSCSEG00000011599	ssb	99	55.693	Cynoglossus_semilaevis
ENSMODG00000008227	-	99	54.390	ENSCVAG00000021558	ssb	100	54.878	Cyprinodon_variegatus
ENSMODG00000008227	-	98	54.258	ENSDARG00000029252	ssb	99	53.382	Danio_rerio
ENSMODG00000008227	-	100	80.482	ENSDNOG00000013450	SSB	100	79.759	Dasypus_novemcinctus
ENSMODG00000008227	-	100	75.309	ENSDORG00000005543	Ssb	100	75.062	Dipodomys_ordii
ENSMODG00000008227	-	85	33.243	FBgn0011638	La	84	34.311	Drosophila_melanogaster
ENSMODG00000008227	-	78	50.000	ENSEBUG00000001237	ssb	92	46.978	Eptatretus_burgeri
ENSMODG00000008227	-	100	79.759	ENSEASG00005022835	SSB	100	79.036	Equus_asinus_asinus
ENSMODG00000008227	-	100	80.000	ENSECAG00000018495	SSB	100	79.277	Equus_caballus
ENSMODG00000008227	-	74	69.667	ENSEEUG00000008077	SSB	78	69.333	Erinaceus_europaeus
ENSMODG00000008227	-	99	56.416	ENSELUG00000020929	ssb	100	56.115	Esox_lucius
ENSMODG00000008227	-	100	78.846	ENSFCAG00000011601	SSB	100	77.644	Felis_catus
ENSMODG00000008227	-	100	69.856	ENSFALG00000000930	SSB	100	72.488	Ficedula_albicollis
ENSMODG00000008227	-	100	79.518	ENSFDAG00000000598	SSB	100	78.795	Fukomys_damarensis
ENSMODG00000008227	-	74	52.427	ENSFHEG00000003268	ssb	95	52.351	Fundulus_heteroclitus
ENSMODG00000008227	-	97	53.995	ENSGMOG00000002664	ssb	99	53.218	Gadus_morhua
ENSMODG00000008227	-	100	72.010	ENSGALG00000009677	SSB	100	71.292	Gallus_gallus
ENSMODG00000008227	-	99	53.865	ENSGAFG00000002749	ssb	93	55.469	Gambusia_affinis
ENSMODG00000008227	-	99	52.439	ENSGACG00000005107	ssb	94	53.525	Gasterosteus_aculeatus
ENSMODG00000008227	-	100	74.702	ENSGAGG00000007807	SSB	100	73.986	Gopherus_agassizii
ENSMODG00000008227	-	100	64.337	ENSGGOG00000024891	-	100	63.855	Gorilla_gorilla
ENSMODG00000008227	-	55	71.489	ENSGGOG00000023471	-	95	68.182	Gorilla_gorilla
ENSMODG00000008227	-	99	52.555	ENSHBUG00000006584	ssb	100	51.707	Haplochromis_burtoni
ENSMODG00000008227	-	100	71.533	ENSHGLG00000005832	-	100	70.631	Heterocephalus_glaber_female
ENSMODG00000008227	-	100	79.759	ENSHGLG00000017580	-	100	79.759	Heterocephalus_glaber_female
ENSMODG00000008227	-	100	71.703	ENSHGLG00000004478	-	100	70.743	Heterocephalus_glaber_female
ENSMODG00000008227	-	100	79.759	ENSHGLG00100003084	-	100	79.759	Heterocephalus_glaber_male
ENSMODG00000008227	-	100	69.175	ENSHGLG00100008767	-	100	68.689	Heterocephalus_glaber_male
ENSMODG00000008227	-	98	54.321	ENSHCOG00000019011	ssb	99	54.321	Hippocampus_comes
ENSMODG00000008227	-	97	54.126	ENSIPUG00000003681	SSB	90	56.464	Ictalurus_punctatus
ENSMODG00000008227	-	100	79.036	ENSSTOG00000008416	SSB	100	76.867	Ictidomys_tridecemlineatus
ENSMODG00000008227	-	100	69.928	ENSJJAG00000023158	-	100	68.825	Jaculus_jaculus
ENSMODG00000008227	-	99	56.863	ENSJJAG00000016250	-	99	55.283	Jaculus_jaculus
ENSMODG00000008227	-	99	55.366	ENSKMAG00000017317	ssb	93	56.919	Kryptolebias_marmoratus
