EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000009034 (Gene tree)
Gene ID: 100026945
Gene Symbol: LARP6
Alias: FLJ11196|acheron
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 17231 bases
Position: chr1:159254105-159271335
Accession: 100026945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000011262	La	PF05383.17	1.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000011480	LARP6-201	4647	-	ENSMODP00000011262	514 (aa)	XP_001377395	F7B2J2

Gene Model

Click here to download ENSMODG00000009034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000009034's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000009034	LARP6	94	74.120	ENSG00000166173	LARP6	100	77.419	Homo_sapiens
ENSMODG00000009034	LARP6	91	54.527	ENSAPOG00000021773	larp6a	63	56.532	Acanthochromis_polyacanthus
ENSMODG00000009034	LARP6	82	76.832	ENSAMEG00000008897	LARP6	99	76.832	Ailuropoda_melanoleuca
ENSMODG00000009034	LARP6	91	55.144	ENSACIG00000005166	larp6a	86	56.982	Amphilophus_citrinellus
ENSMODG00000009034	LARP6	98	52.408	ENSAOCG00000002284	larp6a	63	56.532	Amphiprion_ocellaris
ENSMODG00000009034	LARP6	91	54.527	ENSAPEG00000008077	larp6a	84	56.532	Amphiprion_percula
ENSMODG00000009034	LARP6	97	52.896	ENSATEG00000004018	larp6a	62	56.757	Anabas_testudineus
ENSMODG00000009034	LARP6	82	70.755	ENSAPLG00000009914	LARP6	99	70.755	Anas_platyrhynchos
ENSMODG00000009034	LARP6	80	67.067	ENSACAG00000008613	LARP6	98	67.067	Anolis_carolinensis
ENSMODG00000009034	LARP6	93	74.583	ENSANAG00000024860	LARP6	98	74.327	Aotus_nancymaae
ENSMODG00000009034	LARP6	95	53.861	ENSACLG00000018561	larp6a	61	57.207	Astatotilapia_calliptera
ENSMODG00000009034	LARP6	91	54.115	ENSAMXG00000029387	larp6a	68	55.727	Astyanax_mexicanus
ENSMODG00000009034	LARP6	81	40.714	ENSAMXG00000036816	-	95	40.618	Astyanax_mexicanus
ENSMODG00000009034	LARP6	93	74.792	ENSBTAG00000003915	LARP6	97	74.792	Bos_taurus
ENSMODG00000009034	LARP6	93	74.583	ENSCJAG00000018642	-	97	74.792	Callithrix_jacchus
ENSMODG00000009034	LARP6	93	74.583	ENSCJAG00000046236	-	97	74.375	Callithrix_jacchus
ENSMODG00000009034	LARP6	82	77.541	ENSCAFG00000017616	LARP6	99	77.541	Canis_familiaris
ENSMODG00000009034	LARP6	93	75.208	ENSCAFG00020007296	LARP6	97	75.417	Canis_lupus_dingo
ENSMODG00000009034	LARP6	93	74.792	ENSCHIG00000013742	LARP6	97	74.792	Capra_hircus
ENSMODG00000009034	LARP6	82	75.177	ENSTSYG00000028124	LARP6	86	75.177	Carlito_syrichta
ENSMODG00000009034	LARP6	83	76.941	ENSCAPG00000015452	LARP6	100	76.941	Cavia_aperea
ENSMODG00000009034	LARP6	96	73.441	ENSCPOG00000022687	LARP6	99	73.482	Cavia_porcellus
ENSMODG00000009034	LARP6	93	75.417	ENSCCAG00000036320	LARP6	97	75.625	Cebus_capucinus
