EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000009964 (Gene tree)
Gene ID: 100020516
Gene Symbol: RIOK1
Alias: AD034|FLJ30006|RRP10|bA288G3.1
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 37454 bases
Position: chr3:337096266-337133719
Accession: 100020516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000012483	RIO1	PF01163.22	1.1e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000012709	RIOK1-201	3832	-	ENSMODP00000012483	567 (aa)	XP_007488050	F6Y7X8

Gene Model

Click here to download ENSMODG00000009964's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000009964's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000009964	RIOK1	64	40.568	ENSMODG00000021496	RIOK3	59	44.762

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000009964	RIOK1	100	78.066	ENSG00000124784	RIOK1	100	78.087	Homo_sapiens
ENSMODG00000009964	RIOK1	57	67.913	ENSAPOG00000015632	riok1	99	67.913	Acanthochromis_polyacanthus
ENSMODG00000009964	RIOK1	100	77.759	ENSAMEG00000017367	RIOK1	100	76.158	Ailuropoda_melanoleuca
ENSMODG00000009964	RIOK1	87	71.371	ENSACIG00000003735	riok1	95	67.652	Amphilophus_citrinellus
ENSMODG00000009964	RIOK1	99	67.553	ENSAOCG00000011818	riok1	100	65.845	Amphiprion_ocellaris
ENSMODG00000009964	RIOK1	99	67.199	ENSAPEG00000001345	riok1	100	66.726	Amphiprion_percula
ENSMODG00000009964	RIOK1	81	72.826	ENSATEG00000006594	riok1	99	72.826	Anabas_testudineus
ENSMODG00000009964	RIOK1	83	80.421	ENSAPLG00000004196	RIOK1	100	81.857	Anas_platyrhynchos
ENSMODG00000009964	RIOK1	100	73.905	ENSACAG00000000695	RIOK1	100	73.427	Anolis_carolinensis
ENSMODG00000009964	RIOK1	100	66.899	ENSANAG00000023777	RIOK1	100	67.247	Aotus_nancymaae
ENSMODG00000009964	RIOK1	99	66.489	ENSACLG00000015799	riok1	99	65.897	Astatotilapia_calliptera
ENSMODG00000009964	RIOK1	99	67.067	ENSAMXG00000015286	riok1	99	69.031	Astyanax_mexicanus
ENSMODG00000009964	RIOK1	100	75.648	ENSBTAG00000013821	RIOK1	100	76.389	Bos_taurus
ENSMODG00000009964	RIOK1	81	48.043	WBGene00019698	riok-1	85	47.280	Caenorhabditis_elegans
ENSMODG00000009964	RIOK1	100	77.352	ENSCJAG00000042960	RIOK1	100	77.682	Callithrix_jacchus
ENSMODG00000009964	RIOK1	100	78.421	ENSCAFG00000009563	RIOK1	100	77.816	Canis_familiaris
ENSMODG00000009964	RIOK1	97	75.725	ENSCAFG00020013233	RIOK1	99	75.134	Canis_lupus_dingo
ENSMODG00000009964	RIOK1	100	76.667	ENSCHIG00000001534	RIOK1	100	75.347	Capra_hircus
ENSMODG00000009964	RIOK1	66	80.371	ENSTSYG00000011368	RIOK1	100	82.569	Carlito_syrichta
ENSMODG00000009964	RIOK1	79	79.778	ENSCAPG00000008489	RIOK1	100	79.741	Cavia_aperea
ENSMODG00000009964	RIOK1	98	74.640	ENSCPOG00000009882	RIOK1	100	74.737	Cavia_porcellus
ENSMODG00000009964	RIOK1	100	78.397	ENSCCAG00000024061	RIOK1	100	77.352	Cebus_capucinus