ENSMODG00000008227	-	99	53.659	ENSLBEG00000017345	ssb	94	54.188	Labrus_bergylta
ENSMODG00000008227	-	99	66.906	ENSLACG00000014056	SSB	99	65.228	Latimeria_chalumnae
ENSMODG00000008227	-	98	63.902	ENSLOCG00000007933	ssb	99	63.415	Lepisosteus_oculatus
ENSMODG00000008227	-	100	75.829	ENSLAFG00000000867	-	100	76.540	Loxodonta_africana
ENSMODG00000008227	-	73	61.258	ENSLAFG00000026721	-	99	61.258	Loxodonta_africana
ENSMODG00000008227	-	100	66.024	ENSLAFG00000028909	-	100	65.783	Loxodonta_africana
ENSMODG00000008227	-	100	78.795	ENSMFAG00000039066	SSB	100	78.072	Macaca_fascicularis
ENSMODG00000008227	-	89	67.867	ENSMFAG00000041478	-	93	69.725	Macaca_fascicularis
ENSMODG00000008227	-	99	56.265	ENSMMUG00000039889	-	100	56.020	Macaca_mulatta
ENSMODG00000008227	-	100	78.795	ENSMMUG00000023051	SSB	100	78.072	Macaca_mulatta
ENSMODG00000008227	-	100	66.908	ENSMMUG00000011724	-	97	64.146	Macaca_mulatta
ENSMODG00000008227	-	89	67.867	ENSMNEG00000034698	-	93	69.725	Macaca_nemestrina
ENSMODG00000008227	-	100	70.531	ENSMNEG00000028321	SSB	85	84.348	Macaca_nemestrina
ENSMODG00000008227	-	100	55.556	ENSMLEG00000042644	-	100	52.696	Mandrillus_leucophaeus
ENSMODG00000008227	-	100	78.795	ENSMLEG00000035717	SSB	100	78.072	Mandrillus_leucophaeus
ENSMODG00000008227	-	99	57.178	ENSMAMG00000004800	ssb	100	57.073	Mastacembelus_armatus
ENSMODG00000008227	-	99	52.068	ENSMZEG00005005749	ssb	100	52.311	Maylandia_zebra
ENSMODG00000008227	-	100	72.249	ENSMGAG00000010328	SSB	95	79.592	Meleagris_gallopavo
ENSMODG00000008227	-	99	79.419	ENSMICG00000028252	-	99	78.692	Microcebus_murinus
ENSMODG00000008227	-	98	71.960	ENSMICG00000033304	-	96	72.610	Microcebus_murinus
ENSMODG00000008227	-	91	52.368	ENSMALG00000008045	ssb	90	55.614	Monopterus_albus
ENSMODG00000008227	-	100	70.983	MGP_CAROLIEiJ_G0023629	-	100	83.696	Mus_caroli
ENSMODG00000008227	-	100	70.743	ENSMUSG00000068882	Ssb	100	83.696	Mus_musculus
ENSMODG00000008227	-	100	70.743	MGP_PahariEiJ_G0025081	-	100	82.609	Mus_pahari
ENSMODG00000008227	-	100	70.743	MGP_SPRETEiJ_G0024551	Ssb	100	83.696	Mus_spretus
ENSMODG00000008227	-	100	79.036	ENSMPUG00000000785	SSB	100	78.313	Mustela_putorius_furo
ENSMODG00000008227	-	100	77.698	ENSMLUG00000016316	SSB	100	77.698	Myotis_lucifugus
ENSMODG00000008227	-	99	52.670	ENSNBRG00000012661	ssb	100	51.942	Neolamprologus_brichardi
ENSMODG00000008227	-	100	59.512	ENSNLEG00000028754	-	100	58.937	Nomascus_leucogenys
ENSMODG00000008227	-	100	79.036	ENSNLEG00000004958	SSB	100	78.313	Nomascus_leucogenys
ENSMODG00000008227	-	60	94.355	ENSMEUG00000001650	-	100	94.355	Notamacropus_eugenii
ENSMODG00000008227	-	51	83.226	ENSOPRG00000008475	-	76	83.226	Ochotona_princeps
ENSMODG00000008227	-	93	76.562	ENSODEG00000004202	-	100	74.740	Octodon_degus
