EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000009996 (Gene tree)
Gene ID: 100027766
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 24855 bases
Position: chr3:336851686-336876540
Accession: 100027766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000012514	zf-U11-48K	PF05253.12	2.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000012742	SNRNP48-201	1905	-	ENSMODP00000012514	369 (aa)	XP_007488048	F6USA8

Gene Model

Click here to download ENSMODG00000009996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000009996's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000009996	SNRNP48	93	70.058	ENSG00000168566	SNRNP48	98	70.058	Homo_sapiens
ENSMODG00000009996	SNRNP48	78	47.945	ENSAPOG00000021430	snrnp48	84	47.651	Acanthochromis_polyacanthus
ENSMODG00000009996	SNRNP48	93	72.093	ENSAMEG00000017349	SNRNP48	99	72.093	Ailuropoda_melanoleuca
ENSMODG00000009996	SNRNP48	85	44.551	ENSACIG00000002032	snrnp48	83	45.918	Amphilophus_citrinellus
ENSMODG00000009996	SNRNP48	78	47.079	ENSAOCG00000010562	snrnp48	84	46.801	Amphiprion_ocellaris
ENSMODG00000009996	SNRNP48	78	46.392	ENSAPEG00000003231	snrnp48	84	46.128	Amphiprion_percula
ENSMODG00000009996	SNRNP48	78	46.713	ENSATEG00000020210	snrnp48	85	46.780	Anabas_testudineus
ENSMODG00000009996	SNRNP48	79	71.088	ENSACAG00000002811	SNRNP48	77	73.387	Anolis_carolinensis
ENSMODG00000009996	SNRNP48	93	69.186	ENSANAG00000033538	SNRNP48	98	69.767	Aotus_nancymaae
ENSMODG00000009996	SNRNP48	87	47.678	ENSAMXG00000015309	snrnp48	86	49.832	Astyanax_mexicanus
ENSMODG00000009996	SNRNP48	93	68.986	ENSBTAG00000001123	SNRNP48	99	68.986	Bos_taurus
ENSMODG00000009996	SNRNP48	93	70.349	ENSCJAG00000021330	SNRNP48	98	70.349	Callithrix_jacchus
ENSMODG00000009996	SNRNP48	99	68.464	ENSCAFG00000009574	SNRNP48	88	68.464	Canis_familiaris
ENSMODG00000009996	SNRNP48	93	71.594	ENSCAFG00020013203	SNRNP48	98	71.594	Canis_lupus_dingo
ENSMODG00000009996	SNRNP48	93	69.565	ENSCHIG00000015216	SNRNP48	99	69.565	Capra_hircus
ENSMODG00000009996	SNRNP48	93	69.767	ENSTSYG00000000698	SNRNP48	98	69.767	Carlito_syrichta
ENSMODG00000009996	SNRNP48	85	69.010	ENSCAPG00000006768	SNRNP48	98	69.010	Cavia_aperea
ENSMODG00000009996	SNRNP48	93	69.186	ENSCPOG00000007910	SNRNP48	98	69.767	Cavia_porcellus
ENSMODG00000009996	SNRNP48	93	69.767	ENSCCAG00000035652	SNRNP48	98	69.767	Cebus_capucinus
ENSMODG00000009996	SNRNP48	93	69.767	ENSCATG00000033947	SNRNP48	98	69.767	Cercocebus_atys
ENSMODG00000009996	SNRNP48	93	69.186	ENSCLAG00000003765	SNRNP48	98	69.767	Chinchilla_lanigera
ENSMODG00000009996	SNRNP48	93	70.640	ENSCSAG00000007409	SNRNP48	98	70.640	Chlorocebus_sabaeus
ENSMODG00000009996	SNRNP48	80	73.510	ENSCPBG00000019146	SNRNP48	91	73.510	Chrysemys_picta_bellii
ENSMODG00000009996	SNRNP48	73	31.295	ENSCING00000004121	-	74	31.600	Ciona_intestinalis
ENSMODG00000009996	SNRNP48	93	70.349	ENSCANG00000030017	SNRNP48	98	70.349	Colobus_angolensis_palliatus
ENSMODG00000009996	SNRNP48	93	56.232	ENSCGRG00001008805	-	83	58.000	Cricetulus_griseus_chok1gshd