ENSMODG00000009034	LARP6	93	74.167	ENSCATG00000042432	LARP6	98	73.913	Cercocebus_atys
ENSMODG00000009034	LARP6	96	75.354	ENSCLAG00000007893	LARP6	99	75.152	Chinchilla_lanigera
ENSMODG00000009034	LARP6	93	74.583	ENSCSAG00000013672	LARP6	97	74.792	Chlorocebus_sabaeus
ENSMODG00000009034	LARP6	93	74.739	ENSCHOG00000003318	LARP6	99	74.948	Choloepus_hoffmanni
ENSMODG00000009034	LARP6	85	69.954	ENSCPBG00000010771	LARP6	84	69.954	Chrysemys_picta_bellii
ENSMODG00000009034	LARP6	82	76.179	ENSCANG00000025833	LARP6	99	76.179	Colobus_angolensis_palliatus
ENSMODG00000009034	LARP6	93	74.268	ENSCGRG00001024472	Larp6	97	74.059	Cricetulus_griseus_chok1gshd
ENSMODG00000009034	LARP6	93	74.268	ENSCGRG00000004527	Larp6	97	74.059	Cricetulus_griseus_crigri
ENSMODG00000009034	LARP6	97	52.816	ENSCSEG00000011196	larp6a	65	56.433	Cynoglossus_semilaevis
ENSMODG00000009034	LARP6	83	56.629	ENSCVAG00000009605	larp6a	65	56.629	Cyprinodon_variegatus
ENSMODG00000009034	LARP6	92	54.357	ENSDARG00000005355	larp6a	96	58.392	Danio_rerio
ENSMODG00000009034	LARP6	93	74.948	ENSDNOG00000042993	LARP6	97	74.948	Dasypus_novemcinctus
ENSMODG00000009034	LARP6	94	69.897	ENSDORG00000023910	Larp6	98	69.691	Dipodomys_ordii
ENSMODG00000009034	LARP6	75	76.062	ENSETEG00000020390	LARP6	77	76.062	Echinops_telfairi
ENSMODG00000009034	LARP6	93	76.042	ENSEASG00005005490	LARP6	71	76.042	Equus_asinus_asinus
ENSMODG00000009034	LARP6	94	75.362	ENSECAG00000014190	LARP6	97	75.833	Equus_caballus
ENSMODG00000009034	LARP6	83	55.357	ENSELUG00000007341	larp6a	64	55.357	Esox_lucius
ENSMODG00000009034	LARP6	93	75.625	ENSFCAG00000001361	LARP6	97	75.625	Felis_catus
ENSMODG00000009034	LARP6	93	64.108	ENSFALG00000012389	LARP6	99	64.050	Ficedula_albicollis
ENSMODG00000009034	LARP6	89	74.123	ENSFDAG00000019994	LARP6	86	76.136	Fukomys_damarensis
ENSMODG00000009034	LARP6	91	55.031	ENSFHEG00000010312	larp6a	63	56.404	Fundulus_heteroclitus
ENSMODG00000009034	LARP6	85	68.934	ENSGALG00000004046	LARP6	89	68.934	Gallus_gallus
ENSMODG00000009034	LARP6	83	57.079	ENSGAFG00000009426	larp6a	65	56.854	Gambusia_affinis
ENSMODG00000009034	LARP6	80	56.977	ENSGACG00000014622	larp6a	97	56.977	Gasterosteus_aculeatus
ENSMODG00000009034	LARP6	85	66.366	ENSGAGG00000010802	LARP6	63	66.743	Gopherus_agassizii
ENSMODG00000009034	LARP6	82	76.179	ENSGGOG00000024151	LARP6	99	76.179	Gorilla_gorilla
ENSMODG00000009034	LARP6	95	53.861	ENSHBUG00000021014	larp6a	61	57.207	Haplochromis_burtoni
ENSMODG00000009034	LARP6	93	75.519	ENSHGLG00000015112	LARP6	97	75.519	Heterocephalus_glaber_female
ENSMODG00000009034	LARP6	82	78.487	ENSHGLG00100013159	LARP6	99	78.487	Heterocephalus_glaber_male