ENSMODG00000008227	-	99	52.184	ENSONIG00000008776	ssb	100	51.825	Oreochromis_niloticus
ENSMODG00000008227	-	100	83.133	ENSOANG00000008543	SSB	100	82.410	Ornithorhynchus_anatinus
ENSMODG00000008227	-	100	79.808	ENSOCUG00000010396	SSB	100	79.808	Oryctolagus_cuniculus
ENSMODG00000008227	-	99	54.015	ENSORLG00000017208	ssb	100	54.964	Oryzias_latipes
ENSMODG00000008227	-	99	54.854	ENSORLG00020022574	ssb	100	55.340	Oryzias_latipes_hni
ENSMODG00000008227	-	99	55.231	ENSORLG00015016592	ssb	100	55.231	Oryzias_latipes_hsok
ENSMODG00000008227	-	99	55.097	ENSOMEG00000003193	ssb	100	55.583	Oryzias_melastigma
ENSMODG00000008227	-	100	76.066	ENSOGAG00000029768	SSB	100	76.066	Otolemur_garnettii
ENSMODG00000008227	-	100	79.036	ENSOARG00000002906	SSB	100	78.313	Ovis_aries
ENSMODG00000008227	-	100	63.855	ENSPPAG00000032427	-	100	75.194	Pan_paniscus
ENSMODG00000008227	-	100	78.469	ENSPPAG00000042673	SSB	100	77.751	Pan_paniscus
ENSMODG00000008227	-	91	62.963	ENSPPAG00000006189	-	96	60.212	Pan_paniscus
ENSMODG00000008227	-	100	78.846	ENSPPRG00000006599	SSB	100	77.644	Panthera_pardus
ENSMODG00000008227	-	100	78.606	ENSPTIG00000011021	SSB	97	77.404	Panthera_tigris_altaica
ENSMODG00000008227	-	100	63.570	ENSPTRG00000042880	-	100	63.081	Pan_troglodytes
ENSMODG00000008227	-	100	78.469	ENSPTRG00000012620	SSB	100	77.751	Pan_troglodytes
ENSMODG00000008227	-	100	57.702	ENSPANG00000034126	-	100	56.068	Papio_anubis
ENSMODG00000008227	-	98	53.186	ENSPANG00000031877	-	91	51.295	Papio_anubis
ENSMODG00000008227	-	100	78.795	ENSPANG00000007440	SSB	100	78.072	Papio_anubis
ENSMODG00000008227	-	99	59.223	ENSPKIG00000019325	ssb	99	59.466	Paramormyrops_kingsleyae
ENSMODG00000008227	-	100	72.554	ENSPSIG00000002265	SSB	93	72.792	Pelodiscus_sinensis
ENSMODG00000008227	-	85	51.412	ENSPMGG00000020075	ssb	91	51.105	Periophthalmus_magnuspinnatus
ENSMODG00000008227	-	80	51.368	ENSPMAG00000002982	ssb	87	47.105	Petromyzon_marinus
ENSMODG00000008227	-	100	90.120	ENSPCIG00000028591	-	100	90.120	Phascolarctos_cinereus
ENSMODG00000008227	-	99	53.771	ENSPFOG00000009650	ssb	100	54.988	Poecilia_formosa
ENSMODG00000008227	-	99	54.501	ENSPLAG00000020498	ssb	100	54.988	Poecilia_latipinna
ENSMODG00000008227	-	99	53.528	ENSPMEG00000001051	ssb	100	54.745	Poecilia_mexicana
ENSMODG00000008227	-	92	56.693	ENSPREG00000003708	ssb	97	56.693	Poecilia_reticulata
ENSMODG00000008227	-	100	79.036	ENSPPYG00000012919	SSB	100	78.313	Pongo_abelii
ENSMODG00000008227	-	95	78.811	ENSPCAG00000010276	SSB	100	78.036	Procavia_capensis
ENSMODG00000008227	-	100	68.193	ENSPCOG00000023189	-	100	67.470	Propithecus_coquereli
ENSMODG00000008227	-	100	76.386	ENSPCOG00000015741	-	100	73.659	Propithecus_coquereli
ENSMODG00000008227	-	88	80.165	ENSPVAG00000006615	SSB	99	78.237	Pteropus_vampyrus
ENSMODG00000008227	-	99	52.068	ENSPNYG00000006444	ssb	100	52.311	Pundamilia_nyererei
