EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000009243 (Gene tree)
Gene ID: 100023276
Gene Symbol: DKC1
Alias: Cbf5|DKC|NAP57|NOLA4|XAP101|dyskerin
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 12690 bases
Position: chrX:3922570-3935259
Accession: 100023276
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000011539	TruB_N	PF01509.18	6e-21	1	1
ENSMODP00000011539	PUA	PF01472.20	3.5e-19	1	1
ENSMODP00000011539	DKCLD	PF08068.12	1.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000011759	DKC1-201	5954	-	ENSMODP00000011539	575 (aa)	XP_001374865	F7EDM7

Gene Model

Click here to download ENSMODG00000009243's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000009243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000009243	DKC1	78	85.903	ENSG00000130826	DKC1	99	92.195	Homo_sapiens
ENSMODG00000009243	DKC1	74	82.824	ENSAPOG00000007799	dkc1	82	82.824	Acanthochromis_polyacanthus
ENSMODG00000009243	DKC1	74	88.967	ENSAMEG00000002776	DKC1	84	88.967	Ailuropoda_melanoleuca
ENSMODG00000009243	DKC1	68	86.768	ENSACIG00000022614	dkc1	92	80.682	Amphilophus_citrinellus
ENSMODG00000009243	DKC1	74	82.824	ENSAOCG00000013159	dkc1	80	86.768	Amphiprion_ocellaris
ENSMODG00000009243	DKC1	74	82.824	ENSAPEG00000002284	dkc1	86	81.860	Amphiprion_percula
ENSMODG00000009243	DKC1	69	84.367	ENSATEG00000013682	dkc1	79	84.367	Anabas_testudineus
ENSMODG00000009243	DKC1	79	83.186	ENSACAG00000015600	DKC1	78	83.186	Anolis_carolinensis
ENSMODG00000009243	DKC1	78	85.683	ENSANAG00000022732	DKC1	88	85.683	Aotus_nancymaae
ENSMODG00000009243	DKC1	68	86.768	ENSACLG00000015605	dkc1	80	86.768	Astatotilapia_calliptera
ENSMODG00000009243	DKC1	80	75.705	ENSAMXG00000017108	dkc1	88	78.378	Astyanax_mexicanus
ENSMODG00000009243	DKC1	78	86.123	ENSBTAG00000013045	DKC1	90	86.123	Bos_taurus
ENSMODG00000009243	DKC1	71	65.356	WBGene00010478	K01G5.5	96	62.005	Caenorhabditis_elegans
ENSMODG00000009243	DKC1	78	85.903	ENSCJAG00000004210	DKC1	88	85.903	Callithrix_jacchus
ENSMODG00000009243	DKC1	75	88.345	ENSCAFG00000019620	-	83	88.345	Canis_familiaris
ENSMODG00000009243	DKC1	70	79.901	ENSCAFG00000009311	-	79	79.901	Canis_familiaris
ENSMODG00000009243	DKC1	75	88.345	ENSCAFG00020008918	-	83	88.345	Canis_lupus_dingo
ENSMODG00000009243	DKC1	74	75.701	ENSCAFG00020009379	-	81	75.701	Canis_lupus_dingo
ENSMODG00000009243	DKC1	78	86.564	ENSCHIG00000017392	DKC1	90	86.564	Capra_hircus
ENSMODG00000009243	DKC1	78	84.165	ENSTSYG00000007681	DKC1	85	84.876	Carlito_syrichta
ENSMODG00000009243	DKC1	65	91.755	ENSCAPG00000003342	DKC1	90	87.909	Cavia_aperea
ENSMODG00000009243	DKC1	78	86.123	ENSCPOG00000008825	DKC1	88	86.123	Cavia_porcellus