ENSMODG00000009996	SNRNP48	93	69.855	ENSCGRG00001001076	-	99	69.565	Cricetulus_griseus_chok1gshd
ENSMODG00000009996	SNRNP48	93	69.855	ENSCGRG00000007781	Snrnp48	99	69.565	Cricetulus_griseus_crigri
ENSMODG00000009996	SNRNP48	70	46.923	ENSCSEG00000000722	snrnp48	78	45.614	Cynoglossus_semilaevis
ENSMODG00000009996	SNRNP48	91	44.214	ENSCVAG00000019829	snrnp48	73	45.608	Cyprinodon_variegatus
ENSMODG00000009996	SNRNP48	80	48.485	ENSDARG00000039989	snrnp48	84	48.485	Danio_rerio
ENSMODG00000009996	SNRNP48	92	73.314	ENSDNOG00000014978	SNRNP48	97	73.314	Dasypus_novemcinctus
ENSMODG00000009996	SNRNP48	93	66.860	ENSDORG00000015140	Snrnp48	98	66.860	Dipodomys_ordii
ENSMODG00000009996	SNRNP48	93	70.145	ENSEASG00005012021	SNRNP48	99	70.145	Equus_asinus_asinus
ENSMODG00000009996	SNRNP48	93	70.725	ENSECAG00000026937	SNRNP48	99	70.725	Equus_caballus
ENSMODG00000009996	SNRNP48	93	54.493	ENSEEUG00000015437	SNRNP48	98	54.493	Erinaceus_europaeus
ENSMODG00000009996	SNRNP48	80	50.000	ENSELUG00000009766	snrnp48	76	51.246	Esox_lucius
ENSMODG00000009996	SNRNP48	93	72.174	ENSFCAG00000018853	SNRNP48	98	72.174	Felis_catus
ENSMODG00000009996	SNRNP48	79	71.769	ENSFALG00000007797	SNRNP48	93	71.769	Ficedula_albicollis
ENSMODG00000009996	SNRNP48	93	68.605	ENSFDAG00000009231	SNRNP48	98	68.605	Fukomys_damarensis
ENSMODG00000009996	SNRNP48	54	53.465	ENSFHEG00000014647	snrnp48	82	51.261	Fundulus_heteroclitus
ENSMODG00000009996	SNRNP48	86	44.548	ENSGMOG00000018599	-	86	45.993	Gadus_morhua
ENSMODG00000009996	SNRNP48	74	72.628	ENSGALG00000013005	SNRNP48	84	73.307	Gallus_gallus
ENSMODG00000009996	SNRNP48	77	47.038	ENSGAFG00000021639	snrnp48	83	46.801	Gambusia_affinis
ENSMODG00000009996	SNRNP48	68	47.619	ENSGACG00000017756	-	86	46.780	Gasterosteus_aculeatus
ENSMODG00000009996	SNRNP48	80	72.517	ENSGAGG00000000865	SNRNP48	97	72.517	Gopherus_agassizii
ENSMODG00000009996	SNRNP48	93	70.349	ENSGGOG00000013220	SNRNP48	98	70.349	Gorilla_gorilla
ENSMODG00000009996	SNRNP48	69	48.047	ENSHBUG00000017066	snrnp48	82	47.099	Haplochromis_burtoni
ENSMODG00000009996	SNRNP48	93	69.767	ENSHGLG00000015241	SNRNP48	98	69.767	Heterocephalus_glaber_female
ENSMODG00000009996	SNRNP48	93	69.767	ENSHGLG00100010027	SNRNP48	98	69.767	Heterocephalus_glaber_male
ENSMODG00000009996	SNRNP48	68	45.098	ENSHCOG00000014066	snrnp48	85	43.000	Hippocampus_comes
ENSMODG00000009996	SNRNP48	93	71.221	ENSSTOG00000014635	SNRNP48	98	71.221	Ictidomys_tridecemlineatus
ENSMODG00000009996	SNRNP48	93	68.023	ENSJJAG00000011495	Snrnp48	98	68.023	Jaculus_jaculus
ENSMODG00000009996	SNRNP48	68	48.016	ENSKMAG00000016514	snrnp48	83	46.259	Kryptolebias_marmoratus
ENSMODG00000009996	SNRNP48	72	48.699	ENSLBEG00000026249	snrnp48	82	48.097	Labrus_bergylta
ENSMODG00000009996	SNRNP48	92	56.647	ENSLACG00000003958	SNRNP48	86	56.333	Latimeria_chalumnae
ENSMODG00000009996	SNRNP48	81	54.221	ENSLOCG00000004187	snrnp48	87	54.221	Lepisosteus_oculatus
ENSMODG00000009996	SNRNP48	92	68.915	ENSLAFG00000011152	SNRNP48	97	69.501	Loxodonta_africana
ENSMODG00000009996	SNRNP48	93	70.640	ENSMFAG00000045216	SNRNP48	98	70.640	Macaca_fascicularis