ENSMODG00000008227	-	98	53.995	ENSPNAG00000011708	ssb	90	55.208	Pygocentrus_nattereri
ENSMODG00000008227	-	100	69.586	ENSRNOG00000011606	AABR07061825.1	100	68.537	Rattus_norvegicus
ENSMODG00000008227	-	100	70.504	ENSRNOG00000007998	Ssb	100	69.305	Rattus_norvegicus
ENSMODG00000008227	-	100	56.490	ENSRBIG00000029918	-	100	54.940	Rhinopithecus_bieti
ENSMODG00000008227	-	89	70.699	ENSRBIG00000041608	-	98	69.355	Rhinopithecus_bieti
ENSMODG00000008227	-	100	65.700	ENSRBIG00000041972	SSB	88	84.348	Rhinopithecus_bieti
ENSMODG00000008227	-	94	65.464	ENSRBIG00000041232	-	98	64.948	Rhinopithecus_bieti
ENSMODG00000008227	-	100	78.795	ENSRROG00000040346	SSB	100	78.072	Rhinopithecus_roxellana
ENSMODG00000008227	-	98	66.173	ENSRROG00000031684	-	100	65.679	Rhinopithecus_roxellana
ENSMODG00000008227	-	100	64.663	ENSRROG00000007149	-	100	63.133	Rhinopithecus_roxellana
ENSMODG00000008227	-	97	71.324	ENSRROG00000034102	-	97	70.443	Rhinopithecus_roxellana
ENSMODG00000008227	-	100	79.277	ENSSBOG00000027204	SSB	100	78.554	Saimiri_boliviensis_boliviensis
ENSMODG00000008227	-	100	89.157	ENSSHAG00000018062	SSB	100	89.157	Sarcophilus_harrisii
ENSMODG00000008227	-	99	60.048	ENSSFOG00015000550	ssb	100	60.766	Scleropages_formosus
ENSMODG00000008227	-	98	52.273	ENSSMAG00000013885	ssb	99	55.643	Scophthalmus_maximus
ENSMODG00000008227	-	99	55.610	ENSSDUG00000020117	ssb	100	55.610	Seriola_dumerili
ENSMODG00000008227	-	99	53.846	ENSSLDG00000002525	ssb	100	53.846	Seriola_lalandi_dorsalis
ENSMODG00000008227	-	95	71.501	ENSSARG00000007747	SSB	100	69.211	Sorex_araneus
ENSMODG00000008227	-	100	75.540	ENSSPUG00000012112	SSB	100	74.820	Sphenodon_punctatus
ENSMODG00000008227	-	99	54.390	ENSSPAG00000005696	ssb	98	55.155	Stegastes_partitus
ENSMODG00000008227	-	98	67.654	ENSSSCG00000015938	SSB	95	66.667	Sus_scrofa
ENSMODG00000008227	-	100	68.974	ENSTGUG00000007942	SSB	100	71.599	Taeniopygia_guttata
ENSMODG00000008227	-	99	54.988	ENSTRUG00000017839	ssb	93	54.688	Takifugu_rubripes
ENSMODG00000008227	-	91	56.085	ENSTNIG00000000915	ssb	100	54.545	Tetraodon_nigroviridis
ENSMODG00000008227	-	83	84.348	ENSTBEG00000009056	SSB	82	84.348	Tupaia_belangeri
ENSMODG00000008227	-	100	78.125	ENSTTRG00000002152	SSB	100	74.217	Tursiops_truncatus
ENSMODG00000008227	-	93	80.260	ENSUAMG00000027833	SSB	99	79.481	Ursus_americanus
ENSMODG00000008227	-	100	79.087	ENSUMAG00000013907	SSB	100	78.125	Ursus_maritimus
ENSMODG00000008227	-	100	79.075	ENSVPAG00000007183	SSB	100	77.913	Vicugna_pacos
ENSMODG00000008227	-	100	78.846	ENSVVUG00000016573	SSB	78	77.644	Vulpes_vulpes
ENSMODG00000008227	-	100	55.479	ENSXETG00000025402	ssb	100	55.708	Xenopus_tropicalis
ENSMODG00000008227	-	93	55.026	ENSXCOG00000019109	ssb	98	55.026	Xiphophorus_couchianus
ENSMODG00000008227	-	99	53.623	ENSXMAG00000004888	ssb	93	55.469	Xiphophorus_maculatus