ENSMODG00000009243	DKC1	78	76.703	ENSCCAG00000027418	DKC1	87	76.703	Cebus_capucinus
ENSMODG00000009243	DKC1	78	85.683	ENSCATG00000033602	DKC1	88	85.683	Cercocebus_atys
ENSMODG00000009243	DKC1	75	87.327	ENSCLAG00000000720	DKC1	85	87.674	Chinchilla_lanigera
ENSMODG00000009243	DKC1	78	85.683	ENSCSAG00000006706	DKC1	88	85.683	Chlorocebus_sabaeus
ENSMODG00000009243	DKC1	70	90.323	ENSCPBG00000005858	DKC1	87	90.123	Chrysemys_picta_bellii
ENSMODG00000009243	DKC1	69	78.481	ENSCING00000004599	-	85	73.913	Ciona_intestinalis
ENSMODG00000009243	DKC1	68	78.974	ENSCSAVG00000010047	-	93	73.995	Ciona_savignyi
ENSMODG00000009243	DKC1	78	85.683	ENSCANG00000027987	DKC1	88	85.683	Colobus_angolensis_palliatus
ENSMODG00000009243	DKC1	78	85.903	ENSCGRG00001014574	-	88	85.903	Cricetulus_griseus_chok1gshd
ENSMODG00000009243	DKC1	68	69.466	ENSCGRG00001016789	-	78	72.207	Cricetulus_griseus_chok1gshd
ENSMODG00000009243	DKC1	78	85.903	ENSCGRG00000016075	-	88	85.903	Cricetulus_griseus_crigri
ENSMODG00000009243	DKC1	68	69.466	ENSCGRG00000014809	-	77	72.207	Cricetulus_griseus_crigri
ENSMODG00000009243	DKC1	70	85.149	ENSCSEG00000012633	dkc1	95	77.951	Cynoglossus_semilaevis
ENSMODG00000009243	DKC1	70	85.000	ENSCVAG00000010155	dkc1	78	84.788	Cyprinodon_variegatus
ENSMODG00000009243	DKC1	78	87.253	ENSDNOG00000004218	DKC1	89	87.253	Dasypus_novemcinctus
ENSMODG00000009243	DKC1	52	76.333	ENSDORG00000013566	-	100	76.333	Dipodomys_ordii
ENSMODG00000009243	DKC1	82	63.617	FBgn0259937	Nop60B	87	69.192	Drosophila_melanogaster
ENSMODG00000009243	DKC1	73	87.351	ENSETEG00000016095	DKC1	81	89.447	Echinops_telfairi
ENSMODG00000009243	DKC1	56	79.688	ENSEBUG00000015962	dkc1	99	80.546	Eptatretus_burgeri
ENSMODG00000009243	DKC1	75	88.811	ENSEASG00005007484	DKC1	83	88.811	Equus_asinus_asinus
ENSMODG00000009243	DKC1	75	88.811	ENSECAG00000023524	DKC1	83	88.811	Equus_caballus
ENSMODG00000009243	DKC1	69	88.917	ENSEEUG00000003323	DKC1	93	88.917	Erinaceus_europaeus
ENSMODG00000009243	DKC1	70	85.287	ENSELUG00000014538	dkc1	89	79.730	Esox_lucius
ENSMODG00000009243	DKC1	74	89.623	ENSFCAG00000006577	DKC1	90	85.903	Felis_catus
ENSMODG00000009243	DKC1	78	80.795	ENSFALG00000011496	DKC1	83	82.380	Ficedula_albicollis
ENSMODG00000009243	DKC1	74	87.972	ENSFDAG00000002516	DKC1	85	87.179	Fukomys_damarensis
ENSMODG00000009243	DKC1	74	82.033	ENSFHEG00000004627	dkc1	83	81.647	Fundulus_heteroclitus
ENSMODG00000009243	DKC1	68	83.120	ENSGMOG00000017277	dkc1	100	83.120	Gadus_morhua
ENSMODG00000009243	DKC1	75	84.028	ENSGALG00000005054	DKC1	84	84.028	Gallus_gallus
ENSMODG00000009243	DKC1	70	85.572	ENSGAFG00000011486	dkc1	69	85.536	Gambusia_affinis
ENSMODG00000009243	DKC1	68	86.514	ENSGACG00000004373	dkc1	96	88.146	Gasterosteus_aculeatus
