EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000008490 (Gene tree)
Gene ID: 100016062
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 15214 bases
Position: chr8:13097778-13112991
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000010555	DUF382	PF04037.13	7.9e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000010761	-	3223	-	ENSMODP00000010555	816 (aa)	-	F7G448

Gene Model

Click here to download ENSMODG00000008490's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000008490's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000008490	-	78	90.610	ENSMODG00000025020	-	100	89.671

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000008490	-	92	93.369	ENSG00000087365	SF3B2	99	99.683	Homo_sapiens
ENSMODG00000008490	-	91	73.394	ENSAPOG00000001974	sf3b2	82	72.838	Acanthochromis_polyacanthus
ENSMODG00000008490	-	92	92.529	ENSAMEG00000017206	SF3B2	87	92.179	Ailuropoda_melanoleuca
ENSMODG00000008490	-	93	73.609	ENSACIG00000000624	sf3b2	73	81.094	Amphilophus_citrinellus
ENSMODG00000008490	-	93	73.919	ENSAOCG00000009207	sf3b2	86	73.403	Amphiprion_ocellaris
ENSMODG00000008490	-	93	72.440	ENSAPEG00000002762	sf3b2	84	73.272	Amphiprion_percula
ENSMODG00000008490	-	96	68.362	ENSACAG00000008615	SF3B2	85	68.387	Anolis_carolinensis
ENSMODG00000008490	-	92	93.103	ENSANAG00000029120	SF3B2	85	91.258	Aotus_nancymaae
ENSMODG00000008490	-	93	72.809	ENSACLG00000014771	sf3b2	87	73.788	Astatotilapia_calliptera
ENSMODG00000008490	-	91	71.447	ENSAMXG00000007929	sf3b2	86	76.682	Astyanax_mexicanus
ENSMODG00000008490	-	92	92.126	ENSBTAG00000002778	SF3B2	86	91.784	Bos_taurus
ENSMODG00000008490	-	67	50.967	WBGene00021004	sftb-2	91	50.712	Caenorhabditis_elegans
ENSMODG00000008490	-	92	93.236	ENSCJAG00000001656	SF3B2	85	91.391	Callithrix_jacchus
ENSMODG00000008490	-	92	92.782	ENSCAFG00000013033	SF3B2	87	92.426	Canis_familiaris
ENSMODG00000008490	-	92	92.782	ENSCAFG00020015382	SF3B2	87	92.426	Canis_lupus_dingo
ENSMODG00000008490	-	92	91.995	ENSCHIG00000011211	SF3B2	87	91.656	Capra_hircus
ENSMODG00000008490	-	92	93.369	ENSTSYG00000000959	SF3B2	85	91.523	Carlito_syrichta
ENSMODG00000008490	-	63	80.519	ENSCAPG00000006065	SF3B2	88	100.000	Cavia_aperea
ENSMODG00000008490	-	82	91.815	ENSCPOG00000008294	SF3B2	83	89.747	Cavia_porcellus
ENSMODG00000008490	-	92	93.236	ENSCCAG00000035256	SF3B2	85	91.391	Cebus_capucinus
ENSMODG00000008490	-	92	93.369	ENSCATG00000042240	SF3B2	88	90.352	Cercocebus_atys
ENSMODG00000008490	-	92	92.838	ENSCLAG00000016852	SF3B2	85	90.993	Chinchilla_lanigera
ENSMODG00000008490	-	92	92.167	ENSCSAG00000008121	SF3B2	85	90.352	Chlorocebus_sabaeus
ENSMODG00000008490	-	85	99.485	ENSCHOG00000001476	SF3B2	79	91.237	Choloepus_hoffmanni
ENSMODG00000008490	-	92	83.933	ENSCPBG00000022465	SF3B2	88	88.665	Chrysemys_picta_bellii
ENSMODG00000008490	-	80	60.061	ENSCING00000005665	-	84	66.792	Ciona_intestinalis
ENSMODG00000008490	-	67	66.241	ENSCSAVG00000002029	-	85	65.328	Ciona_savignyi
ENSMODG00000008490	-	92	93.369	ENSCANG00000039680	SF3B2	85	91.523	Colobus_angolensis_palliatus