ENSMODG00000009964	RIOK1	100	78.596	ENSCATG00000001548	RIOK1	100	78.846	Cercocebus_atys
ENSMODG00000009964	RIOK1	100	77.895	ENSCLAG00000003522	RIOK1	100	76.083	Chinchilla_lanigera
ENSMODG00000009964	RIOK1	95	76.438	ENSCSAG00000007396	RIOK1	99	76.481	Chlorocebus_sabaeus
ENSMODG00000009964	RIOK1	85	70.000	ENSCHOG00000001873	RIOK1	85	69.876	Choloepus_hoffmanni
ENSMODG00000009964	RIOK1	94	75.422	ENSCPBG00000008685	RIOK1	91	76.822	Chrysemys_picta_bellii
ENSMODG00000009964	RIOK1	100	78.070	ENSCANG00000032919	RIOK1	100	76.511	Colobus_angolensis_palliatus
ENSMODG00000009964	RIOK1	92	76.000	ENSCGRG00001018868	Riok1	87	77.890	Cricetulus_griseus_chok1gshd
ENSMODG00000009964	RIOK1	92	76.000	ENSCGRG00000008015	Riok1	87	77.890	Cricetulus_griseus_crigri
ENSMODG00000009964	RIOK1	87	51.394	ENSCSEG00000015014	riok1	86	51.919	Cynoglossus_semilaevis
ENSMODG00000009964	RIOK1	57	63.303	ENSCVAG00000011291	riok1	99	63.303	Cyprinodon_variegatus
ENSMODG00000009964	RIOK1	99	68.206	ENSDARG00000016399	riok1	87	73.577	Danio_rerio
ENSMODG00000009964	RIOK1	100	78.360	ENSDNOG00000015813	RIOK1	100	77.257	Dasypus_novemcinctus
ENSMODG00000009964	RIOK1	100	78.246	ENSDORG00000008530	Riok1	100	78.497	Dipodomys_ordii
ENSMODG00000009964	RIOK1	80	53.178	FBgn0036187	RIOK1	82	51.411	Drosophila_melanogaster
ENSMODG00000009964	RIOK1	100	75.965	ENSETEG00000020273	RIOK1	100	75.482	Echinops_telfairi
ENSMODG00000009964	RIOK1	86	66.871	ENSEBUG00000013672	riok1	86	67.821	Eptatretus_burgeri
ENSMODG00000009964	RIOK1	94	77.528	ENSEASG00005012032	RIOK1	94	75.370	Equus_asinus_asinus
ENSMODG00000009964	RIOK1	100	78.070	ENSECAG00000009007	RIOK1	100	76.042	Equus_caballus
ENSMODG00000009964	RIOK1	77	69.932	ENSEEUG00000007123	RIOK1	99	69.932	Erinaceus_europaeus
ENSMODG00000009964	RIOK1	99	67.496	ENSELUG00000017029	riok1	87	72.245	Esox_lucius
ENSMODG00000009964	RIOK1	100	77.273	ENSFCAG00000027290	RIOK1	100	77.273	Felis_catus
ENSMODG00000009964	RIOK1	100	75.260	ENSFALG00000013244	RIOK1	100	76.056	Ficedula_albicollis
ENSMODG00000009964	RIOK1	100	75.614	ENSFDAG00000019139	RIOK1	100	74.266	Fukomys_damarensis
ENSMODG00000009964	RIOK1	80	67.686	ENSFHEG00000021419	riok1	85	74.870	Fundulus_heteroclitus
ENSMODG00000009964	RIOK1	73	70.743	ENSGMOG00000018668	riok1	92	73.350	Gadus_morhua
ENSMODG00000009964	RIOK1	57	75.692	ENSGALG00000012795	RIOK1	100	77.308	Gallus_gallus
ENSMODG00000009964	RIOK1	84	60.211	ENSGAFG00000004091	riok1	79	61.975	Gambusia_affinis
ENSMODG00000009964	RIOK1	96	63.686	ENSGACG00000002496	riok1	94	71.984	Gasterosteus_aculeatus
ENSMODG00000009964	RIOK1	82	78.326	ENSGAGG00000002262	RIOK1	98	78.723	Gopherus_agassizii