ENSMODG00000009243	DKC1	75	86.946	ENSGAGG00000011330	DKC1	83	86.946	Gopherus_agassizii
ENSMODG00000009243	DKC1	78	85.903	ENSGGOG00000001045	DKC1	88	85.903	Gorilla_gorilla
ENSMODG00000009243	DKC1	69	85.965	ENSHBUG00000012436	dkc1	80	85.965	Haplochromis_burtoni
ENSMODG00000009243	DKC1	77	85.938	ENSHGLG00000000649	DKC1	88	85.463	Heterocephalus_glaber_female
ENSMODG00000009243	DKC1	73	87.915	ENSHGLG00100001153	DKC1	85	86.605	Heterocephalus_glaber_male
ENSMODG00000009243	DKC1	72	83.535	ENSHCOG00000021099	dkc1	82	83.535	Hippocampus_comes
ENSMODG00000009243	DKC1	69	85.464	ENSIPUG00000010309	dkc1	77	85.464	Ictalurus_punctatus
ENSMODG00000009243	DKC1	78	75.219	ENSSTOG00000011904	-	85	75.219	Ictidomys_tridecemlineatus
ENSMODG00000009243	DKC1	78	85.965	ENSSTOG00000001074	-	93	86.154	Ictidomys_tridecemlineatus
ENSMODG00000009243	DKC1	78	78.271	ENSSTOG00000020149	-	84	78.984	Ictidomys_tridecemlineatus
ENSMODG00000009243	DKC1	74	81.797	ENSKMAG00000008010	dkc1	84	81.075	Kryptolebias_marmoratus
ENSMODG00000009243	DKC1	70	85.750	ENSLBEG00000019122	dkc1	82	85.750	Labrus_bergylta
ENSMODG00000009243	DKC1	75	83.524	ENSLACG00000014025	DKC1	91	88.191	Latimeria_chalumnae
ENSMODG00000009243	DKC1	74	83.488	ENSLOCG00000013713	dkc1	85	85.096	Lepisosteus_oculatus
ENSMODG00000009243	DKC1	75	86.866	ENSLAFG00000000221	DKC1	84	87.067	Loxodonta_africana
ENSMODG00000009243	DKC1	78	85.463	ENSMFAG00000032398	DKC1	76	85.463	Macaca_fascicularis
ENSMODG00000009243	DKC1	78	85.683	ENSMMUG00000005768	DKC1	88	85.683	Macaca_mulatta
ENSMODG00000009243	DKC1	78	85.683	ENSMNEG00000034503	DKC1	88	85.683	Macaca_nemestrina
ENSMODG00000009243	DKC1	78	85.683	ENSMLEG00000034422	DKC1	88	85.683	Mandrillus_leucophaeus
ENSMODG00000009243	DKC1	71	85.258	ENSMAMG00000005427	dkc1	90	85.360	Mastacembelus_armatus
ENSMODG00000009243	DKC1	69	86.216	ENSMZEG00005014503	dkc1	80	86.216	Maylandia_zebra
ENSMODG00000009243	DKC1	69	85.533	ENSMGAG00000009238	DKC1	86	84.887	Meleagris_gallopavo
ENSMODG00000009243	DKC1	52	76.667	ENSMAUG00000016454	-	100	76.667	Mesocricetus_auratus
ENSMODG00000009243	DKC1	69	77.444	ENSMICG00000002818	-	99	79.396	Microcebus_murinus
ENSMODG00000009243	DKC1	75	87.879	ENSMICG00000038751	-	90	84.802	Microcebus_murinus
ENSMODG00000009243	DKC1	52	74.333	ENSMOCG00000001169	-	100	74.333	Microtus_ochrogaster
ENSMODG00000009243	DKC1	69	85.427	ENSMMOG00000020348	dkc1	87	85.427	Mola_mola
ENSMODG00000009243	DKC1	74	82.506	ENSMALG00000009454	dkc1	83	81.542	Monopterus_albus
ENSMODG00000009243	DKC1	78	75.108	MGP_CAROLIEiJ_G0033191	Dkc1	84	91.870	Mus_caroli
ENSMODG00000009243	DKC1	78	85.463	ENSMUSG00000031403	Dkc1	100	76.333	Mus_musculus
ENSMODG00000009243	DKC1	78	85.463	MGP_PahariEiJ_G0031735	Dkc1	100	76.333	Mus_pahari
