EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000010480 (Gene tree)
Gene ID: 100012573
Gene Symbol: PRPF8
Alias: PRPC8|Prp8|RP13|SNRNP220|hPrp8
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 18431 bases
Position: chr2:517151430-517169860
Accession: 100012573
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000013136	RRM_4	PF10598.9	2.5e-48	1	1
ENSMODP00000013136	U5_2-snRNA_bdg	PF10597.9	4.9e-74	1	1
ENSMODP00000013136	PRO8NT	PF08082.11	1e-86	1	1
ENSMODP00000013136	U6-snRNA_bdg	PF10596.9	1.2e-89	1	1
ENSMODP00000013136	PROCN	PF08083.11	1.3e-235	1	1
ENSMODP00000013136	PRP8_domainIV	PF12134.8	5.6e-130	1	1
ENSMODP00000013136	PROCT	PF08084.11	1.5e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000013376	PRPF8-201	7153	XM_001365025	ENSMODP00000013136	2335 (aa)	XP_001365062	F7ESJ6

Gene Model

Click here to download ENSMODG00000010480's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000010480's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000010480	PRPF8	100	99.829	ENSG00000174231	PRPF8	100	99.829	Homo_sapiens
ENSMODG00000010480	PRPF8	100	97.608	ENSAPOG00000010079	prpf8	100	97.608	Acanthochromis_polyacanthus
ENSMODG00000010480	PRPF8	100	99.829	ENSAMEG00000007940	PRPF8	100	99.829	Ailuropoda_melanoleuca
ENSMODG00000010480	PRPF8	100	95.464	ENSACIG00000018280	prpf8	100	95.840	Amphilophus_citrinellus
ENSMODG00000010480	PRPF8	100	97.608	ENSAOCG00000010725	prpf8	100	97.608	Amphiprion_ocellaris
ENSMODG00000010480	PRPF8	100	97.608	ENSAPEG00000014397	prpf8	100	97.608	Amphiprion_percula
ENSMODG00000010480	PRPF8	100	97.053	ENSATEG00000010062	prpf8	100	97.053	Anabas_testudineus
ENSMODG00000010480	PRPF8	96	99.555	ENSAPLG00000010357	PRPF8	100	99.555	Anas_platyrhynchos
ENSMODG00000010480	PRPF8	83	97.425	ENSACAG00000014784	PRPF8	99	97.425	Anolis_carolinensis
ENSMODG00000010480	PRPF8	100	99.829	ENSANAG00000032629	PRPF8	100	99.829	Aotus_nancymaae
ENSMODG00000010480	PRPF8	100	97.362	ENSACLG00000020858	prpf8	100	97.362	Astatotilapia_calliptera
ENSMODG00000010480	PRPF8	100	97.731	ENSAMXG00000020291	prpf8	100	97.731	Astyanax_mexicanus
ENSMODG00000010480	PRPF8	100	99.829	ENSBTAG00000011488	PRPF8	100	99.829	Bos_taurus
ENSMODG00000010480	PRPF8	99	86.595	WBGene00004187	prp-8	99	86.681	Caenorhabditis_elegans
ENSMODG00000010480	PRPF8	100	99.829	ENSCJAG00000001911	PRPF8	100	99.829	Callithrix_jacchus
ENSMODG00000010480	PRPF8	100	99.829	ENSCAFG00000019221	PRPF8	100	99.829	Canis_familiaris
ENSMODG00000010480	PRPF8	96	99.866	ENSCAFG00020009943	PRPF8	100	99.866	Canis_lupus_dingo
ENSMODG00000010480	PRPF8	100	99.829	ENSCHIG00000017499	PRPF8	100	99.829	Capra_hircus
ENSMODG00000010480	PRPF8	100	99.829	ENSTSYG00000014120	PRPF8	100	99.829	Carlito_syrichta