ENSMODG00000009996	SNRNP48	93	70.640	ENSMMUG00000014785	SNRNP48	98	70.640	Macaca_mulatta
ENSMODG00000009996	SNRNP48	93	70.058	ENSMNEG00000042269	SNRNP48	98	70.640	Macaca_nemestrina
ENSMODG00000009996	SNRNP48	93	70.640	ENSMLEG00000034004	SNRNP48	98	70.640	Mandrillus_leucophaeus
ENSMODG00000009996	SNRNP48	74	47.273	ENSMAMG00000018673	snrnp48	75	46.865	Mastacembelus_armatus
ENSMODG00000009996	SNRNP48	78	69.759	ENSMGAG00000006037	SNRNP48	83	72.653	Meleagris_gallopavo
ENSMODG00000009996	SNRNP48	93	69.942	ENSMAUG00000011944	Snrnp48	99	69.653	Mesocricetus_auratus
ENSMODG00000009996	SNRNP48	93	69.186	ENSMICG00000012497	SNRNP48	98	69.767	Microcebus_murinus
ENSMODG00000009996	SNRNP48	93	70.809	ENSMOCG00000015555	Snrnp48	99	70.520	Microtus_ochrogaster
ENSMODG00000009996	SNRNP48	50	51.892	ENSMMOG00000003072	-	58	51.892	Mola_mola
ENSMODG00000009996	SNRNP48	69	48.627	ENSMALG00000005725	snrnp48	83	46.599	Monopterus_albus
ENSMODG00000009996	SNRNP48	93	69.565	MGP_CAROLIEiJ_G0018441	Snrnp48	99	69.275	Mus_caroli
ENSMODG00000009996	SNRNP48	95	68.946	ENSMUSG00000021431	Snrnp48	99	68.661	Mus_musculus
ENSMODG00000009996	SNRNP48	93	69.855	MGP_PahariEiJ_G0019509	Snrnp48	99	69.565	Mus_pahari
ENSMODG00000009996	SNRNP48	93	68.986	MGP_SPRETEiJ_G0019321	Snrnp48	99	68.696	Mus_spretus
ENSMODG00000009996	SNRNP48	93	68.986	ENSNGAG00000004849	Snrnp48	99	68.986	Nannospalax_galili
ENSMODG00000009996	SNRNP48	69	48.047	ENSNBRG00000012127	snrnp48	82	47.099	Neolamprologus_brichardi
ENSMODG00000009996	SNRNP48	93	70.349	ENSNLEG00000011667	SNRNP48	98	70.349	Nomascus_leucogenys
ENSMODG00000009996	SNRNP48	90	64.955	ENSOPRG00000015471	SNRNP48	89	66.443	Ochotona_princeps
ENSMODG00000009996	SNRNP48	88	43.558	ENSONIG00000001520	snrnp48	82	46.758	Oreochromis_niloticus
ENSMODG00000009996	SNRNP48	53	66.029	ENSOANG00000019888	-	100	66.986	Ornithorhynchus_anatinus
ENSMODG00000009996	SNRNP48	77	70.775	ENSOCUG00000005168	SNRNP48	94	71.141	Oryctolagus_cuniculus
ENSMODG00000009996	SNRNP48	85	45.714	ENSORLG00000015654	snrnp48	82	46.441	Oryzias_latipes
ENSMODG00000009996	SNRNP48	85	45.223	ENSORLG00020015976	snrnp48	72	45.545	Oryzias_latipes_hni
ENSMODG00000009996	SNRNP48	85	45.860	ENSORLG00015022379	snrnp48	72	46.205	Oryzias_latipes_hsok
ENSMODG00000009996	SNRNP48	79	47.260	ENSOMEG00000022007	snrnp48	82	47.260	Oryzias_melastigma
ENSMODG00000009996	SNRNP48	87	69.782	ENSOGAG00000005275	SNRNP48	86	70.270	Otolemur_garnettii
ENSMODG00000009996	SNRNP48	80	72.449	ENSOARG00000017319	SNRNP48	99	72.449	Ovis_aries
ENSMODG00000009996	SNRNP48	93	70.349	ENSPPAG00000032873	SNRNP48	98	70.349	Pan_paniscus
ENSMODG00000009996	SNRNP48	93	71.884	ENSPPRG00000004283	SNRNP48	98	71.884	Panthera_pardus
ENSMODG00000009996	SNRNP48	80	72.789	ENSPTIG00000013502	SNRNP48	99	72.789	Panthera_tigris_altaica
ENSMODG00000009996	SNRNP48	93	70.349	ENSPTRG00000017703	SNRNP48	98	70.349	Pan_troglodytes
ENSMODG00000009996	SNRNP48	93	70.640	ENSPANG00000000771	SNRNP48	98	70.640	Papio_anubis
ENSMODG00000009996	SNRNP48	89	46.802	ENSPKIG00000013703	snrnp48	60	50.174	Paramormyrops_kingsleyae
