EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000010193 (Gene tree)
Gene ID: 100029569
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 114835 bases
Position: chr3:514625580-514740414
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000012761	MMR_HSR1	PF01926.23	7.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000012996	-	2797	-	ENSMODP00000012761	368 (aa)	-	F6STB3

Gene Model

Click here to download ENSMODG00000010193's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo05100	Bacterial invasion of epithelial cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000010193's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000010193	-	79	62.069	ENSMODG00000021167	SEPT7	65	62.069
ENSMODG00000010193	-	83	45.130	ENSMODG00000006197	SEPT12	86	45.130
ENSMODG00000010193	-	80	44.444	ENSMODG00000011825	SEPT11	67	44.444
ENSMODG00000010193	-	83	47.712	ENSMODG00000001652	SEPT9	52	47.712
ENSMODG00000010193	-	89	87.768	ENSMODG00000016041	SEPT2	93	87.463

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000010193	-	94	91.908	ENSAPOG00000021616	zgc:63587	99	91.908	Acanthochromis_polyacanthus
ENSMODG00000010193	-	83	92.484	ENSACIG00000006540	zgc:63587	99	92.484	Amphilophus_citrinellus
ENSMODG00000010193	-	94	91.618	ENSAOCG00000015026	zgc:63587	99	91.618	Amphiprion_ocellaris
ENSMODG00000010193	-	94	91.618	ENSAPEG00000017625	zgc:63587	99	91.618	Amphiprion_percula
ENSMODG00000010193	-	94	91.040	ENSATEG00000020519	zgc:63587	99	91.040	Anabas_testudineus
ENSMODG00000010193	-	95	93.143	ENSACAG00000000754	-	100	93.143	Anolis_carolinensis
ENSMODG00000010193	-	95	90.831	ENSACLG00000011287	zgc:63587	100	90.831	Astatotilapia_calliptera
ENSMODG00000010193	-	95	91.429	ENSAMXG00000006164	zgc:63587	96	91.429	Astyanax_mexicanus
ENSMODG00000010193	-	95	93.714	ENSCPBG00000010648	-	100	93.714	Chrysemys_picta_bellii
ENSMODG00000010193	-	94	91.066	ENSCSEG00000019626	zgc:63587	99	91.066	Cynoglossus_semilaevis
ENSMODG00000010193	-	94	90.751	ENSCVAG00000017959	zgc:63587	99	90.751	Cyprinodon_variegatus
ENSMODG00000010193	-	61	92.920	ENSDARG00000017140	zgc:63587	82	92.920	Danio_rerio
ENSMODG00000010193	-	95	91.143	ENSELUG00000009060	zgc:63587	100	91.143	Esox_lucius
ENSMODG00000010193	-	95	93.714	ENSFALG00000008010	-	100	93.714	Ficedula_albicollis
ENSMODG00000010193	-	94	90.462	ENSFHEG00000018583	zgc:63587	99	90.462	Fundulus_heteroclitus
ENSMODG00000010193	-	95	91.143	ENSGMOG00000013563	zgc:63587	100	91.143	Gadus_morhua
ENSMODG00000010193	-	95	93.714	ENSGALG00000001652	SEPT2L	100	93.714	Gallus_gallus
ENSMODG00000010193	-	94	90.462	ENSGAFG00000000805	zgc:63587	99	90.462	Gambusia_affinis
ENSMODG00000010193	-	94	90.751	ENSGACG00000005552	zgc:63587	99	90.751	Gasterosteus_aculeatus
ENSMODG00000010193	-	95	93.714	ENSGAGG00000014380	-	100	93.714	Gopherus_agassizii
ENSMODG00000010193	-	95	90.831	ENSHBUG00000013996	zgc:63587	100	90.831	Haplochromis_burtoni
ENSMODG00000010193	-	94	91.329	ENSHCOG00000005893	zgc:63587	99	91.329	Hippocampus_comes
ENSMODG00000010193	-	94	89.914	ENSKMAG00000003351	zgc:63587	99	89.914	Kryptolebias_marmoratus
ENSMODG00000010193	-	94	90.751	ENSLBEG00000025452	zgc:63587	99	90.751	Labrus_bergylta
ENSMODG00000010193	-	95	87.179	ENSLACG00000015335	zgc:63587	100	87.179	Latimeria_chalumnae
