EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000009826 (Gene tree)
Gene ID: 100020802
Gene Symbol: RPP40
Alias: RNASEP1|bA428J1.3
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 32118 bases
Position: chr3:340376589-340408706
Accession: 100020802
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000012300	Ribonuc_P_40	PF08584.11	4.5e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000012525	RPP40-201	4406	-	ENSMODP00000012300	364 (aa)	XP_001368045	F6WB80

Gene Model

Click here to download ENSMODG00000009826's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03008	Ribosome biogenesis in eukaryotes	KEGG
mdo03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000009826's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000009826	RPP40	100	80.495	ENSG00000124787	RPP40	100	80.495	Homo_sapiens
ENSMODG00000009826	RPP40	100	81.319	ENSAMEG00000012938	RPP40	100	81.319	Ailuropoda_melanoleuca
ENSMODG00000009826	RPP40	98	35.537	ENSACIG00000003617	rpp40	98	35.537	Amphilophus_citrinellus
ENSMODG00000009826	RPP40	98	36.872	ENSAOCG00000011846	rpp40	99	36.872	Amphiprion_ocellaris
ENSMODG00000009826	RPP40	98	36.872	ENSAPEG00000001322	rpp40	99	36.872	Amphiprion_percula
ENSMODG00000009826	RPP40	98	37.778	ENSATEG00000006584	rpp40	99	38.333	Anabas_testudineus
ENSMODG00000009826	RPP40	83	68.977	ENSAPLG00000005691	RPP40	99	68.977	Anas_platyrhynchos
ENSMODG00000009826	RPP40	99	65.000	ENSACAG00000006550	RPP40	88	65.000	Anolis_carolinensis
ENSMODG00000009826	RPP40	100	78.571	ENSANAG00000029246	RPP40	100	78.571	Aotus_nancymaae
ENSMODG00000009826	RPP40	98	37.360	ENSACLG00000015883	rpp40	96	37.360	Astatotilapia_calliptera
ENSMODG00000009826	RPP40	98	47.486	ENSAMXG00000001755	rpp40	99	47.486	Astyanax_mexicanus
ENSMODG00000009826	RPP40	100	77.747	ENSBTAG00000003332	RPP40	100	77.747	Bos_taurus
ENSMODG00000009826	RPP40	100	79.396	ENSCJAG00000021373	RPP40	100	79.396	Callithrix_jacchus
ENSMODG00000009826	RPP40	100	82.418	ENSCAFG00000009435	RPP40	100	82.418	Canis_familiaris
ENSMODG00000009826	RPP40	100	82.418	ENSCAFG00020013380	RPP40	100	82.418	Canis_lupus_dingo
ENSMODG00000009826	RPP40	100	77.473	ENSCHIG00000016849	RPP40	100	77.473	Capra_hircus
ENSMODG00000009826	RPP40	100	79.945	ENSTSYG00000032857	RPP40	100	79.945	Carlito_syrichta
ENSMODG00000009826	RPP40	90	71.646	ENSCAPG00000004957	RPP40	98	71.646	Cavia_aperea
ENSMODG00000009826	RPP40	100	79.396	ENSCPOG00000005855	RPP40	100	79.396	Cavia_porcellus
ENSMODG00000009826	RPP40	100	79.396	ENSCCAG00000019809	RPP40	100	79.396	Cebus_capucinus
ENSMODG00000009826	RPP40	100	80.220	ENSCATG00000038787	RPP40	100	80.220	Cercocebus_atys
ENSMODG00000009826	RPP40	100	78.297	ENSCLAG00000003235	RPP40	100	78.297	Chinchilla_lanigera