ENSMODG00000010480	PRPF8	96	97.639	ENSCAPG00000009459	PRPF8	99	97.639	Cavia_aperea
ENSMODG00000010480	PRPF8	100	99.829	ENSCPOG00000010379	PRPF8	100	99.829	Cavia_porcellus
ENSMODG00000010480	PRPF8	100	99.829	ENSCCAG00000031983	-	100	99.829	Cebus_capucinus
ENSMODG00000010480	PRPF8	100	99.829	ENSCATG00000038595	PRPF8	100	99.829	Cercocebus_atys
ENSMODG00000010480	PRPF8	100	99.829	ENSCLAG00000004388	PRPF8	100	99.829	Chinchilla_lanigera
ENSMODG00000010480	PRPF8	100	99.829	ENSCSAG00000013929	PRPF8	100	99.829	Chlorocebus_sabaeus
ENSMODG00000010480	PRPF8	81	99.475	ENSCHOG00000008590	PRPF8	88	99.475	Choloepus_hoffmanni
ENSMODG00000010480	PRPF8	100	99.529	ENSCPBG00000020409	PRPF8	100	99.529	Chrysemys_picta_bellii
ENSMODG00000010480	PRPF8	99	92.874	ENSCSAVG00000007825	-	100	91.194	Ciona_savignyi
ENSMODG00000010480	PRPF8	100	99.829	ENSCANG00000043088	PRPF8	100	99.829	Colobus_angolensis_palliatus
ENSMODG00000010480	PRPF8	74	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSMODG00000010480	PRPF8	100	97.649	ENSCSEG00000007905	prpf8	100	97.649	Cynoglossus_semilaevis
ENSMODG00000010480	PRPF8	100	97.609	ENSDARG00000026180	prpf8	100	97.609	Danio_rerio
ENSMODG00000010480	PRPF8	93	99.862	ENSDNOG00000018471	PRPF8	99	99.862	Dasypus_novemcinctus
ENSMODG00000010480	PRPF8	84	99.361	ENSDORG00000006185	Prpf8	96	99.361	Dipodomys_ordii
ENSMODG00000010480	PRPF8	99	91.299	FBgn0033688	Prp8	97	91.299	Drosophila_melanogaster
ENSMODG00000010480	PRPF8	100	94.390	ENSETEG00000017592	PRPF8	100	94.390	Echinops_telfairi
ENSMODG00000010480	PRPF8	99	93.643	ENSEBUG00000006548	prpf8	99	93.643	Eptatretus_burgeri
ENSMODG00000010480	PRPF8	100	99.829	ENSEASG00005009514	PRPF8	100	99.829	Equus_asinus_asinus
ENSMODG00000010480	PRPF8	97	99.868	ENSECAG00000021318	PRPF8	100	99.868	Equus_caballus
ENSMODG00000010480	PRPF8	67	100.000	ENSEEUG00000012120	-	67	100.000	Erinaceus_europaeus
ENSMODG00000010480	PRPF8	98	96.460	ENSELUG00000007120	prpf8	99	96.460	Esox_lucius
ENSMODG00000010480	PRPF8	100	99.829	ENSFCAG00000006297	PRPF8	100	99.829	Felis_catus
ENSMODG00000010480	PRPF8	100	99.486	ENSFALG00000006628	PRPF8	100	99.486	Ficedula_albicollis
ENSMODG00000010480	PRPF8	100	99.829	ENSFDAG00000004711	PRPF8	100	99.829	Fukomys_damarensis
ENSMODG00000010480	PRPF8	100	97.353	ENSFHEG00000021084	prpf8	100	97.353	Fundulus_heteroclitus
ENSMODG00000010480	PRPF8	100	95.389	ENSGMOG00000002028	prpf8	99	95.389	Gadus_morhua
ENSMODG00000010480	PRPF8	100	99.443	ENSGALG00000002943	PRPF8	100	99.443	Gallus_gallus
ENSMODG00000010480	PRPF8	99	97.435	ENSGAFG00000010337	prpf8	99	97.435	Gambusia_affinis
ENSMODG00000010480	PRPF8	100	97.516	ENSGACG00000008504	prpf8	100	97.516	Gasterosteus_aculeatus
ENSMODG00000010480	PRPF8	100	99.529	ENSGAGG00000008350	PRPF8	100	99.529	Gopherus_agassizii
