EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000008504 (Gene tree)
Gene ID: 100028786
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 116645 bases
Position: chr2:156040142-156156786
Accession: 100028786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000010573	SpoU_methylase	PF00588.19	5.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000010779	TARBP1-201	5048	-	ENSMODP00000010573	1646 (aa)	XP_007481659	F7FTF7

Gene Model

Click here to download ENSMODG00000008504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000008504's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000008504	TARBP1	100	72.563	ENSG00000059588	TARBP1	99	72.607	Homo_sapiens
ENSMODG00000008504	TARBP1	99	41.701	ENSAPOG00000016419	si:dkey-85a20.4	99	41.225	Acanthochromis_polyacanthus
ENSMODG00000008504	TARBP1	83	74.818	ENSAMEG00000003359	TARBP1	99	74.818	Ailuropoda_melanoleuca
ENSMODG00000008504	TARBP1	99	41.281	ENSATEG00000020266	si:dkey-85a20.4	99	41.257	Anabas_testudineus
ENSMODG00000008504	TARBP1	82	69.192	ENSAPLG00000007666	TARBP1	99	70.633	Anas_platyrhynchos
ENSMODG00000008504	TARBP1	99	58.379	ENSACAG00000001142	TARBP1	98	58.262	Anolis_carolinensis
ENSMODG00000008504	TARBP1	90	72.973	ENSANAG00000022031	TARBP1	99	66.908	Aotus_nancymaae
ENSMODG00000008504	TARBP1	93	78.782	ENSBTAG00000004517	TARBP1	99	78.782	Bos_taurus
ENSMODG00000008504	TARBP1	100	71.670	ENSCJAG00000018155	TARBP1	99	71.834	Callithrix_jacchus
ENSMODG00000008504	TARBP1	87	73.892	ENSCAFG00000011533	TARBP1	99	75.214	Canis_familiaris
ENSMODG00000008504	TARBP1	100	70.828	ENSCAFG00020027141	TARBP1	99	71.231	Canis_lupus_dingo
ENSMODG00000008504	TARBP1	99	70.937	ENSCHIG00000011437	TARBP1	99	71.567	Capra_hircus
ENSMODG00000008504	TARBP1	79	76.227	ENSTSYG00000010382	TARBP1	97	76.227	Carlito_syrichta
ENSMODG00000008504	TARBP1	77	62.053	ENSCAPG00000010831	TARBP1	99	62.364	Cavia_aperea
ENSMODG00000008504	TARBP1	99	66.324	ENSCPOG00000013995	TARBP1	99	66.203	Cavia_porcellus
ENSMODG00000008504	TARBP1	100	72.135	ENSCCAG00000037278	TARBP1	99	79.698	Cebus_capucinus
ENSMODG00000008504	TARBP1	100	72.678	ENSCATG00000011754	TARBP1	99	72.782	Cercocebus_atys
ENSMODG00000008504	TARBP1	79	71.199	ENSCLAG00000003655	TARBP1	96	71.199	Chinchilla_lanigera
ENSMODG00000008504	TARBP1	78	76.475	ENSCSAG00000010100	TARBP1	99	76.475	Chlorocebus_sabaeus
ENSMODG00000008504	TARBP1	95	64.997	ENSCPBG00000005587	TARBP1	99	64.997	Chrysemys_picta_bellii
ENSMODG00000008504	TARBP1	82	76.725	ENSCANG00000034343	TARBP1	99	76.725	Colobus_angolensis_palliatus
ENSMODG00000008504	TARBP1	99	64.506	ENSCGRG00001016690	Tarbp1	99	64.407	Cricetulus_griseus_chok1gshd
ENSMODG00000008504	TARBP1	87	67.264	ENSCGRG00000016893	Tarbp1	97	67.661	Cricetulus_griseus_crigri
ENSMODG00000008504	TARBP1	99	39.545	ENSCSEG00000005255	si:dkey-85a20.4	99	39.151	Cynoglossus_semilaevis
ENSMODG00000008504	TARBP1	99	40.865	ENSDARG00000079055	si:dkey-85a20.4	99	54.296	Danio_rerio