ENSMODG00000009996	SNRNP48	82	69.032	ENSPSIG00000002213	SNRNP48	83	71.970	Pelodiscus_sinensis
ENSMODG00000009996	SNRNP48	70	47.710	ENSPMGG00000008120	snrnp48	91	47.893	Periophthalmus_magnuspinnatus
ENSMODG00000009996	SNRNP48	93	70.520	ENSPEMG00000008872	Snrnp48	99	70.231	Peromyscus_maniculatus_bairdii
ENSMODG00000009996	SNRNP48	77	47.902	ENSPFOG00000003578	snrnp48	83	47.635	Poecilia_formosa
ENSMODG00000009996	SNRNP48	64	48.347	ENSPLAG00000002290	snrnp48	81	48.347	Poecilia_latipinna
ENSMODG00000009996	SNRNP48	77	47.552	ENSPMEG00000018033	snrnp48	83	47.297	Poecilia_mexicana
ENSMODG00000009996	SNRNP48	69	49.035	ENSPREG00000018541	snrnp48	83	47.987	Poecilia_reticulata
ENSMODG00000009996	SNRNP48	93	69.477	ENSPPYG00000016209	SNRNP48	98	69.477	Pongo_abelii
ENSMODG00000009996	SNRNP48	72	57.895	ENSPCAG00000011991	SNRNP48	97	59.160	Procavia_capensis
ENSMODG00000009996	SNRNP48	93	70.930	ENSPVAG00000002854	SNRNP48	98	70.930	Pteropus_vampyrus
ENSMODG00000009996	SNRNP48	88	40.491	ENSPNYG00000015399	snrnp48	90	46.758	Pundamilia_nyererei
ENSMODG00000009996	SNRNP48	93	70.231	ENSRNOG00000013756	Snrnp48	99	69.942	Rattus_norvegicus
ENSMODG00000009996	SNRNP48	86	71.069	ENSRBIG00000043856	SNRNP48	91	71.477	Rhinopithecus_bieti
ENSMODG00000009996	SNRNP48	93	70.349	ENSRROG00000043229	SNRNP48	98	70.349	Rhinopithecus_roxellana
ENSMODG00000009996	SNRNP48	93	70.058	ENSSBOG00000019486	SNRNP48	98	70.058	Saimiri_boliviensis_boliviensis
ENSMODG00000009996	SNRNP48	95	92.068	ENSSHAG00000014483	SNRNP48	100	92.068	Sarcophilus_harrisii
ENSMODG00000009996	SNRNP48	76	48.227	ENSSFOG00015006610	snrnp48	72	47.516	Scleropages_formosus
ENSMODG00000009996	SNRNP48	84	45.079	ENSSDUG00000014953	snrnp48	83	45.946	Seriola_dumerili
ENSMODG00000009996	SNRNP48	84	45.079	ENSSLDG00000005989	snrnp48	83	45.946	Seriola_lalandi_dorsalis
ENSMODG00000009996	SNRNP48	80	74.916	ENSSPUG00000006257	SNRNP48	85	74.916	Sphenodon_punctatus
ENSMODG00000009996	SNRNP48	76	47.183	ENSSPAG00000006454	snrnp48	82	46.897	Stegastes_partitus
ENSMODG00000009996	SNRNP48	80	69.360	ENSTGUG00000007575	SNRNP48	79	71.600	Taeniopygia_guttata
ENSMODG00000009996	SNRNP48	68	46.850	ENSTRUG00000007031	snrnp48	85	44.746	Takifugu_rubripes
ENSMODG00000009996	SNRNP48	88	40.909	ENSTNIG00000012977	-	85	42.123	Tetraodon_nigroviridis
ENSMODG00000009996	SNRNP48	71	73.004	ENSTBEG00000015620	SNRNP48	78	73.004	Tupaia_belangeri
ENSMODG00000009996	SNRNP48	93	70.349	ENSTTRG00000016715	SNRNP48	98	70.349	Tursiops_truncatus
ENSMODG00000009996	SNRNP48	93	72.093	ENSUAMG00000003690	SNRNP48	98	72.093	Ursus_americanus
ENSMODG00000009996	SNRNP48	80	71.088	ENSVPAG00000003557	SNRNP48	99	71.088	Vicugna_pacos
ENSMODG00000009996	SNRNP48	93	71.884	ENSVVUG00000004996	SNRNP48	98	71.884	Vulpes_vulpes
ENSMODG00000009996	SNRNP48	82	57.705	ENSXETG00000020447	snrnp48	82	58.131	Xenopus_tropicalis
ENSMODG00000009996	SNRNP48	65	48.133	ENSXCOG00000004478	snrnp48	72	48.133	Xiphophorus_couchianus
ENSMODG00000009996	SNRNP48	77	47.368	ENSXMAG00000013595	snrnp48	83	47.119	Xiphophorus_maculatus