EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000009745 (Gene tree)
Gene ID: 100031302
Gene Symbol: -
Alias: -
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 77216 bases
Position: chr5:268799430-268876645
Accession: 100031302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000012178	Suf	PF05843.14	2.2e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000012403	-	2202	-	ENSMODP00000012178	717 (aa)	XP_007497298	F6X9G6

Gene Model

Click here to download ENSMODG00000009745's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000009745's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000009745	-	100	84.658	ENSMODG00000025205	-	100	84.658

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000009745	-	100	98.745	ENSG00000176102	CSTF3	100	98.745	Homo_sapiens
ENSMODG00000009745	-	100	91.783	ENSAPOG00000014054	cstf3	100	91.783	Acanthochromis_polyacanthus
ENSMODG00000009745	-	99	98.731	ENSAMEG00000007187	CSTF3	98	98.731	Ailuropoda_melanoleuca
ENSMODG00000009745	-	87	86.240	ENSACIG00000005539	cstf3	100	86.240	Amphilophus_citrinellus
ENSMODG00000009745	-	100	91.504	ENSAOCG00000010930	cstf3	100	91.504	Amphiprion_ocellaris
ENSMODG00000009745	-	100	91.504	ENSAPEG00000007903	cstf3	100	91.504	Amphiprion_percula
ENSMODG00000009745	-	100	91.365	ENSATEG00000000190	cstf3	100	91.365	Anabas_testudineus
ENSMODG00000009745	-	99	97.740	ENSAPLG00000007217	CSTF3	100	97.740	Anas_platyrhynchos
ENSMODG00000009745	-	100	96.240	ENSACAG00000002823	CSTF3	100	96.240	Anolis_carolinensis
ENSMODG00000009745	-	100	98.745	ENSANAG00000020699	CSTF3	100	98.745	Aotus_nancymaae
ENSMODG00000009745	-	98	91.915	ENSACLG00000007820	cstf3	100	91.365	Astatotilapia_calliptera
ENSMODG00000009745	-	100	90.390	ENSAMXG00000014198	cstf3	100	90.669	Astyanax_mexicanus
ENSMODG00000009745	-	100	98.745	ENSBTAG00000008617	CSTF3	100	98.813	Bos_taurus
ENSMODG00000009745	-	97	49.038	WBGene00006307	suf-1	99	49.038	Caenorhabditis_elegans
ENSMODG00000009745	-	100	98.745	ENSCJAG00000005533	CSTF3	100	98.745	Callithrix_jacchus
ENSMODG00000009745	-	100	98.745	ENSCAFG00000007264	CSTF3	100	98.745	Canis_familiaris
ENSMODG00000009745	-	99	98.872	ENSCAFG00020002715	CSTF3	99	98.872	Canis_lupus_dingo
ENSMODG00000009745	-	98	97.297	ENSCHIG00000016418	CSTF3	100	98.720	Capra_hircus
ENSMODG00000009745	-	99	98.449	ENSTSYG00000000451	CSTF3	99	100.000	Carlito_syrichta
ENSMODG00000009745	-	83	92.045	ENSCAPG00000010958	CSTF3	98	92.045	Cavia_aperea
ENSMODG00000009745	-	100	98.745	ENSCPOG00000005545	CSTF3	100	98.745	Cavia_porcellus
ENSMODG00000009745	-	100	98.745	ENSCCAG00000024790	CSTF3	100	98.745	Cebus_capucinus
ENSMODG00000009745	-	100	98.745	ENSCATG00000007080	CSTF3	100	98.745	Cercocebus_atys