ENSMODG00000008490	-	92	93.103	ENSCGRG00001015741	Sf3b2	85	91.258	Cricetulus_griseus_chok1gshd
ENSMODG00000008490	-	92	93.103	ENSCGRG00000018110	Sf3b2	88	91.258	Cricetulus_griseus_crigri
ENSMODG00000008490	-	91	75.000	ENSCVAG00000003357	sf3b2	85	74.734	Cyprinodon_variegatus
ENSMODG00000008490	-	88	74.145	ENSDARG00000018049	sf3b2	86	74.521	Danio_rerio
ENSMODG00000008490	-	92	92.810	ENSDNOG00000009484	SF3B2	95	92.699	Dasypus_novemcinctus
ENSMODG00000008490	-	92	92.706	ENSDORG00000002495	Sf3b2	85	91.258	Dipodomys_ordii
ENSMODG00000008490	-	75	88.889	ENSETEG00000020284	SF3B2	70	88.889	Echinops_telfairi
ENSMODG00000008490	-	65	78.947	ENSEBUG00000013703	sf3b2	87	62.926	Eptatretus_burgeri
ENSMODG00000008490	-	92	92.398	ENSEASG00005004508	SF3B2	87	92.051	Equus_asinus_asinus
ENSMODG00000008490	-	92	92.398	ENSECAG00000024461	SF3B2	87	92.051	Equus_caballus
ENSMODG00000008490	-	59	100.000	ENSEEUG00000014278	-	53	100.000	Erinaceus_europaeus
ENSMODG00000008490	-	95	70.551	ENSELUG00000005586	sf3b2	84	73.369	Esox_lucius
ENSMODG00000008490	-	92	93.867	ENSFCAG00000013289	SF3B2	86	93.481	Felis_catus
ENSMODG00000008490	-	86	69.803	ENSFALG00000014653	SF3B2	89	73.053	Ficedula_albicollis
ENSMODG00000008490	-	92	91.942	ENSFDAG00000019806	SF3B2	85	90.501	Fukomys_damarensis
ENSMODG00000008490	-	92	72.536	ENSFHEG00000020968	sf3b2	86	73.810	Fundulus_heteroclitus
ENSMODG00000008490	-	80	77.861	ENSGMOG00000012131	sf3b2	96	80.751	Gadus_morhua
ENSMODG00000008490	-	65	88.469	ENSGAFG00000001675	sf3b2	86	73.254	Gambusia_affinis
ENSMODG00000008490	-	80	79.173	ENSGACG00000019012	sf3b2	96	80.031	Gasterosteus_aculeatus
ENSMODG00000008490	-	92	87.220	ENSGAGG00000023916	SF3B2	86	86.957	Gopherus_agassizii
ENSMODG00000008490	-	92	93.209	ENSGGOG00000028448	SF3B2	84	99.717	Gorilla_gorilla
ENSMODG00000008490	-	93	72.938	ENSHBUG00000017349	sf3b2	87	73.788	Haplochromis_burtoni
ENSMODG00000008490	-	92	92.971	ENSHGLG00000010807	SF3B2	85	91.126	Heterocephalus_glaber_female
ENSMODG00000008490	-	92	92.971	ENSHGLG00100006361	SF3B2	85	91.126	Heterocephalus_glaber_male
ENSMODG00000008490	-	95	69.689	ENSHCOG00000016203	sf3b2	74	78.750	Hippocampus_comes
ENSMODG00000008490	-	89	70.628	ENSIPUG00000009383	sf3b2	83	72.033	Ictalurus_punctatus
ENSMODG00000008490	-	92	93.369	ENSSTOG00000028892	SF3B2	85	91.523	Ictidomys_tridecemlineatus
ENSMODG00000008490	-	92	92.470	ENSJJAG00000018193	Sf3b2	85	91.029	Jaculus_jaculus
ENSMODG00000008490	-	65	88.324	ENSKMAG00000020181	sf3b2	90	68.005	Kryptolebias_marmoratus
ENSMODG00000008490	-	93	74.548	ENSLBEG00000027739	sf3b2	89	79.316	Labrus_bergylta
ENSMODG00000008490	-	92	93.484	ENSLAFG00000002128	SF3B2	85	93.484	Loxodonta_africana
ENSMODG00000008490	-	92	93.245	ENSMFAG00000003064	SF3B2	88	90.234	Macaca_fascicularis
ENSMODG00000008490	-	92	88.549	ENSMMUG00000011743	SF3B2	85	86.037	Macaca_mulatta
ENSMODG00000008490	-	92	92.961	ENSMNEG00000034437	SF3B2	88	90.352	Macaca_nemestrina
ENSMODG00000008490	-	92	92.961	ENSMLEG00000029373	SF3B2	88	90.352	Mandrillus_leucophaeus