ENSMODG00000008504	TARBP1	100	73.453	ENSDNOG00000008637	TARBP1	99	73.453	Dasypus_novemcinctus
ENSMODG00000008504	TARBP1	78	66.795	ENSDORG00000007984	Tarbp1	100	66.872	Dipodomys_ordii
ENSMODG00000008504	TARBP1	100	72.952	ENSEASG00005000252	TARBP1	99	72.892	Equus_asinus_asinus
ENSMODG00000008504	TARBP1	98	76.948	ENSECAG00000023673	TARBP1	99	76.948	Equus_caballus
ENSMODG00000008504	TARBP1	89	42.622	ENSELUG00000012193	si:dkey-85a20.4	86	44.170	Esox_lucius
ENSMODG00000008504	TARBP1	100	69.777	ENSFCAG00000014183	TARBP1	99	69.681	Felis_catus
ENSMODG00000008504	TARBP1	79	69.699	ENSFALG00000013565	TARBP1	99	69.709	Ficedula_albicollis
ENSMODG00000008504	TARBP1	78	68.497	ENSFDAG00000001308	TARBP1	99	68.574	Fukomys_damarensis
ENSMODG00000008504	TARBP1	94	55.271	ENSFHEG00000007565	si:dkey-85a20.4	93	55.775	Fundulus_heteroclitus
ENSMODG00000008504	TARBP1	82	42.680	ENSGMOG00000004549	si:dkey-85a20.4	98	42.753	Gadus_morhua
ENSMODG00000008504	TARBP1	100	59.590	ENSGALG00000011000	TARBP1	100	60.072	Gallus_gallus
ENSMODG00000008504	TARBP1	99	40.716	ENSGAFG00000007387	si:dkey-85a20.4	85	44.011	Gambusia_affinis
ENSMODG00000008504	TARBP1	84	44.170	ENSGACG00000005865	si:dkey-85a20.4	99	44.170	Gasterosteus_aculeatus
ENSMODG00000008504	TARBP1	91	73.338	ENSGAGG00000012102	TARBP1	99	72.507	Gopherus_agassizii
ENSMODG00000008504	TARBP1	83	73.926	ENSGGOG00000022879	TARBP1	99	73.926	Gorilla_gorilla
ENSMODG00000008504	TARBP1	93	43.219	ENSHBUG00000008877	si:dkey-85a20.4	83	46.304	Haplochromis_burtoni
ENSMODG00000008504	TARBP1	99	67.291	ENSHGLG00000011592	TARBP1	99	67.170	Heterocephalus_glaber_female
ENSMODG00000008504	TARBP1	95	69.327	ENSHGLG00100015169	TARBP1	99	71.007	Heterocephalus_glaber_male
ENSMODG00000008504	TARBP1	99	39.401	ENSIPUG00000005249	si:dkey-85a20.4	82	42.920	Ictalurus_punctatus
ENSMODG00000008504	TARBP1	85	68.871	ENSSTOG00000032291	TARBP1	99	68.945	Ictidomys_tridecemlineatus
ENSMODG00000008504	TARBP1	90	65.447	ENSJJAG00000017840	Tarbp1	99	65.474	Jaculus_jaculus
ENSMODG00000008504	TARBP1	80	48.193	ENSKMAG00000017546	si:dkey-85a20.4	84	48.322	Kryptolebias_marmoratus
ENSMODG00000008504	TARBP1	64	50.000	ENSLBEG00000012132	si:dkey-85a20.4	77	50.000	Labrus_bergylta
ENSMODG00000008504	TARBP1	99	51.528	ENSLACG00000004337	TARBP1	99	51.408	Latimeria_chalumnae
ENSMODG00000008504	TARBP1	99	46.399	ENSLOCG00000016214	si:dkey-85a20.4	85	50.567	Lepisosteus_oculatus
ENSMODG00000008504	TARBP1	96	72.847	ENSLAFG00000011394	TARBP1	99	72.784	Loxodonta_africana
ENSMODG00000008504	TARBP1	100	70.265	ENSMFAG00000041068	TARBP1	99	70.265	Macaca_fascicularis
ENSMODG00000008504	TARBP1	100	70.698	ENSMMUG00000021703	TARBP1	99	70.801	Macaca_mulatta
ENSMODG00000008504	TARBP1	100	72.574	ENSMNEG00000045002	TARBP1	99	72.618	Macaca_nemestrina
ENSMODG00000008504	TARBP1	82	76.640	ENSMLEG00000044182	TARBP1	99	76.640	Mandrillus_leucophaeus
ENSMODG00000008504	TARBP1	92	43.922	ENSMAMG00000021760	si:dkey-85a20.4	93	43.725	Mastacembelus_armatus