ENSMODG00000009964	RIOK1	100	64.138	ENSGGOG00000011037	RIOK1	100	64.062	Gorilla_gorilla
ENSMODG00000009964	RIOK1	100	74.912	ENSHGLG00000008699	RIOK1	100	73.137	Heterocephalus_glaber_female
ENSMODG00000009964	RIOK1	100	75.439	ENSHGLG00100008188	RIOK1	100	73.657	Heterocephalus_glaber_male
ENSMODG00000009964	RIOK1	87	69.400	ENSHCOG00000013275	riok1	91	69.777	Hippocampus_comes
ENSMODG00000009964	RIOK1	99	69.444	ENSIPUG00000003290	riok1	86	75.100	Ictalurus_punctatus
ENSMODG00000009964	RIOK1	100	79.123	ENSSTOG00000009289	RIOK1	100	77.586	Ictidomys_tridecemlineatus
ENSMODG00000009964	RIOK1	100	76.720	ENSJJAG00000015152	Riok1	100	75.131	Jaculus_jaculus
ENSMODG00000009964	RIOK1	68	75.325	ENSKMAG00000019378	riok1	98	75.325	Kryptolebias_marmoratus
ENSMODG00000009964	RIOK1	87	71.774	ENSLBEG00000016650	riok1	86	73.878	Labrus_bergylta
ENSMODG00000009964	RIOK1	100	63.574	ENSLACG00000000300	RIOK1	100	64.444	Latimeria_chalumnae
ENSMODG00000009964	RIOK1	99	70.410	ENSLOCG00000011728	riok1	86	76.876	Lepisosteus_oculatus
ENSMODG00000009964	RIOK1	100	76.950	ENSLAFG00000005504	RIOK1	100	77.526	Loxodonta_africana
ENSMODG00000009964	RIOK1	100	78.421	ENSMFAG00000029990	RIOK1	100	78.634	Macaca_fascicularis
ENSMODG00000009964	RIOK1	100	78.246	ENSMMUG00000015577	RIOK1	100	78.459	Macaca_mulatta
ENSMODG00000009964	RIOK1	100	75.088	ENSMNEG00000034396	RIOK1	99	79.657	Macaca_nemestrina
ENSMODG00000009964	RIOK1	100	78.772	ENSMLEG00000026327	RIOK1	100	79.021	Mandrillus_leucophaeus
ENSMODG00000009964	RIOK1	98	67.684	ENSMAMG00000019557	riok1	99	68.393	Mastacembelus_armatus
ENSMODG00000009964	RIOK1	99	65.542	ENSMZEG00005019482	riok1	99	65.897	Maylandia_zebra
ENSMODG00000009964	RIOK1	100	74.120	ENSMGAG00000003816	RIOK1	100	72.964	Meleagris_gallopavo
ENSMODG00000009964	RIOK1	99	74.245	ENSMAUG00000012751	Riok1	87	78.905	Mesocricetus_auratus
ENSMODG00000009964	RIOK1	100	77.391	ENSMICG00000044301	RIOK1	84	75.478	Microcebus_murinus
ENSMODG00000009964	RIOK1	99	73.357	ENSMOCG00000017032	Riok1	87	77.236	Microtus_ochrogaster
ENSMODG00000009964	RIOK1	83	64.072	ENSMMOG00000020598	riok1	87	64.032	Mola_mola
ENSMODG00000009964	RIOK1	84	66.456	ENSMALG00000019982	riok1	89	66.245	Monopterus_albus
ENSMODG00000009964	RIOK1	99	73.002	MGP_CAROLIEiJ_G0018439	Riok1	87	78.296	Mus_caroli
ENSMODG00000009964	RIOK1	99	73.016	ENSMUSG00000021428	Riok1	99	69.268	Mus_musculus
ENSMODG00000009964	RIOK1	99	72.615	MGP_PahariEiJ_G0019507	Riok1	87	77.688	Mus_pahari
ENSMODG00000009964	RIOK1	99	72.968	MGP_SPRETEiJ_G0019319	Riok1	87	78.093	Mus_spretus
ENSMODG00000009964	RIOK1	100	78.459	ENSMPUG00000000570	RIOK1	100	78.459	Mustela_putorius_furo
ENSMODG00000009964	RIOK1	100	77.836	ENSMLUG00000015312	RIOK1	100	77.163	Myotis_lucifugus