ENSMODG00000010193	-	95	92.000	ENSLOCG00000001793	zgc:63587	100	92.000	Lepisosteus_oculatus
ENSMODG00000010193	-	94	91.618	ENSMAMG00000014467	zgc:63587	99	91.618	Mastacembelus_armatus
ENSMODG00000010193	-	95	90.831	ENSMZEG00005009713	zgc:63587	100	90.831	Maylandia_zebra
ENSMODG00000010193	-	95	81.143	ENSMGAG00000001294	-	100	81.143	Meleagris_gallopavo
ENSMODG00000010193	-	88	90.154	ENSMMOG00000011692	zgc:63587	93	90.154	Mola_mola
ENSMODG00000010193	-	83	92.157	ENSMALG00000020157	zgc:63587	99	92.157	Monopterus_albus
ENSMODG00000010193	-	95	90.831	ENSNBRG00000018582	-	100	90.831	Neolamprologus_brichardi
ENSMODG00000010193	-	95	90.258	ENSONIG00000014408	zgc:63587	100	90.258	Oreochromis_niloticus
ENSMODG00000010193	-	94	90.462	ENSORLG00000002669	zgc:63587	99	90.462	Oryzias_latipes
ENSMODG00000010193	-	94	90.462	ENSORLG00020005356	zgc:63587	99	90.462	Oryzias_latipes_hni
ENSMODG00000010193	-	94	90.462	ENSORLG00015015159	zgc:63587	99	90.462	Oryzias_latipes_hsok
ENSMODG00000010193	-	94	90.751	ENSOMEG00000017925	zgc:63587	99	90.751	Oryzias_melastigma
ENSMODG00000010193	-	95	91.714	ENSPKIG00000024604	zgc:63587	100	91.714	Paramormyrops_kingsleyae
ENSMODG00000010193	-	95	93.143	ENSPSIG00000002946	-	100	93.143	Pelodiscus_sinensis
ENSMODG00000010193	-	84	90.291	ENSPMGG00000018374	zgc:63587	99	90.291	Periophthalmus_magnuspinnatus
ENSMODG00000010193	-	95	97.429	ENSPCIG00000025491	-	100	97.429	Phascolarctos_cinereus
ENSMODG00000010193	-	94	90.751	ENSPFOG00000011730	zgc:63587	99	90.751	Poecilia_formosa
ENSMODG00000010193	-	94	90.751	ENSPLAG00000018604	zgc:63587	99	90.751	Poecilia_latipinna
ENSMODG00000010193	-	94	90.462	ENSPMEG00000004117	zgc:63587	99	90.462	Poecilia_mexicana
ENSMODG00000010193	-	94	90.462	ENSPREG00000011612	zgc:63587	99	90.462	Poecilia_reticulata
ENSMODG00000010193	-	95	90.544	ENSPNYG00000008409	zgc:63587	100	90.544	Pundamilia_nyererei
ENSMODG00000010193	-	95	90.571	ENSPNAG00000000463	zgc:63587	85	92.114	Pygocentrus_nattereri
ENSMODG00000010193	-	95	97.143	ENSSHAG00000011013	-	100	97.143	Sarcophilus_harrisii
ENSMODG00000010193	-	95	91.714	ENSSFOG00015014108	zgc:63587	100	91.714	Scleropages_formosus
ENSMODG00000010193	-	94	91.304	ENSSMAG00000006113	-	99	91.304	Scophthalmus_maximus
ENSMODG00000010193	-	91	92.216	ENSSDUG00000002763	zgc:63587	93	92.216	Seriola_dumerili
ENSMODG00000010193	-	94	91.040	ENSSLDG00000004826	zgc:63587	99	91.040	Seriola_lalandi_dorsalis
ENSMODG00000010193	-	95	93.429	ENSSPUG00000015358	-	100	93.429	Sphenodon_punctatus
ENSMODG00000010193	-	94	91.908	ENSSPAG00000015654	-	99	91.908	Stegastes_partitus
ENSMODG00000010193	-	54	92.462	ENSSPAG00000000807	zgc:63587	63	92.462	Stegastes_partitus
ENSMODG00000010193	-	95	93.143	ENSTGUG00000008445	-	100	93.143	Taeniopygia_guttata
ENSMODG00000010193	-	94	91.329	ENSTRUG00000016492	zgc:63587	99	91.329	Takifugu_rubripes
ENSMODG00000010193	-	94	90.173	ENSTNIG00000015927	zgc:63587	99	90.173	Tetraodon_nigroviridis
ENSMODG00000010193	-	95	92.000	ENSXETG00000018605	sept2-a	99	92.000	Xenopus_tropicalis
ENSMODG00000010193	-	91	89.521	ENSXCOG00000002678	zgc:63587	99	89.521	Xiphophorus_couchianus
ENSMODG00000010193	-	94	90.462	ENSXMAG00000014718	zgc:63587	99	90.462	Xiphophorus_maculatus