ENSMODG00000008504	TARBP1	93	43.283	ENSMZEG00005005751	si:dkey-85a20.4	83	46.304	Maylandia_zebra
ENSMODG00000008504	TARBP1	99	63.625	ENSMAUG00000020968	Tarbp1	99	63.565	Mesocricetus_auratus
ENSMODG00000008504	TARBP1	99	64.699	ENSMICG00000015280	TARBP1	99	64.940	Microcebus_murinus
ENSMODG00000008504	TARBP1	99	63.879	ENSMOCG00000004128	Tarbp1	99	63.923	Microtus_ochrogaster
ENSMODG00000008504	TARBP1	99	40.191	ENSMMOG00000007795	si:dkey-85a20.4	99	40.334	Mola_mola
ENSMODG00000008504	TARBP1	83	44.604	ENSMALG00000002916	si:dkey-85a20.4	85	44.604	Monopterus_albus
ENSMODG00000008504	TARBP1	99	63.818	MGP_CAROLIEiJ_G0031729	Tarbp1	99	63.801	Mus_caroli
ENSMODG00000008504	TARBP1	99	63.576	ENSMUSG00000090290	Tarbp1	99	63.559	Mus_musculus
ENSMODG00000008504	TARBP1	99	64.126	MGP_PahariEiJ_G0023326	Tarbp1	99	64.109	Mus_pahari
ENSMODG00000008504	TARBP1	99	63.576	MGP_SPRETEiJ_G0032846	Tarbp1	99	63.559	Mus_spretus
ENSMODG00000008504	TARBP1	75	74.494	ENSMPUG00000002802	TARBP1	99	74.494	Mustela_putorius_furo
ENSMODG00000008504	TARBP1	82	67.686	ENSMLUG00000002414	TARBP1	99	68.149	Myotis_lucifugus
ENSMODG00000008504	TARBP1	100	72.694	ENSNLEG00000002518	TARBP1	99	72.738	Nomascus_leucogenys
ENSMODG00000008504	TARBP1	70	93.750	ENSMEUG00000011370	-	69	93.750	Notamacropus_eugenii
ENSMODG00000008504	TARBP1	70	77.371	ENSOPRG00000013822	TARBP1	70	77.365	Ochotona_princeps
ENSMODG00000008504	TARBP1	95	68.170	ENSODEG00000005238	TARBP1	99	68.078	Octodon_degus
ENSMODG00000008504	TARBP1	82	45.921	ENSONIG00000009789	si:dkey-85a20.4	99	45.391	Oreochromis_niloticus
ENSMODG00000008504	TARBP1	99	71.782	ENSOCUG00000017418	TARBP1	99	71.722	Oryctolagus_cuniculus
ENSMODG00000008504	TARBP1	99	40.178	ENSORLG00000010529	si:dkey-85a20.4	85	43.312	Oryzias_latipes
ENSMODG00000008504	TARBP1	99	40.273	ENSORLG00020019264	si:dkey-85a20.4	85	43.241	Oryzias_latipes_hni
ENSMODG00000008504	TARBP1	99	40.202	ENSORLG00015003276	si:dkey-85a20.4	85	43.232	Oryzias_latipes_hsok
ENSMODG00000008504	TARBP1	100	69.783	ENSOGAG00000002379	TARBP1	100	69.723	Otolemur_garnettii
ENSMODG00000008504	TARBP1	90	72.917	ENSOARG00000003434	TARBP1	99	73.130	Ovis_aries
ENSMODG00000008504	TARBP1	82	76.777	ENSPPAG00000028097	TARBP1	99	76.850	Pan_paniscus
ENSMODG00000008504	TARBP1	95	72.708	ENSPPRG00000013561	TARBP1	98	77.751	Panthera_pardus
ENSMODG00000008504	TARBP1	81	76.247	ENSPTIG00000009281	TARBP1	99	76.247	Panthera_tigris_altaica
ENSMODG00000008504	TARBP1	100	72.574	ENSPTRG00000002124	TARBP1	99	72.634	Pan_troglodytes
ENSMODG00000008504	TARBP1	100	72.678	ENSPANG00000021933	TARBP1	99	72.618	Papio_anubis
ENSMODG00000008504	TARBP1	99	42.087	ENSPKIG00000016716	si:dkey-85a20.4	82	46.483	Paramormyrops_kingsleyae
ENSMODG00000008504	TARBP1	78	73.011	ENSPSIG00000010699	TARBP1	100	73.011	Pelodiscus_sinensis
ENSMODG00000008504	TARBP1	96	66.736	ENSPEMG00000006888	Tarbp1	99	67.132	Peromyscus_maniculatus_bairdii
ENSMODG00000008504	TARBP1	92	95.146	ENSPCIG00000029710	TARBP1	99	95.146	Phascolarctos_cinereus