ENSMODG00000009826	RPP40	100	80.220	ENSCSAG00000007307	RPP40	100	80.220	Chlorocebus_sabaeus
ENSMODG00000009826	RPP40	69	61.753	ENSCHOG00000005856	-	100	61.753	Choloepus_hoffmanni
ENSMODG00000009826	RPP40	99	72.853	ENSCPBG00000009003	RPP40	99	72.853	Chrysemys_picta_bellii
ENSMODG00000009826	RPP40	100	81.044	ENSCANG00000033965	RPP40	100	81.044	Colobus_angolensis_palliatus
ENSMODG00000009826	RPP40	100	73.901	ENSCGRG00001018328	Rpp40	100	73.901	Cricetulus_griseus_chok1gshd
ENSMODG00000009826	RPP40	100	73.901	ENSCGRG00000011344	Rpp40	100	73.901	Cricetulus_griseus_crigri
ENSMODG00000009826	RPP40	98	34.454	ENSCSEG00000015006	-	98	34.454	Cynoglossus_semilaevis
ENSMODG00000009826	RPP40	74	32.616	ENSCVAG00000012169	rpp40	100	32.616	Cyprinodon_variegatus
ENSMODG00000009826	RPP40	99	49.582	ENSDARG00000017605	rpp40	99	49.582	Danio_rerio
ENSMODG00000009826	RPP40	82	76.510	ENSDNOG00000048136	RPP40	99	76.510	Dasypus_novemcinctus
ENSMODG00000009826	RPP40	100	58.021	ENSDORG00000011196	-	100	58.021	Dipodomys_ordii
ENSMODG00000009826	RPP40	100	77.198	ENSDORG00000029944	-	100	77.198	Dipodomys_ordii
ENSMODG00000009826	RPP40	100	62.363	ENSETEG00000007458	RPP40	100	62.363	Echinops_telfairi
ENSMODG00000009826	RPP40	98	44.101	ENSEBUG00000000386	rpp40	99	44.101	Eptatretus_burgeri
ENSMODG00000009826	RPP40	100	80.769	ENSEASG00005012116	RPP40	80	80.769	Equus_asinus_asinus
ENSMODG00000009826	RPP40	100	80.495	ENSECAG00000017247	RPP40	80	80.495	Equus_caballus
ENSMODG00000009826	RPP40	82	60.067	ENSEEUG00000012087	RPP40	100	60.067	Erinaceus_europaeus
ENSMODG00000009826	RPP40	98	49.721	ENSELUG00000017004	rpp40	99	49.721	Esox_lucius
ENSMODG00000009826	RPP40	100	80.769	ENSFCAG00000009249	RPP40	100	80.769	Felis_catus
ENSMODG00000009826	RPP40	86	67.278	ENSFALG00000013166	RPP40	100	67.278	Ficedula_albicollis
ENSMODG00000009826	RPP40	100	81.044	ENSFDAG00000013001	-	100	81.044	Fukomys_damarensis
ENSMODG00000009826	RPP40	80	63.481	ENSFDAG00000000265	-	99	63.481	Fukomys_damarensis
ENSMODG00000009826	RPP40	98	38.827	ENSFHEG00000021429	rpp40	88	38.827	Fundulus_heteroclitus
ENSMODG00000009826	RPP40	89	38.390	ENSGMOG00000018653	rpp40	100	38.390	Gadus_morhua
ENSMODG00000009826	RPP40	99	66.759	ENSGALG00000036074	RPP40	99	66.759	Gallus_gallus
ENSMODG00000009826	RPP40	82	33.110	ENSGAFG00000004189	-	98	33.110	Gambusia_affinis
ENSMODG00000009826	RPP40	97	39.548	ENSGACG00000002472	rpp40	98	39.548	Gasterosteus_aculeatus
ENSMODG00000009826	RPP40	99	72.576	ENSGAGG00000012918	RPP40	99	72.576	Gopherus_agassizii
ENSMODG00000009826	RPP40	100	80.220	ENSGGOG00000013764	RPP40	100	80.220	Gorilla_gorilla
ENSMODG00000009826	RPP40	90	35.843	ENSHBUG00000009378	rpp40	93	35.843	Haplochromis_burtoni