ENSMODG00000009243	DKC1	78	85.463	MGP_SPRETEiJ_G0034351	Dkc1	100	76.333	Mus_spretus
ENSMODG00000009243	DKC1	78	83.621	ENSMPUG00000016136	DKC1	86	83.621	Mustela_putorius_furo
ENSMODG00000009243	DKC1	75	85.648	ENSMLUG00000011918	DKC1	83	85.648	Myotis_lucifugus
ENSMODG00000009243	DKC1	68	87.277	ENSNBRG00000005638	dkc1	79	87.277	Neolamprologus_brichardi
ENSMODG00000009243	DKC1	78	85.683	ENSNLEG00000014323	DKC1	88	85.683	Nomascus_leucogenys
ENSMODG00000009243	DKC1	74	92.453	ENSMEUG00000001066	DKC1	94	90.210	Notamacropus_eugenii
ENSMODG00000009243	DKC1	60	84.348	ENSOPRG00000005248	DKC1	69	84.348	Ochotona_princeps
ENSMODG00000009243	DKC1	52	76.667	ENSODEG00000000549	-	100	76.667	Octodon_degus
ENSMODG00000009243	DKC1	89	72.461	ENSONIG00000013889	dkc1	85	82.176	Oreochromis_niloticus
ENSMODG00000009243	DKC1	73	89.906	ENSOANG00000008713	-	88	89.906	Ornithorhynchus_anatinus
ENSMODG00000009243	DKC1	78	85.242	ENSOCUG00000012646	DKC1	84	86.916	Oryctolagus_cuniculus
ENSMODG00000009243	DKC1	68	85.678	ENSORLG00000018748	dkc1	78	85.025	Oryzias_latipes
ENSMODG00000009243	DKC1	70	83.871	ENSOMEG00000005786	dkc1	82	83.682	Oryzias_melastigma
ENSMODG00000009243	DKC1	78	84.301	ENSOGAG00000003399	DKC1	89	84.483	Otolemur_garnettii
ENSMODG00000009243	DKC1	75	87.298	ENSOARG00000003047	DKC1	86	87.298	Ovis_aries
ENSMODG00000009243	DKC1	77	86.384	ENSPPAG00000023820	DKC1	89	85.526	Pan_paniscus
ENSMODG00000009243	DKC1	74	89.623	ENSPPRG00000009104	DKC1	90	85.903	Panthera_pardus
ENSMODG00000009243	DKC1	69	91.228	ENSPTIG00000017469	DKC1	85	86.247	Panthera_tigris_altaica
ENSMODG00000009243	DKC1	78	85.903	ENSPTRG00000022449	DKC1	88	85.903	Pan_troglodytes
ENSMODG00000009243	DKC1	78	85.903	ENSPTRG00000043416	-	77	85.903	Pan_troglodytes
ENSMODG00000009243	DKC1	78	85.683	ENSPANG00000011978	DKC1	88	85.683	Papio_anubis
ENSMODG00000009243	DKC1	74	83.059	ENSPKIG00000008443	dkc1	89	81.149	Paramormyrops_kingsleyae
ENSMODG00000009243	DKC1	62	92.179	ENSPSIG00000013765	DKC1	86	92.179	Pelodiscus_sinensis
ENSMODG00000009243	DKC1	68	82.443	ENSPMGG00000004097	dkc1	72	82.443	Periophthalmus_magnuspinnatus
ENSMODG00000009243	DKC1	63	87.179	ENSPEMG00000013348	Dkc1	87	51.860	Peromyscus_maniculatus_bairdii
ENSMODG00000009243	DKC1	80	92.964	ENSPCIG00000016706	DKC1	79	93.603	Phascolarctos_cinereus
ENSMODG00000009243	DKC1	69	86.146	ENSPFOG00000018653	dkc1	80	85.714	Poecilia_formosa
ENSMODG00000009243	DKC1	69	86.146	ENSPLAG00000003272	dkc1	72	85.714	Poecilia_latipinna
ENSMODG00000009243	DKC1	69	86.146	ENSPMEG00000010413	dkc1	80	85.714	Poecilia_mexicana
ENSMODG00000009243	DKC1	74	82.783	ENSPREG00000004100	dkc1	83	82.394	Poecilia_reticulata