ENSMODG00000008504	TARBP1	84	43.949	ENSPFOG00000013020	si:dkey-85a20.4	99	43.949	Poecilia_formosa
ENSMODG00000008504	TARBP1	99	40.906	ENSPLAG00000006044	si:dkey-85a20.4	85	44.051	Poecilia_latipinna
ENSMODG00000008504	TARBP1	99	40.906	ENSPMEG00000017857	si:dkey-85a20.4	85	44.051	Poecilia_mexicana
ENSMODG00000008504	TARBP1	99	41.082	ENSPREG00000022753	si:dkey-85a20.4	85	44.319	Poecilia_reticulata
ENSMODG00000008504	TARBP1	91	75.878	ENSPPYG00000000102	TARBP1	99	75.968	Pongo_abelii
ENSMODG00000008504	TARBP1	85	88.000	ENSPCAG00000004808	TARBP1	85	88.000	Procavia_capensis
ENSMODG00000008504	TARBP1	99	70.048	ENSPCOG00000005666	TARBP1	99	70.109	Propithecus_coquereli
ENSMODG00000008504	TARBP1	99	59.041	ENSPVAG00000014798	TARBP1	99	59.041	Pteropus_vampyrus
ENSMODG00000008504	TARBP1	94	42.584	ENSPNYG00000019135	si:dkey-85a20.4	83	45.521	Pundamilia_nyererei
ENSMODG00000008504	TARBP1	99	60.242	ENSRNOG00000053574	Tarbp1	99	59.927	Rattus_norvegicus
ENSMODG00000008504	TARBP1	89	69.184	ENSRBIG00000043362	TARBP1	97	69.827	Rhinopithecus_bieti
ENSMODG00000008504	TARBP1	93	74.879	ENSRROG00000029527	TARBP1	99	74.879	Rhinopithecus_roxellana
ENSMODG00000008504	TARBP1	86	76.310	ENSSBOG00000034503	TARBP1	99	76.458	Saimiri_boliviensis_boliviensis
ENSMODG00000008504	TARBP1	82	88.996	ENSSHAG00000000013	TARBP1	99	88.996	Sarcophilus_harrisii
ENSMODG00000008504	TARBP1	82	46.642	ENSSFOG00015002660	si:dkey-85a20.4	98	46.919	Scleropages_formosus
ENSMODG00000008504	TARBP1	90	43.475	ENSSMAG00000007081	si:dkey-85a20.4	82	45.415	Scophthalmus_maximus
ENSMODG00000008504	TARBP1	99	40.955	ENSSDUG00000023566	si:dkey-85a20.4	99	40.456	Seriola_dumerili
ENSMODG00000008504	TARBP1	99	42.239	ENSSLDG00000020200	si:dkey-85a20.4	86	45.474	Seriola_lalandi_dorsalis
ENSMODG00000008504	TARBP1	89	81.713	ENSSARG00000012207	TARBP1	89	81.713	Sorex_araneus
ENSMODG00000008504	TARBP1	100	64.101	ENSSPUG00000015364	TARBP1	100	63.964	Sphenodon_punctatus
ENSMODG00000008504	TARBP1	99	41.478	ENSSPAG00000007213	si:dkey-85a20.4	85	44.594	Stegastes_partitus
ENSMODG00000008504	TARBP1	99	72.286	ENSSSCG00000010160	TARBP1	99	74.910	Sus_scrofa
ENSMODG00000008504	TARBP1	79	69.343	ENSTGUG00000010214	TARBP1	100	69.419	Taeniopygia_guttata
ENSMODG00000008504	TARBP1	93	40.255	ENSTNIG00000016586	si:dkey-85a20.4	99	44.760	Tetraodon_nigroviridis
ENSMODG00000008504	TARBP1	91	72.451	ENSTTRG00000008707	TARBP1	95	72.603	Tursiops_truncatus
ENSMODG00000008504	TARBP1	80	74.322	ENSUMAG00000006730	TARBP1	99	74.322	Ursus_maritimus
ENSMODG00000008504	TARBP1	71	82.292	ENSVPAG00000007665	TARBP1	80	82.292	Vicugna_pacos
ENSMODG00000008504	TARBP1	83	75.615	ENSVVUG00000007460	TARBP1	99	77.323	Vulpes_vulpes
ENSMODG00000008504	TARBP1	82	56.674	ENSXETG00000016224	tarbp1	99	56.674	Xenopus_tropicalis
ENSMODG00000008504	TARBP1	77	49.046	ENSXCOG00000011779	si:dkey-85a20.4	93	49.183	Xiphophorus_couchianus
ENSMODG00000008504	TARBP1	63	42.951	ENSXMAG00000009600	si:dkey-85a20.4	100	42.951	Xiphophorus_maculatus