ENSMODG00000009745	-	100	98.745	ENSCLAG00000016179	CSTF3	100	98.745	Chinchilla_lanigera
ENSMODG00000009745	-	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSMODG00000009745	-	100	97.214	ENSCPBG00000006753	CSTF3	100	97.214	Chrysemys_picta_bellii
ENSMODG00000009745	-	99	62.657	ENSCING00000006401	-	98	62.657	Ciona_intestinalis
ENSMODG00000009745	-	98	61.925	ENSCSAVG00000004851	-	100	61.925	Ciona_savignyi
ENSMODG00000009745	-	100	98.745	ENSCANG00000035468	CSTF3	100	98.745	Colobus_angolensis_palliatus
ENSMODG00000009745	-	100	98.605	ENSCGRG00001014773	Cstf3	100	98.605	Cricetulus_griseus_chok1gshd
ENSMODG00000009745	-	100	98.605	ENSCGRG00000004142	Cstf3	100	98.605	Cricetulus_griseus_crigri
ENSMODG00000009745	-	100	91.492	ENSCSEG00000014283	cstf3	100	91.492	Cynoglossus_semilaevis
ENSMODG00000009745	-	100	90.390	ENSCVAG00000019739	cstf3	100	90.390	Cyprinodon_variegatus
ENSMODG00000009745	-	100	91.074	ENSDARG00000018904	cstf3	100	91.074	Danio_rerio
ENSMODG00000009745	-	99	97.899	ENSDNOG00000007366	CSTF3	99	97.899	Dasypus_novemcinctus
ENSMODG00000009745	-	99	90.973	ENSDORG00000005898	Cstf3	99	90.973	Dipodomys_ordii
ENSMODG00000009745	-	98	57.815	FBgn0003559	su(f)	98	57.815	Drosophila_melanogaster
ENSMODG00000009745	-	90	92.991	ENSETEG00000017097	CSTF3	90	92.991	Echinops_telfairi
ENSMODG00000009745	-	84	74.050	ENSEBUG00000015459	cstf3	96	73.884	Eptatretus_burgeri
ENSMODG00000009745	-	98	98.714	ENSEASG00005019884	CSTF3	100	98.714	Equus_asinus_asinus
ENSMODG00000009745	-	98	98.714	ENSECAG00000023338	CSTF3	100	98.714	Equus_caballus
ENSMODG00000009745	-	100	93.445	ENSEEUG00000015167	CSTF3	100	93.445	Erinaceus_europaeus
ENSMODG00000009745	-	100	89.819	ENSELUG00000023393	cstf3	100	89.819	Esox_lucius
ENSMODG00000009745	-	100	98.605	ENSFCAG00000030711	CSTF3	100	98.605	Felis_catus
ENSMODG00000009745	-	93	98.348	ENSFALG00000010764	CSTF3	100	96.313	Ficedula_albicollis
ENSMODG00000009745	-	100	98.605	ENSFDAG00000012082	CSTF3	100	98.605	Fukomys_damarensis
ENSMODG00000009745	-	100	90.529	ENSFHEG00000020623	cstf3	100	90.529	Fundulus_heteroclitus
ENSMODG00000009745	-	100	89.569	ENSGMOG00000012275	cstf3	100	89.569	Gadus_morhua
ENSMODG00000009745	-	100	97.354	ENSGALG00000011685	CSTF3	100	97.354	Gallus_gallus
ENSMODG00000009745	-	100	90.808	ENSGAFG00000002181	cstf3	100	90.808	Gambusia_affinis
ENSMODG00000009745	-	100	90.947	ENSGACG00000015997	cstf3	100	90.947	Gasterosteus_aculeatus
ENSMODG00000009745	-	100	97.075	ENSGAGG00000006200	CSTF3	100	97.075	Gopherus_agassizii
ENSMODG00000009745	-	99	92.948	ENSGGOG00000026591	CSTF3	99	92.948	Gorilla_gorilla
ENSMODG00000009745	-	98	91.915	ENSHBUG00000016656	cstf3	100	91.365	Haplochromis_burtoni