ENSMODG00000009826	RPP40	100	79.945	ENSHGLG00000004871	RPP40	100	79.945	Heterocephalus_glaber_female
ENSMODG00000009826	RPP40	100	79.945	ENSHGLG00100002080	RPP40	100	79.945	Heterocephalus_glaber_male
ENSMODG00000009826	RPP40	96	31.805	ENSHCOG00000013264	-	93	31.805	Hippocampus_comes
ENSMODG00000009826	RPP40	99	48.476	ENSIPUG00000008951	RPP40	99	48.476	Ictalurus_punctatus
ENSMODG00000009826	RPP40	100	77.198	ENSSTOG00000011199	RPP40	100	77.198	Ictidomys_tridecemlineatus
ENSMODG00000009826	RPP40	100	74.725	ENSJJAG00000020629	Rpp40	100	74.725	Jaculus_jaculus
ENSMODG00000009826	RPP40	98	35.754	ENSKMAG00000019358	rpp40	99	35.754	Kryptolebias_marmoratus
ENSMODG00000009826	RPP40	98	40.223	ENSLBEG00000022724	rpp40	99	40.223	Labrus_bergylta
ENSMODG00000009826	RPP40	99	60.942	ENSLACG00000014848	RPP40	99	60.942	Latimeria_chalumnae
ENSMODG00000009826	RPP40	100	53.571	ENSLOCG00000011650	rpp40	100	53.571	Lepisosteus_oculatus
ENSMODG00000009826	RPP40	84	78.618	ENSLAFG00000007530	RPP40	100	78.618	Loxodonta_africana
ENSMODG00000009826	RPP40	100	80.495	ENSMFAG00000043100	RPP40	100	80.495	Macaca_fascicularis
ENSMODG00000009826	RPP40	100	80.495	ENSMMUG00000004966	RPP40	100	80.495	Macaca_mulatta
ENSMODG00000009826	RPP40	100	80.495	ENSMNEG00000041986	RPP40	100	80.495	Macaca_nemestrina
ENSMODG00000009826	RPP40	98	71.508	ENSMLEG00000040851	RPP40	100	78.977	Mandrillus_leucophaeus
ENSMODG00000009826	RPP40	98	38.827	ENSMAMG00000019551	rpp40	98	38.827	Mastacembelus_armatus
ENSMODG00000009826	RPP40	99	37.845	ENSMZEG00005019475	rpp40	99	37.845	Maylandia_zebra
ENSMODG00000009826	RPP40	89	67.492	ENSMGAG00000004009	RPP40	89	67.492	Meleagris_gallopavo
ENSMODG00000009826	RPP40	100	77.473	ENSMAUG00000010268	Rpp40	100	77.473	Mesocricetus_auratus
ENSMODG00000009826	RPP40	100	80.769	ENSMICG00000003297	RPP40	100	75.275	Microcebus_murinus
ENSMODG00000009826	RPP40	100	77.198	ENSMOCG00000000305	Rpp40	100	77.198	Microtus_ochrogaster
ENSMODG00000009826	RPP40	98	32.123	ENSMMOG00000020591	-	99	32.123	Mola_mola
ENSMODG00000009826	RPP40	98	37.989	ENSMALG00000020133	rpp40	99	37.989	Monopterus_albus
ENSMODG00000009826	RPP40	100	77.473	MGP_CAROLIEiJ_G0018429	Rpp40	100	77.473	Mus_caroli
ENSMODG00000009826	RPP40	100	77.747	ENSMUSG00000021418	Rpp40	100	77.747	Mus_musculus
ENSMODG00000009826	RPP40	100	77.473	MGP_PahariEiJ_G0019497	Rpp40	100	77.473	Mus_pahari
ENSMODG00000009826	RPP40	100	78.022	MGP_SPRETEiJ_G0019309	Rpp40	100	78.022	Mus_spretus
ENSMODG00000009826	RPP40	100	81.593	ENSMPUG00000000530	RPP40	93	81.593	Mustela_putorius_furo
ENSMODG00000009826	RPP40	100	77.198	ENSMLUG00000000501	RPP40	100	77.198	Myotis_lucifugus
ENSMODG00000009826	RPP40	95	68.588	ENSNGAG00000022529	-	100	68.588	Nannospalax_galili