ENSMODG00000008490	-	91	74.805	ENSMAMG00000014103	sf3b2	86	73.575	Mastacembelus_armatus
ENSMODG00000008490	-	93	72.809	ENSMZEG00005020789	sf3b2	86	73.788	Maylandia_zebra
ENSMODG00000008490	-	54	98.333	ENSMAUG00000017040	Sf3b2	76	98.333	Mesocricetus_auratus
ENSMODG00000008490	-	92	93.369	ENSMICG00000008565	-	85	91.523	Microcebus_murinus
ENSMODG00000008490	-	99	85.502	ENSMICG00000016942	-	86	89.706	Microcebus_murinus
ENSMODG00000008490	-	92	92.706	ENSMOCG00000003136	Sf3b2	85	90.861	Microtus_ochrogaster
ENSMODG00000008490	-	93	71.009	ENSMMOG00000012928	sf3b2	86	71.410	Mola_mola
ENSMODG00000008490	-	92	92.573	MGP_CAROLIEiJ_G0022539	Sf3b2	85	90.728	Mus_caroli
ENSMODG00000008490	-	92	92.706	ENSMUSG00000024853	Sf3b2	85	90.861	Mus_musculus
ENSMODG00000008490	-	92	92.838	MGP_PahariEiJ_G0014036	Sf3b2	85	90.993	Mus_pahari
ENSMODG00000008490	-	92	92.573	MGP_SPRETEiJ_G0023453	Sf3b2	85	90.861	Mus_spretus
ENSMODG00000008490	-	92	92.913	ENSMPUG00000011349	SF3B2	87	92.555	Mustela_putorius_furo
ENSMODG00000008490	-	92	91.864	ENSMLUG00000011136	SF3B2	86	91.528	Myotis_lucifugus
ENSMODG00000008490	-	92	92.573	ENSNGAG00000012103	Sf3b2	85	90.861	Nannospalax_galili
ENSMODG00000008490	-	91	89.314	ENSNLEG00000006007	SF3B2	85	87.203	Nomascus_leucogenys
ENSMODG00000008490	-	85	93.466	ENSMEUG00000000019	SF3B2	82	93.466	Notamacropus_eugenii
ENSMODG00000008490	-	93	88.497	ENSODEG00000017764	SF3B2	85	86.755	Octodon_degus
ENSMODG00000008490	-	92	74.541	ENSONIG00000013068	sf3b2	86	74.416	Oreochromis_niloticus
ENSMODG00000008490	-	95	81.416	ENSOANG00000012482	SF3B2	99	82.101	Ornithorhynchus_anatinus
ENSMODG00000008490	-	67	59.484	ENSOCUG00000024154	-	95	61.748	Oryctolagus_cuniculus
ENSMODG00000008490	-	95	91.047	ENSOCUG00000015722	-	89	89.831	Oryctolagus_cuniculus
ENSMODG00000008490	-	96	71.036	ENSORLG00000008235	sf3b2	85	71.859	Oryzias_latipes
ENSMODG00000008490	-	96	71.036	ENSORLG00020005357	sf3b2	88	71.859	Oryzias_latipes_hni
ENSMODG00000008490	-	96	71.036	ENSORLG00015022454	sf3b2	82	78.268	Oryzias_latipes_hsok
ENSMODG00000008490	-	94	71.483	ENSOMEG00000017480	sf3b2	84	73.721	Oryzias_melastigma
ENSMODG00000008490	-	92	86.292	ENSOGAG00000005799	SF3B2	85	81.321	Otolemur_garnettii
ENSMODG00000008490	-	92	93.085	ENSOARG00000002125	SF3B2	99	91.973	Ovis_aries
ENSMODG00000008490	-	92	93.209	ENSPPAG00000007359	SF3B2	85	90.691	Pan_paniscus
ENSMODG00000008490	-	92	93.867	ENSPPRG00000013334	SF3B2	86	93.481	Panthera_pardus
ENSMODG00000008490	-	92	93.867	ENSPTIG00000015022	SF3B2	86	93.481	Panthera_tigris_altaica
ENSMODG00000008490	-	92	93.209	ENSPTRG00000003912	SF3B2	86	90.352	Pan_troglodytes
ENSMODG00000008490	-	92	93.369	ENSPANG00000008593	SF3B2	88	90.352	Papio_anubis
ENSMODG00000008490	-	93	72.532	ENSPKIG00000016576	sf3b2	86	80.915	Paramormyrops_kingsleyae
ENSMODG00000008490	-	95	86.044	ENSPSIG00000003158	SF3B2	98	87.054	Pelodiscus_sinensis
ENSMODG00000008490	-	81	82.584	ENSPMGG00000000819	sf3b2	87	66.710	Periophthalmus_magnuspinnatus
ENSMODG00000008490	-	93	80.000	ENSPEMG00000015451	-	91	79.365	Peromyscus_maniculatus_bairdii