ENSMODG00000009745	-	100	98.466	ENSHGLG00000017834	CSTF3	100	98.466	Heterocephalus_glaber_female
ENSMODG00000009745	-	100	98.466	ENSHGLG00100018042	CSTF3	100	98.466	Heterocephalus_glaber_male
ENSMODG00000009745	-	98	89.093	ENSHCOG00000015218	cstf3	100	88.719	Hippocampus_comes
ENSMODG00000009745	-	100	90.098	ENSIPUG00000013170	CSTF3	100	90.098	Ictalurus_punctatus
ENSMODG00000009745	-	100	98.745	ENSSTOG00000013306	CSTF3	100	98.745	Ictidomys_tridecemlineatus
ENSMODG00000009745	-	99	86.611	ENSJJAG00000018430	Cstf3	99	86.611	Jaculus_jaculus
ENSMODG00000009745	-	100	89.972	ENSKMAG00000010916	cstf3	100	89.972	Kryptolebias_marmoratus
ENSMODG00000009745	-	100	90.669	ENSLBEG00000002306	cstf3	100	90.669	Labrus_bergylta
ENSMODG00000009745	-	100	93.445	ENSLACG00000017296	CSTF3	100	93.445	Latimeria_chalumnae
ENSMODG00000009745	-	100	92.887	ENSLOCG00000004415	cstf3	100	92.887	Lepisosteus_oculatus
ENSMODG00000009745	-	100	98.326	ENSLAFG00000008712	CSTF3	100	98.326	Loxodonta_africana
ENSMODG00000009745	-	100	98.745	ENSMFAG00000029516	CSTF3	100	98.745	Macaca_fascicularis
ENSMODG00000009745	-	100	98.745	ENSMMUG00000002542	CSTF3	100	98.745	Macaca_mulatta
ENSMODG00000009745	-	100	98.745	ENSMNEG00000021807	CSTF3	100	98.745	Macaca_nemestrina
ENSMODG00000009745	-	100	98.745	ENSMLEG00000039594	CSTF3	100	98.745	Mandrillus_leucophaeus
ENSMODG00000009745	-	100	91.365	ENSMAMG00000020423	cstf3	100	91.365	Mastacembelus_armatus
ENSMODG00000009745	-	98	91.915	ENSMZEG00005012082	cstf3	100	91.365	Maylandia_zebra
ENSMODG00000009745	-	100	97.493	ENSMGAG00000001383	CSTF3	100	97.493	Meleagris_gallopavo
ENSMODG00000009745	-	100	98.466	ENSMAUG00000002487	Cstf3	100	98.466	Mesocricetus_auratus
ENSMODG00000009745	-	100	98.466	ENSMICG00000004784	CSTF3	100	98.466	Microcebus_murinus
ENSMODG00000009745	-	100	98.605	ENSMOCG00000017583	Cstf3	100	98.605	Microtus_ochrogaster
ENSMODG00000009745	-	99	91.408	ENSMMOG00000016026	cstf3	95	91.408	Mola_mola
ENSMODG00000009745	-	100	91.226	ENSMALG00000012050	cstf3	100	91.226	Monopterus_albus
ENSMODG00000009745	-	100	98.605	MGP_CAROLIEiJ_G0024026	Cstf3	100	98.605	Mus_caroli
ENSMODG00000009745	-	100	98.605	ENSMUSG00000027176	Cstf3	100	98.605	Mus_musculus
ENSMODG00000009745	-	100	98.605	MGP_PahariEiJ_G0025464	Cstf3	100	98.605	Mus_pahari
ENSMODG00000009745	-	100	98.605	MGP_SPRETEiJ_G0024939	Cstf3	100	98.605	Mus_spretus
ENSMODG00000009745	-	100	98.605	ENSMPUG00000011457	CSTF3	100	98.605	Mustela_putorius_furo
ENSMODG00000009745	-	99	98.312	ENSMLUG00000003073	-	99	98.312	Myotis_lucifugus
ENSMODG00000009745	-	100	95.119	ENSMLUG00000026022	-	100	95.119	Myotis_lucifugus
ENSMODG00000009745	-	100	98.326	ENSNGAG00000010677	Cstf3	100	98.326	Nannospalax_galili
ENSMODG00000009745	-	87	91.200	ENSNBRG00000007345	cstf3	100	91.200	Neolamprologus_brichardi