ENSMODG00000009826	RPP40	100	79.121	ENSNGAG00000023955	-	100	79.121	Nannospalax_galili
ENSMODG00000009826	RPP40	88	33.642	ENSNBRG00000017465	rpp40	86	33.841	Neolamprologus_brichardi
ENSMODG00000009826	RPP40	100	80.495	ENSNLEG00000034397	RPP40	100	80.495	Nomascus_leucogenys
ENSMODG00000009826	RPP40	100	86.264	ENSMEUG00000005300	RPP40	100	86.264	Notamacropus_eugenii
ENSMODG00000009826	RPP40	89	69.659	ENSODEG00000006170	-	100	69.659	Octodon_degus
ENSMODG00000009826	RPP40	100	76.374	ENSODEG00000007255	-	100	76.374	Octodon_degus
ENSMODG00000009826	RPP40	100	72.527	ENSODEG00000018153	-	100	72.527	Octodon_degus
ENSMODG00000009826	RPP40	99	37.569	ENSONIG00000014016	rpp40	99	37.569	Oreochromis_niloticus
ENSMODG00000009826	RPP40	83	77.815	ENSOANG00000001200	RPP40	99	77.815	Ornithorhynchus_anatinus
ENSMODG00000009826	RPP40	99	70.718	ENSOCUG00000000354	RPP40	99	70.718	Oryctolagus_cuniculus
ENSMODG00000009826	RPP40	99	36.842	ENSORLG00000008242	-	100	36.842	Oryzias_latipes
ENSMODG00000009826	RPP40	97	37.110	ENSORLG00020013745	-	91	36.565	Oryzias_latipes_hni
ENSMODG00000009826	RPP40	99	37.119	ENSORLG00015000887	-	100	37.119	Oryzias_latipes_hsok
ENSMODG00000009826	RPP40	99	37.569	ENSOMEG00000002747	rpp40	100	37.569	Oryzias_melastigma
ENSMODG00000009826	RPP40	100	80.495	ENSOGAG00000006055	RPP40	100	80.495	Otolemur_garnettii
ENSMODG00000009826	RPP40	91	75.075	ENSOARG00000018783	RPP40	100	75.987	Ovis_aries
ENSMODG00000009826	RPP40	100	79.945	ENSPPAG00000023703	RPP40	100	79.945	Pan_paniscus
ENSMODG00000009826	RPP40	100	80.495	ENSPPRG00000005612	RPP40	100	80.495	Panthera_pardus
ENSMODG00000009826	RPP40	100	74.176	ENSPTIG00000018847	RPP40	100	74.176	Panthera_tigris_altaica
ENSMODG00000009826	RPP40	100	80.495	ENSPTRG00000017690	RPP40	100	80.495	Pan_troglodytes
ENSMODG00000009826	RPP40	100	80.495	ENSPANG00000017865	RPP40	100	80.495	Papio_anubis
ENSMODG00000009826	RPP40	98	51.955	ENSPKIG00000006311	rpp40	99	51.811	Paramormyrops_kingsleyae
ENSMODG00000009826	RPP40	61	71.749	ENSPSIG00000007854	RPP40	100	71.749	Pelodiscus_sinensis
ENSMODG00000009826	RPP40	93	67.941	ENSPEMG00000020809	Rpp40	92	67.941	Peromyscus_maniculatus_bairdii
ENSMODG00000009826	RPP40	75	45.985	ENSPMAG00000008412	rpp40	99	45.985	Petromyzon_marinus
ENSMODG00000009826	RPP40	100	93.407	ENSPCIG00000010682	RPP40	100	93.407	Phascolarctos_cinereus
ENSMODG00000009826	RPP40	97	36.338	ENSPFOG00000011460	rpp40	97	36.338	Poecilia_formosa
ENSMODG00000009826	RPP40	97	36.544	ENSPLAG00000001334	rpp40	97	36.544	Poecilia_latipinna
ENSMODG00000009826	RPP40	97	36.544	ENSPMEG00000007721	rpp40	97	36.544	Poecilia_mexicana
ENSMODG00000009826	RPP40	97	37.677	ENSPREG00000009215	rpp40	97	37.677	Poecilia_reticulata