ENSMODG00000009034	LARP6	92	53.971	ENSHCOG00000001241	larp6a	84	56.306	Hippocampus_comes
ENSMODG00000009034	LARP6	83	55.506	ENSIPUG00000010187	larp6	67	56.152	Ictalurus_punctatus
ENSMODG00000009034	LARP6	81	38.242	ENSIPUG00000002828	-	96	38.278	Ictalurus_punctatus
ENSMODG00000009034	LARP6	91	75.427	ENSSTOG00000024279	LARP6	97	77.578	Ictidomys_tridecemlineatus
ENSMODG00000009034	LARP6	93	73.805	ENSJJAG00000011013	Larp6	98	73.750	Jaculus_jaculus
ENSMODG00000009034	LARP6	96	54.314	ENSKMAG00000001702	larp6a	60	57.207	Kryptolebias_marmoratus
ENSMODG00000009034	LARP6	91	52.675	ENSLBEG00000000170	larp6a	84	54.505	Labrus_bergylta
ENSMODG00000009034	LARP6	93	62.213	ENSLACG00000018706	LARP6	90	62.033	Latimeria_chalumnae
ENSMODG00000009034	LARP6	85	40.444	ENSLACG00000002786	-	98	42.523	Latimeria_chalumnae
ENSMODG00000009034	LARP6	91	57.557	ENSLOCG00000014592	larp6a	65	59.864	Lepisosteus_oculatus
ENSMODG00000009034	LARP6	81	45.035	ENSLOCG00000008547	-	83	44.548	Lepisosteus_oculatus
ENSMODG00000009034	LARP6	87	77.578	ENSLAFG00000016343	LARP6	99	77.578	Loxodonta_africana
ENSMODG00000009034	LARP6	87	76.837	ENSMFAG00000035507	LARP6	99	76.906	Macaca_fascicularis
ENSMODG00000009034	LARP6	87	76.837	ENSMMUG00000004429	LARP6	93	76.906	Macaca_mulatta
ENSMODG00000009034	LARP6	93	74.375	ENSMNEG00000045335	LARP6	97	74.583	Macaca_nemestrina
ENSMODG00000009034	LARP6	82	76.179	ENSMLEG00000038587	LARP6	99	76.179	Mandrillus_leucophaeus
ENSMODG00000009034	LARP6	91	54.733	ENSMAMG00000005261	larp6a	62	56.757	Mastacembelus_armatus
ENSMODG00000009034	LARP6	95	53.861	ENSMZEG00005005774	larp6a	61	57.207	Maylandia_zebra
ENSMODG00000009034	LARP6	82	69.976	ENSMGAG00000005077	LARP6	99	69.976	Meleagris_gallopavo
ENSMODG00000009034	LARP6	93	74.059	ENSMAUG00000018486	Larp6	97	73.849	Mesocricetus_auratus
ENSMODG00000009034	LARP6	93	74.322	ENSMICG00000011234	LARP6	97	74.322	Microcebus_murinus
ENSMODG00000009034	LARP6	93	73.333	ENSMOCG00000010492	Larp6	97	73.333	Microtus_ochrogaster
ENSMODG00000009034	LARP6	91	54.959	ENSMMOG00000016284	larp6a	85	57.014	Mola_mola
ENSMODG00000009034	LARP6	91	55.852	ENSMALG00000014439	larp6a	84	57.528	Monopterus_albus
ENSMODG00000009034	LARP6	93	74.792	MGP_CAROLIEiJ_G0032314	Larp6	97	74.583	Mus_caroli
ENSMODG00000009034	LARP6	93	74.127	ENSMUSG00000034839	Larp6	97	74.792	Mus_musculus
ENSMODG00000009034	LARP6	93	74.583	MGP_PahariEiJ_G0015180	Larp6	97	74.583	Mus_pahari
ENSMODG00000009034	LARP6	93	73.511	MGP_SPRETEiJ_G0033452	Larp6	97	74.167	Mus_spretus
ENSMODG00000009034	LARP6	82	77.305	ENSMPUG00000017086	LARP6	99	77.123	Mustela_putorius_furo