ENSMODG00000009745	-	100	98.745	ENSNLEG00000017901	CSTF3	100	98.745	Nomascus_leucogenys
ENSMODG00000009745	-	73	95.220	ENSMEUG00000005640	-	100	95.220	Notamacropus_eugenii
ENSMODG00000009745	-	67	98.667	ENSOPRG00000000199	-	67	98.667	Ochotona_princeps
ENSMODG00000009745	-	100	98.466	ENSODEG00000016737	-	100	98.466	Octodon_degus
ENSMODG00000009745	-	89	86.006	ENSODEG00000006311	-	97	86.006	Octodon_degus
ENSMODG00000009745	-	98	91.915	ENSONIG00000005563	cstf3	100	91.365	Oreochromis_niloticus
ENSMODG00000009745	-	90	97.231	ENSOANG00000015140	CSTF3	100	97.231	Ornithorhynchus_anatinus
ENSMODG00000009745	-	100	98.326	ENSOCUG00000015417	CSTF3	100	98.326	Oryctolagus_cuniculus
ENSMODG00000009745	-	100	91.353	ENSORLG00000009762	cstf3	100	91.353	Oryzias_latipes
ENSMODG00000009745	-	100	91.353	ENSORLG00020005540	cstf3	100	91.353	Oryzias_latipes_hni
ENSMODG00000009745	-	100	91.213	ENSORLG00015003551	cstf3	100	91.213	Oryzias_latipes_hsok
ENSMODG00000009745	-	100	90.516	ENSOMEG00000003848	cstf3	100	90.516	Oryzias_melastigma
ENSMODG00000009745	-	100	98.333	ENSOGAG00000010229	CSTF3	100	98.333	Otolemur_garnettii
ENSMODG00000009745	-	90	98.600	ENSOARG00000017271	CSTF3	99	98.600	Ovis_aries
ENSMODG00000009745	-	99	95.346	ENSPPAG00000027358	CSTF3	99	95.346	Pan_paniscus
ENSMODG00000009745	-	100	98.605	ENSPPRG00000016852	CSTF3	100	98.605	Panthera_pardus
ENSMODG00000009745	-	100	98.605	ENSPTIG00000008716	CSTF3	100	98.605	Panthera_tigris_altaica
ENSMODG00000009745	-	100	98.745	ENSPTRG00000003485	CSTF3	100	98.745	Pan_troglodytes
ENSMODG00000009745	-	100	98.745	ENSPANG00000013722	CSTF3	100	98.745	Papio_anubis
ENSMODG00000009745	-	100	91.771	ENSPKIG00000023648	cstf3	100	91.771	Paramormyrops_kingsleyae
ENSMODG00000009745	-	100	96.797	ENSPSIG00000009173	CSTF3	100	96.797	Pelodiscus_sinensis
ENSMODG00000009745	-	76	94.881	ENSPMGG00000000164	cstf3	99	94.881	Periophthalmus_magnuspinnatus
ENSMODG00000009745	-	100	98.466	ENSPEMG00000011481	Cstf3	100	98.466	Peromyscus_maniculatus_bairdii
ENSMODG00000009745	-	99	80.028	ENSPMAG00000007282	cstf3	99	79.580	Petromyzon_marinus
ENSMODG00000009745	-	100	81.337	ENSPCIG00000030419	-	90	82.033	Phascolarctos_cinereus
ENSMODG00000009745	-	99	96.197	ENSPCIG00000026406	-	100	98.560	Phascolarctos_cinereus
ENSMODG00000009745	-	100	90.947	ENSPFOG00000017239	cstf3	100	90.947	Poecilia_formosa
ENSMODG00000009745	-	100	90.947	ENSPLAG00000009456	cstf3	100	90.947	Poecilia_latipinna
ENSMODG00000009745	-	100	90.947	ENSPMEG00000010320	cstf3	100	90.947	Poecilia_mexicana
ENSMODG00000009745	-	100	90.947	ENSPREG00000013549	cstf3	100	90.947	Poecilia_reticulata
ENSMODG00000009745	-	100	98.745	ENSPPYG00000003375	CSTF3	100	98.745	Pongo_abelii