ENSMODG00000009826	RPP40	100	80.495	ENSPPYG00000016194	RPP40	100	80.495	Pongo_abelii
ENSMODG00000009826	RPP40	51	78.804	ENSPCAG00000002700	-	99	78.804	Procavia_capensis
ENSMODG00000009826	RPP40	100	80.769	ENSPCOG00000003907	RPP40	100	80.769	Propithecus_coquereli
ENSMODG00000009826	RPP40	100	81.044	ENSPVAG00000011325	RPP40	100	81.044	Pteropus_vampyrus
ENSMODG00000009826	RPP40	82	36.120	ENSPNYG00000004432	rpp40	98	36.120	Pundamilia_nyererei
ENSMODG00000009826	RPP40	98	46.369	ENSPNAG00000019125	rpp40	99	46.369	Pygocentrus_nattereri
ENSMODG00000009826	RPP40	100	77.747	ENSRNOG00000016226	Rpp40	100	77.747	Rattus_norvegicus
ENSMODG00000009826	RPP40	100	80.769	ENSRBIG00000035800	RPP40	100	80.769	Rhinopithecus_bieti
ENSMODG00000009826	RPP40	100	80.769	ENSRROG00000039116	RPP40	100	80.769	Rhinopithecus_roxellana
ENSMODG00000009826	RPP40	100	78.571	ENSSBOG00000020297	RPP40	100	78.571	Saimiri_boliviensis_boliviensis
ENSMODG00000009826	RPP40	77	91.398	ENSSHAG00000002102	RPP40	100	91.398	Sarcophilus_harrisii
ENSMODG00000009826	RPP40	99	49.036	ENSSFOG00015001142	rpp40	81	49.036	Scleropages_formosus
ENSMODG00000009826	RPP40	98	37.989	ENSSDUG00000007202	rpp40	99	37.989	Seriola_dumerili
ENSMODG00000009826	RPP40	98	38.268	ENSSLDG00000017563	rpp40	99	38.268	Seriola_lalandi_dorsalis
ENSMODG00000009826	RPP40	99	70.637	ENSSPUG00000017487	-	99	70.637	Sphenodon_punctatus
ENSMODG00000009826	RPP40	81	69.932	ENSSPUG00000018950	-	100	69.932	Sphenodon_punctatus
ENSMODG00000009826	RPP40	98	37.360	ENSSPAG00000022716	rpp40	98	37.360	Stegastes_partitus
ENSMODG00000009826	RPP40	100	76.648	ENSSSCG00000000998	RPP40	100	76.648	Sus_scrofa
ENSMODG00000009826	RPP40	99	68.245	ENSTGUG00000002258	-	100	68.245	Taeniopygia_guttata
ENSMODG00000009826	RPP40	97	38.136	ENSTRUG00000003755	rpp40	98	38.136	Takifugu_rubripes
ENSMODG00000009826	RPP40	97	37.006	ENSTNIG00000003077	rpp40	98	37.006	Tetraodon_nigroviridis
ENSMODG00000009826	RPP40	69	56.972	ENSTBEG00000014467	-	73	56.972	Tupaia_belangeri
ENSMODG00000009826	RPP40	99	73.278	ENSTTRG00000007319	RPP40	100	73.278	Tursiops_truncatus
ENSMODG00000009826	RPP40	100	81.044	ENSUAMG00000002159	RPP40	100	81.044	Ursus_americanus
ENSMODG00000009826	RPP40	100	81.044	ENSUMAG00000018639	RPP40	94	81.044	Ursus_maritimus
ENSMODG00000009826	RPP40	81	55.593	ENSVPAG00000004652	-	99	55.593	Vicugna_pacos
ENSMODG00000009826	RPP40	100	82.143	ENSVVUG00000005451	RPP40	100	82.143	Vulpes_vulpes
ENSMODG00000009826	RPP40	99	54.795	ENSXETG00000017617	rpp40	100	54.795	Xenopus_tropicalis
ENSMODG00000009826	RPP40	54	44.262	ENSXCOG00000019991	-	85	30.882	Xiphophorus_couchianus
ENSMODG00000009826	RPP40	97	30.312	ENSXMAG00000024940	rpp40	97	30.312	Xiphophorus_maculatus