ENSMODG00000009034	LARP6	93	74.583	ENSMLUG00000010319	LARP6	97	74.583	Myotis_lucifugus
ENSMODG00000009034	LARP6	94	73.913	ENSNGAG00000014238	Larp6	98	73.913	Nannospalax_galili
ENSMODG00000009034	LARP6	95	53.465	ENSNBRG00000008120	larp6a	84	56.757	Neolamprologus_brichardi
ENSMODG00000009034	LARP6	93	74.583	ENSNLEG00000013691	LARP6	97	74.583	Nomascus_leucogenys
ENSMODG00000009034	LARP6	97	80.321	ENSMEUG00000002270	LARP6	100	80.321	Notamacropus_eugenii
ENSMODG00000009034	LARP6	68	68.091	ENSOPRG00000004868	-	99	68.000	Ochotona_princeps
ENSMODG00000009034	LARP6	95	73.824	ENSODEG00000015958	LARP6	98	73.006	Octodon_degus
ENSMODG00000009034	LARP6	96	53.565	ENSONIG00000002901	larp6a	86	56.388	Oreochromis_niloticus
ENSMODG00000009034	LARP6	83	70.353	ENSOCUG00000009306	LARP6	100	70.353	Oryctolagus_cuniculus
ENSMODG00000009034	LARP6	96	54.118	ENSORLG00000014256	larp6a	86	57.658	Oryzias_latipes
ENSMODG00000009034	LARP6	96	53.516	ENSORLG00020019657	larp6a	63	57.432	Oryzias_latipes_hni
ENSMODG00000009034	LARP6	96	53.922	ENSORLG00015017915	larp6a	63	57.658	Oryzias_latipes_hsok
ENSMODG00000009034	LARP6	96	53.516	ENSOMEG00000017049	larp6a	63	57.207	Oryzias_melastigma
ENSMODG00000009034	LARP6	93	73.125	ENSOGAG00000000522	LARP6	97	73.750	Otolemur_garnettii
ENSMODG00000009034	LARP6	84	76.047	ENSOARG00000018750	LARP6	99	76.047	Ovis_aries
ENSMODG00000009034	LARP6	82	76.179	ENSPPAG00000031247	LARP6	99	76.179	Pan_paniscus
ENSMODG00000009034	LARP6	93	75.833	ENSPPRG00000011282	LARP6	97	75.833	Panthera_pardus
ENSMODG00000009034	LARP6	82	77.123	ENSPTIG00000015318	LARP6	86	77.123	Panthera_tigris_altaica
ENSMODG00000009034	LARP6	94	74.120	ENSPTRG00000007234	LARP6	98	74.327	Pan_troglodytes
ENSMODG00000009034	LARP6	93	74.375	ENSPANG00000016362	LARP6	97	74.583	Papio_anubis
ENSMODG00000009034	LARP6	96	50.096	ENSPKIG00000004511	LARP6	66	54.945	Paramormyrops_kingsleyae
ENSMODG00000009034	LARP6	99	53.817	ENSPKIG00000020103	larp6a	86	57.582	Paramormyrops_kingsleyae
ENSMODG00000009034	LARP6	59	84.615	ENSPSIG00000009071	LARP6	91	84.615	Pelodiscus_sinensis
ENSMODG00000009034	LARP6	95	54.563	ENSPMGG00000006958	larp6a	86	57.883	Periophthalmus_magnuspinnatus
ENSMODG00000009034	LARP6	93	73.750	ENSPEMG00000012909	Larp6	97	73.849	Peromyscus_maniculatus_bairdii
ENSMODG00000009034	LARP6	100	93.981	ENSPCIG00000020765	LARP6	100	93.981	Phascolarctos_cinereus
ENSMODG00000009034	LARP6	98	53.030	ENSPFOG00000014175	larp6a	84	56.726	Poecilia_formosa
ENSMODG00000009034	LARP6	98	52.941	ENSPLAG00000011105	larp6a	62	56.629	Poecilia_latipinna
ENSMODG00000009034	LARP6	98	52.941	ENSPMEG00000011085	larp6a	63	56.629	Poecilia_mexicana