ENSMODG00000009745	-	71	100.000	ENSPCAG00000008025	-	71	100.000	Procavia_capensis
ENSMODG00000009745	-	100	93.305	ENSPCOG00000014417	CSTF3	100	93.305	Propithecus_coquereli
ENSMODG00000009745	-	100	93.305	ENSPVAG00000002350	CSTF3	100	93.305	Pteropus_vampyrus
ENSMODG00000009745	-	98	91.915	ENSPNYG00000018259	cstf3	100	91.365	Pundamilia_nyererei
ENSMODG00000009745	-	100	91.771	ENSPNAG00000020182	cstf3	100	91.771	Pygocentrus_nattereri
ENSMODG00000009745	-	87	98.240	ENSRNOG00000012089	Cstf3	100	98.240	Rattus_norvegicus
ENSMODG00000009745	-	99	97.461	ENSRBIG00000044258	CSTF3	100	98.720	Rhinopithecus_bieti
ENSMODG00000009745	-	100	98.745	ENSRROG00000043450	CSTF3	100	98.745	Rhinopithecus_roxellana
ENSMODG00000009745	-	100	98.745	ENSSBOG00000024764	CSTF3	100	98.745	Saimiri_boliviensis_boliviensis
ENSMODG00000009745	-	100	98.745	ENSSHAG00000018128	-	100	98.745	Sarcophilus_harrisii
ENSMODG00000009745	-	100	86.053	ENSSHAG00000003135	-	99	86.053	Sarcophilus_harrisii
ENSMODG00000009745	-	100	92.050	ENSSFOG00015022133	cstf3	100	92.050	Scleropages_formosus
ENSMODG00000009745	-	100	90.669	ENSSMAG00000002197	cstf3	100	90.669	Scophthalmus_maximus
ENSMODG00000009745	-	100	91.504	ENSSDUG00000020426	cstf3	100	91.504	Seriola_dumerili
ENSMODG00000009745	-	100	91.643	ENSSLDG00000025649	cstf3	100	91.643	Seriola_lalandi_dorsalis
ENSMODG00000009745	-	100	98.326	ENSSARG00000000391	CSTF3	100	98.326	Sorex_araneus
ENSMODG00000009745	-	96	97.395	ENSSPUG00000010546	CSTF3	100	97.395	Sphenodon_punctatus
ENSMODG00000009745	-	100	91.643	ENSSPAG00000004958	cstf3	100	91.643	Stegastes_partitus
ENSMODG00000009745	-	99	98.184	ENSSSCG00000040954	CSTF3	100	98.184	Sus_scrofa
ENSMODG00000009745	-	99	97.175	ENSTGUG00000005010	CSTF3	100	97.175	Taeniopygia_guttata
ENSMODG00000009745	-	100	90.251	ENSTRUG00000004959	cstf3	100	90.251	Takifugu_rubripes
ENSMODG00000009745	-	99	90.986	ENSTNIG00000013811	cstf3	99	90.986	Tetraodon_nigroviridis
ENSMODG00000009745	-	90	95.327	ENSTBEG00000001544	CSTF3	90	95.327	Tupaia_belangeri
ENSMODG00000009745	-	100	95.676	ENSTTRG00000016366	CSTF3	100	95.676	Tursiops_truncatus
ENSMODG00000009745	-	99	98.590	ENSUMAG00000018971	CSTF3	100	98.400	Ursus_maritimus
ENSMODG00000009745	-	100	98.605	ENSVPAG00000007800	CSTF3	100	98.605	Vicugna_pacos
ENSMODG00000009745	-	99	98.872	ENSVVUG00000014938	CSTF3	100	98.720	Vulpes_vulpes
ENSMODG00000009745	-	67	43.416	ENSXETG00000017946	-	100	43.416	Xenopus_tropicalis
ENSMODG00000009745	-	88	78.594	ENSXETG00000021399	cstf3	100	79.773	Xenopus_tropicalis
ENSMODG00000009745	-	87	90.400	ENSXCOG00000011741	cstf3	100	90.400	Xiphophorus_couchianus
ENSMODG00000009745	-	100	90.947	ENSXMAG00000009545	cstf3	100	90.947	Xiphophorus_maculatus