ENSMODG00000009964	RIOK1	100	76.897	ENSNGAG00000021734	Riok1	100	76.440	Nannospalax_galili
ENSMODG00000009964	RIOK1	70	77.778	ENSNBRG00000017489	riok1	83	72.624	Neolamprologus_brichardi
ENSMODG00000009964	RIOK1	100	70.105	ENSNLEG00000011621	RIOK1	100	70.979	Nomascus_leucogenys
ENSMODG00000009964	RIOK1	83	58.774	ENSMEUG00000006679	-	84	58.774	Notamacropus_eugenii
ENSMODG00000009964	RIOK1	65	80.270	ENSOPRG00000009524	RIOK1	99	80.270	Ochotona_princeps
ENSMODG00000009964	RIOK1	71	66.253	ENSODEG00000005663	RIOK1	100	66.501	Octodon_degus
ENSMODG00000009964	RIOK1	98	67.082	ENSONIG00000014010	riok1	86	72.857	Oreochromis_niloticus
ENSMODG00000009964	RIOK1	81	85.345	ENSOANG00000012553	RIOK1	100	86.207	Ornithorhynchus_anatinus
ENSMODG00000009964	RIOK1	100	77.544	ENSOCUG00000011824	RIOK1	100	75.475	Oryctolagus_cuniculus
ENSMODG00000009964	RIOK1	98	67.318	ENSORLG00000008221	riok1	99	67.558	Oryzias_latipes
ENSMODG00000009964	RIOK1	98	64.349	ENSORLG00020013838	riok1	70	65.653	Oryzias_latipes_hni
ENSMODG00000009964	RIOK1	98	66.310	ENSORLG00015009817	riok1	98	67.201	Oryzias_latipes_hsok
ENSMODG00000009964	RIOK1	98	66.905	ENSOMEG00000002758	riok1	78	73.333	Oryzias_melastigma
ENSMODG00000009964	RIOK1	100	71.103	ENSOGAG00000010192	RIOK1	100	70.639	Otolemur_garnettii
ENSMODG00000009964	RIOK1	100	77.544	ENSOARG00000017747	RIOK1	100	77.003	Ovis_aries
ENSMODG00000009964	RIOK1	100	69.828	ENSPPAG00000016349	RIOK1	100	80.122	Pan_paniscus
ENSMODG00000009964	RIOK1	100	77.098	ENSPPRG00000001932	RIOK1	100	77.098	Panthera_pardus
ENSMODG00000009964	RIOK1	100	77.273	ENSPTIG00000018545	RIOK1	100	77.273	Panthera_tigris_altaica
ENSMODG00000009964	RIOK1	100	78.066	ENSPTRG00000017700	RIOK1	100	78.087	Pan_troglodytes
ENSMODG00000009964	RIOK1	100	78.596	ENSPANG00000016522	RIOK1	100	78.846	Papio_anubis
ENSMODG00000009964	RIOK1	99	69.002	ENSPKIG00000006442	riok1	88	75.152	Paramormyrops_kingsleyae
ENSMODG00000009964	RIOK1	100	76.977	ENSPSIG00000006488	RIOK1	99	77.504	Pelodiscus_sinensis
ENSMODG00000009964	RIOK1	73	70.702	ENSPMGG00000017807	riok1	96	68.889	Periophthalmus_magnuspinnatus
ENSMODG00000009964	RIOK1	86	79.513	ENSPEMG00000017844	Riok1	87	79.513	Peromyscus_maniculatus_bairdii
ENSMODG00000009964	RIOK1	71	69.007	ENSPMAG00000006351	riok1	79	78.012	Petromyzon_marinus
ENSMODG00000009964	RIOK1	94	89.286	ENSPCIG00000012653	RIOK1	94	89.474	Phascolarctos_cinereus
ENSMODG00000009964	RIOK1	98	62.590	ENSPFOG00000011532	riok1	87	69.038	Poecilia_formosa
ENSMODG00000009964	RIOK1	98	62.903	ENSPLAG00000001341	riok1	87	69.038	Poecilia_latipinna
ENSMODG00000009964	RIOK1	98	62.590	ENSPMEG00000007710	riok1	89	68.828	Poecilia_mexicana
ENSMODG00000009964	RIOK1	98	63.262	ENSPREG00000009237	riok1	87	69.409	Poecilia_reticulata