ENSMODG00000009034	LARP6	83	56.854	ENSPREG00000008067	larp6a	63	56.854	Poecilia_reticulata
ENSMODG00000009034	LARP6	93	74.375	ENSPPYG00000006604	LARP6	98	74.120	Pongo_abelii
ENSMODG00000009034	LARP6	62	83.234	ENSPCAG00000014197	LARP6	76	83.234	Procavia_capensis
ENSMODG00000009034	LARP6	93	74.583	ENSPCOG00000022934	LARP6	97	74.583	Propithecus_coquereli
ENSMODG00000009034	LARP6	94	74.534	ENSPVAG00000005618	LARP6	97	75.000	Pteropus_vampyrus
ENSMODG00000009034	LARP6	95	53.663	ENSPNYG00000009835	larp6a	84	56.982	Pundamilia_nyererei
ENSMODG00000009034	LARP6	93	54.049	ENSPNAG00000017966	larp6a	73	55.824	Pygocentrus_nattereri
ENSMODG00000009034	LARP6	93	74.333	ENSRNOG00000012438	Larp6	97	75.000	Rattus_norvegicus
ENSMODG00000009034	LARP6	94	71.577	ENSRBIG00000032902	LARP6	90	76.376	Rhinopithecus_bieti
ENSMODG00000009034	LARP6	93	74.375	ENSRROG00000043074	LARP6	97	74.583	Rhinopithecus_roxellana
ENSMODG00000009034	LARP6	82	76.651	ENSSBOG00000024190	LARP6	99	76.651	Saimiri_boliviensis_boliviensis
ENSMODG00000009034	LARP6	82	89.151	ENSSHAG00000018495	LARP6	99	88.208	Sarcophilus_harrisii
ENSMODG00000009034	LARP6	81	58.879	ENSSFOG00015023268	larp6a	83	59.028	Scleropages_formosus
ENSMODG00000009034	LARP6	91	51.660	ENSSFOG00015002254	LARP6	93	51.190	Scleropages_formosus
ENSMODG00000009034	LARP6	91	54.845	ENSSMAG00000009953	larp6a	62	56.659	Scophthalmus_maximus
ENSMODG00000009034	LARP6	91	54.733	ENSSDUG00000007438	larp6a	62	56.757	Seriola_dumerili
ENSMODG00000009034	LARP6	95	53.465	ENSSLDG00000016647	larp6a	62	56.757	Seriola_lalandi_dorsalis
ENSMODG00000009034	LARP6	82	69.668	ENSSPUG00000011312	LARP6	99	69.668	Sphenodon_punctatus
ENSMODG00000009034	LARP6	98	52.601	ENSSPAG00000020502	larp6a	62	56.532	Stegastes_partitus
ENSMODG00000009034	LARP6	93	75.208	ENSSSCG00000004974	LARP6	97	75.208	Sus_scrofa
ENSMODG00000009034	LARP6	82	68.794	ENSTGUG00000005808	LARP6	99	68.794	Taeniopygia_guttata
ENSMODG00000009034	LARP6	91	54.959	ENSTRUG00000003151	larp6a	65	57.143	Takifugu_rubripes
ENSMODG00000009034	LARP6	91	54.451	ENSTNIG00000011926	larp6a	88	56.009	Tetraodon_nigroviridis
ENSMODG00000009034	LARP6	82	75.177	ENSTBEG00000015077	LARP6	99	75.177	Tupaia_belangeri
ENSMODG00000009034	LARP6	93	70.378	ENSUAMG00000010467	LARP6	87	75.694	Ursus_americanus
ENSMODG00000009034	LARP6	89	74.286	ENSVVUG00000015227	LARP6	96	76.512	Vulpes_vulpes
ENSMODG00000009034	LARP6	93	65.631	ENSXETG00000020340	larp6	93	65.631	Xenopus_tropicalis
ENSMODG00000009034	LARP6	83	56.854	ENSXCOG00000012654	larp6a	89	56.854	Xiphophorus_couchianus
ENSMODG00000009034	LARP6	83	57.079	ENSXMAG00000021015	larp6a	60	57.079	Xiphophorus_maculatus