ENSMODG00000008490	-	92	92.971	ENSPEMG00000015437	Sf3b2	85	91.126	Peromyscus_maniculatus_bairdii
ENSMODG00000008490	-	99	97.146	ENSPCIG00000008381	SF3B2	94	97.146	Phascolarctos_cinereus
ENSMODG00000008490	-	92	73.200	ENSPFOG00000002552	sf3b2	86	74.147	Poecilia_formosa
ENSMODG00000008490	-	65	88.469	ENSPLAG00000001471	sf3b2	86	74.278	Poecilia_latipinna
ENSMODG00000008490	-	92	73.026	ENSPMEG00000013180	sf3b2	86	74.113	Poecilia_mexicana
ENSMODG00000008490	-	65	88.280	ENSPREG00000002665	sf3b2	86	73.844	Poecilia_reticulata
ENSMODG00000008490	-	64	87.269	ENSPPYG00000003034	-	78	86.252	Pongo_abelii
ENSMODG00000008490	-	92	91.492	ENSPCAG00000005129	SF3B2	85	91.492	Procavia_capensis
ENSMODG00000008490	-	92	93.236	ENSPCOG00000025375	SF3B2	85	91.391	Propithecus_coquereli
ENSMODG00000008490	-	58	99.561	ENSPVAG00000005466	-	82	99.561	Pteropus_vampyrus
ENSMODG00000008490	-	87	73.684	ENSPNYG00000023594	sf3b2	92	73.961	Pundamilia_nyererei
ENSMODG00000008490	-	91	72.186	ENSPNAG00000001891	sf3b2	81	72.283	Pygocentrus_nattereri
ENSMODG00000008490	-	92	92.706	ENSRNOG00000020412	Sf3b2	85	90.861	Rattus_norvegicus
ENSMODG00000008490	-	92	93.369	ENSRBIG00000034065	SF3B2	85	91.523	Rhinopithecus_bieti
ENSMODG00000008490	-	92	93.369	ENSRROG00000034496	SF3B2	85	91.523	Rhinopithecus_roxellana
ENSMODG00000008490	-	95	90.452	ENSSBOG00000026337	SF3B2	87	89.147	Saimiri_boliviensis_boliviensis
ENSMODG00000008490	-	99	73.284	ENSSHAG00000018043	-	89	75.789	Sarcophilus_harrisii
ENSMODG00000008490	-	94	90.000	ENSSHAG00000010933	-	86	84.500	Sarcophilus_harrisii
ENSMODG00000008490	-	93	72.544	ENSSFOG00015021125	sf3b2	85	73.850	Scleropages_formosus
ENSMODG00000008490	-	64	87.856	ENSSMAG00000004079	sf3b2	88	72.833	Scophthalmus_maximus
ENSMODG00000008490	-	64	88.235	ENSSLDG00000006838	sf3b2	86	74.674	Seriola_lalandi_dorsalis
ENSMODG00000008490	-	57	99.206	ENSSARG00000003707	-	54	99.206	Sorex_araneus
ENSMODG00000008490	-	92	85.885	ENSSPUG00000009198	SF3B2	85	84.169	Sphenodon_punctatus
ENSMODG00000008490	-	93	71.517	ENSSPAG00000004406	sf3b2	86	73.155	Stegastes_partitus
ENSMODG00000008490	-	92	92.257	ENSSSCG00000012957	SF3B2	87	91.913	Sus_scrofa
ENSMODG00000008490	-	94	65.803	ENSTRUG00000007611	sf3b2	88	72.188	Takifugu_rubripes
ENSMODG00000008490	-	93	70.757	ENSTNIG00000007441	sf3b2	74	75.981	Tetraodon_nigroviridis
ENSMODG00000008490	-	87	83.426	ENSTBEG00000004258	SF3B2	73	99.286	Tupaia_belangeri
ENSMODG00000008490	-	92	92.782	ENSTTRG00000014339	SF3B2	87	92.426	Tursiops_truncatus
ENSMODG00000008490	-	92	90.301	ENSUAMG00000020754	SF3B2	84	90.857	Ursus_americanus
ENSMODG00000008490	-	92	92.651	ENSUMAG00000010994	SF3B2	87	92.298	Ursus_maritimus
ENSMODG00000008490	-	63	99.153	ENSVPAG00000008695	SF3B2	65	99.153	Vicugna_pacos
ENSMODG00000008490	-	92	92.651	ENSVVUG00000027029	SF3B2	87	92.298	Vulpes_vulpes
ENSMODG00000008490	-	95	71.046	ENSXETG00000008422	sf3b2	81	81.279	Xenopus_tropicalis
ENSMODG00000008490	-	78	77.883	ENSXCOG00000008943	sf3b2	84	77.883	Xiphophorus_couchianus
ENSMODG00000008490	-	65	88.091	ENSXMAG00000008467	sf3b2	86	72.739	Xiphophorus_maculatus