ENSMODG00000009964	RIOK1	100	77.931	ENSPPYG00000016207	RIOK1	100	77.951	Pongo_abelii
ENSMODG00000009964	RIOK1	100	66.667	ENSPCAG00000007892	RIOK1	100	65.679	Procavia_capensis
ENSMODG00000009964	RIOK1	100	79.545	ENSPVAG00000014091	RIOK1	100	79.545	Pteropus_vampyrus
ENSMODG00000009964	RIOK1	57	70.370	ENSPNYG00000004465	riok1	100	70.988	Pundamilia_nyererei
ENSMODG00000009964	RIOK1	99	69.788	ENSPNAG00000015435	riok1	99	69.031	Pygocentrus_nattereri
ENSMODG00000009964	RIOK1	99	72.134	ENSRNOG00000014049	Riok1	100	79.741	Rattus_norvegicus
ENSMODG00000009964	RIOK1	100	75.779	ENSRBIG00000036685	RIOK1	100	77.758	Rhinopithecus_bieti
ENSMODG00000009964	RIOK1	100	75.952	ENSRROG00000036611	RIOK1	100	77.933	Rhinopithecus_roxellana
ENSMODG00000009964	RIOK1	59	40.997	YOR119C	RIO1	95	37.577	Saccharomyces_cerevisiae
ENSMODG00000009964	RIOK1	100	78.435	ENSSBOG00000012588	RIOK1	100	78.066	Saimiri_boliviensis_boliviensis
ENSMODG00000009964	RIOK1	85	91.564	ENSSHAG00000003091	RIOK1	93	90.535	Sarcophilus_harrisii
ENSMODG00000009964	RIOK1	86	74.949	ENSSFOG00015001035	riok1	88	76.423	Scleropages_formosus
ENSMODG00000009964	RIOK1	57	67.284	ENSSDUG00000007291	riok1	100	66.975	Seriola_dumerili
ENSMODG00000009964	RIOK1	98	68.582	ENSSLDG00000017657	riok1	88	73.211	Seriola_lalandi_dorsalis
ENSMODG00000009964	RIOK1	85	68.672	ENSSPUG00000007624	RIOK1	83	68.672	Sphenodon_punctatus
ENSMODG00000009964	RIOK1	99	67.023	ENSSPAG00000022710	riok1	100	67.321	Stegastes_partitus
ENSMODG00000009964	RIOK1	100	75.524	ENSSSCG00000001024	RIOK1	100	75.524	Sus_scrofa
ENSMODG00000009964	RIOK1	100	75.789	ENSTGUG00000002331	RIOK1	100	76.491	Taeniopygia_guttata
ENSMODG00000009964	RIOK1	52	64.746	ENSTRUG00000001575	-	100	64.746	Takifugu_rubripes
ENSMODG00000009964	RIOK1	77	59.410	ENSTRUG00000002854	riok1	94	64.249	Takifugu_rubripes
ENSMODG00000009964	RIOK1	99	58.741	ENSTNIG00000003078	riok1	85	65.560	Tetraodon_nigroviridis
ENSMODG00000009964	RIOK1	100	74.216	ENSTBEG00000016730	RIOK1	100	74.653	Tupaia_belangeri
ENSMODG00000009964	RIOK1	68	86.340	ENSTTRG00000017335	RIOK1	81	86.340	Tursiops_truncatus
ENSMODG00000009964	RIOK1	94	76.838	ENSUAMG00000003721	RIOK1	96	75.137	Ursus_americanus
ENSMODG00000009964	RIOK1	100	77.586	ENSUMAG00000018461	RIOK1	100	75.986	Ursus_maritimus
ENSMODG00000009964	RIOK1	60	83.682	ENSVPAG00000010813	-	63	83.333	Vicugna_pacos
ENSMODG00000009964	RIOK1	100	78.772	ENSVVUG00000005018	RIOK1	100	78.163	Vulpes_vulpes
ENSMODG00000009964	RIOK1	87	72.088	ENSXETG00000020436	riok1	86	73.101	Xenopus_tropicalis
ENSMODG00000009964	RIOK1	83	65.539	ENSXCOG00000000245	riok1	100	65.539	Xiphophorus_couchianus
ENSMODG00000009964	RIOK1	85	65.021	ENSXMAG00000014572	riok1	82	70.142	Xiphophorus_maculatus