ENSMODG00000009243	DKC1	74	87.617	ENSPPYG00000020892	DKC1	85	86.836	Pongo_abelii
ENSMODG00000009243	DKC1	64	89.973	ENSPCAG00000015034	DKC1	72	89.973	Procavia_capensis
ENSMODG00000009243	DKC1	78	86.123	ENSPCOG00000026874	DKC1	88	86.123	Propithecus_coquereli
ENSMODG00000009243	DKC1	79	84.581	ENSPVAG00000009222	DKC1	85	86.946	Pteropus_vampyrus
ENSMODG00000009243	DKC1	68	86.768	ENSPNYG00000020063	dkc1	78	86.768	Pundamilia_nyererei
ENSMODG00000009243	DKC1	75	80.787	ENSPNAG00000005780	dkc1	80	84.788	Pygocentrus_nattereri
ENSMODG00000009243	DKC1	69	86.250	ENSRNOG00000055562	Dkc1	79	85.644	Rattus_norvegicus
ENSMODG00000009243	DKC1	78	85.683	ENSRBIG00000028457	DKC1	76	85.683	Rhinopithecus_bieti
ENSMODG00000009243	DKC1	78	85.683	ENSRROG00000044780	DKC1	88	85.683	Rhinopithecus_roxellana
ENSMODG00000009243	DKC1	67	69.713	YLR175W	-	79	69.713	Saccharomyces_cerevisiae
ENSMODG00000009243	DKC1	78	85.903	ENSSBOG00000033746	DKC1	88	85.903	Saimiri_boliviensis_boliviensis
ENSMODG00000009243	DKC1	78	95.333	ENSSHAG00000002463	DKC1	96	94.702	Sarcophilus_harrisii
ENSMODG00000009243	DKC1	69	86.398	ENSSFOG00015009585	dkc1	90	77.342	Scleropages_formosus
ENSMODG00000009243	DKC1	69	86.616	ENSSMAG00000002552	dkc1	86	81.733	Scophthalmus_maximus
ENSMODG00000009243	DKC1	74	83.924	ENSSDUG00000009963	dkc1	91	79.476	Seriola_dumerili
ENSMODG00000009243	DKC1	68	88.041	ENSSLDG00000019342	dkc1	92	81.490	Seriola_lalandi_dorsalis
ENSMODG00000009243	DKC1	70	85.500	ENSSARG00000001822	DKC1	86	81.481	Sorex_araneus
ENSMODG00000009243	DKC1	73	87.530	ENSSPUG00000018907	DKC1	84	83.747	Sphenodon_punctatus
ENSMODG00000009243	DKC1	68	87.277	ENSSPAG00000002585	dkc1	75	87.277	Stegastes_partitus
ENSMODG00000009243	DKC1	69	91.371	ENSSSCG00000012823	DKC1	85	89.630	Sus_scrofa
ENSMODG00000009243	DKC1	69	84.557	ENSTGUG00000006781	DKC1	90	82.921	Taeniopygia_guttata
ENSMODG00000009243	DKC1	75	82.028	ENSTRUG00000004413	dkc1	85	82.028	Takifugu_rubripes
ENSMODG00000009243	DKC1	74	66.820	ENSTNIG00000002582	dkc1	85	66.820	Tetraodon_nigroviridis
ENSMODG00000009243	DKC1	51	86.242	ENSTBEG00000011262	DKC1	85	84.740	Tupaia_belangeri
ENSMODG00000009243	DKC1	70	91.250	ENSUAMG00000022721	DKC1	84	91.250	Ursus_americanus
ENSMODG00000009243	DKC1	70	90.750	ENSUMAG00000016899	DKC1	98	88.089	Ursus_maritimus
ENSMODG00000009243	DKC1	71	74.384	ENSVVUG00000021671	-	75	74.384	Vulpes_vulpes
ENSMODG00000009243	DKC1	70	88.780	ENSVVUG00000020734	-	72	87.952	Vulpes_vulpes
ENSMODG00000009243	DKC1	71	85.854	ENSXETG00000032517	DKC1	89	81.111	Xenopus_tropicalis
ENSMODG00000009243	DKC1	74	82.547	ENSXCOG00000005498	dkc1	89	83.373	Xiphophorus_couchianus
ENSMODG00000009243	DKC1	69	86.146	ENSXMAG00000004919	dkc1	80	85.714	Xiphophorus_maculatus