ENSMODG00000010480	PRPF8	100	99.829	ENSGGOG00000005516	PRPF8	100	99.829	Gorilla_gorilla
ENSMODG00000010480	PRPF8	100	97.559	ENSHBUG00000016192	prpf8	100	97.559	Haplochromis_burtoni
ENSMODG00000010480	PRPF8	100	99.829	ENSHGLG00000012029	PRPF8	100	99.829	Heterocephalus_glaber_female
ENSMODG00000010480	PRPF8	100	99.829	ENSHGLG00100016494	PRPF8	100	99.829	Heterocephalus_glaber_male
ENSMODG00000010480	PRPF8	100	97.563	ENSHCOG00000016414	prpf8	100	97.563	Hippocampus_comes
ENSMODG00000010480	PRPF8	100	97.605	ENSIPUG00000023230	prpf8	100	97.605	Ictalurus_punctatus
ENSMODG00000010480	PRPF8	100	99.829	ENSSTOG00000005128	PRPF8	100	99.829	Ictidomys_tridecemlineatus
ENSMODG00000010480	PRPF8	100	97.645	ENSJJAG00000021159	Prpf8	100	97.645	Jaculus_jaculus
ENSMODG00000010480	PRPF8	99	97.852	ENSKMAG00000016118	prpf8	99	97.852	Kryptolebias_marmoratus
ENSMODG00000010480	PRPF8	100	97.478	ENSLBEG00000026903	prpf8	100	97.478	Labrus_bergylta
ENSMODG00000010480	PRPF8	95	96.027	ENSLACG00000010479	PRPF8	99	98.551	Latimeria_chalumnae
ENSMODG00000010480	PRPF8	99	97.819	ENSLOCG00000005409	prpf8	99	97.819	Lepisosteus_oculatus
ENSMODG00000010480	PRPF8	100	99.829	ENSLAFG00000015445	PRPF8	100	99.829	Loxodonta_africana
ENSMODG00000010480	PRPF8	100	99.829	ENSMFAG00000039995	PRPF8	100	99.829	Macaca_fascicularis
ENSMODG00000010480	PRPF8	100	99.829	ENSMMUG00000004820	PRPF8	100	99.829	Macaca_mulatta
ENSMODG00000010480	PRPF8	100	99.829	ENSMNEG00000035713	PRPF8	100	99.829	Macaca_nemestrina
ENSMODG00000010480	PRPF8	100	99.829	ENSMLEG00000037937	PRPF8	100	99.829	Mandrillus_leucophaeus
ENSMODG00000010480	PRPF8	100	97.565	ENSMAMG00000008919	prpf8	100	97.565	Mastacembelus_armatus
ENSMODG00000010480	PRPF8	100	97.362	ENSMZEG00005015073	prpf8	100	97.362	Maylandia_zebra
ENSMODG00000010480	PRPF8	100	99.443	ENSMGAG00000004769	PRPF8	100	99.443	Meleagris_gallopavo
ENSMODG00000010480	PRPF8	100	99.786	ENSMICG00000010320	PRPF8	100	99.786	Microcebus_murinus
ENSMODG00000010480	PRPF8	100	99.786	ENSMOCG00000016838	Prpf8	100	99.786	Microtus_ochrogaster
ENSMODG00000010480	PRPF8	100	97.095	ENSMMOG00000011887	prpf8	100	97.095	Mola_mola
ENSMODG00000010480	PRPF8	97	97.530	ENSMALG00000003558	prpf8	100	97.530	Monopterus_albus
ENSMODG00000010480	PRPF8	100	99.743	MGP_CAROLIEiJ_G0016740	Prpf8	100	99.743	Mus_caroli
ENSMODG00000010480	PRPF8	100	99.743	ENSMUSG00000020850	Prpf8	100	99.743	Mus_musculus
ENSMODG00000010480	PRPF8	100	99.743	MGP_PahariEiJ_G0017877	Prpf8	100	99.743	Mus_pahari
ENSMODG00000010480	PRPF8	100	99.743	MGP_SPRETEiJ_G0017583	Prpf8	100	99.743	Mus_spretus
ENSMODG00000010480	PRPF8	100	99.829	ENSMPUG00000013227	PRPF8	100	99.829	Mustela_putorius_furo
ENSMODG00000010480	PRPF8	100	99.615	ENSMLUG00000002666	PRPF8	100	99.615	Myotis_lucifugus
ENSMODG00000010480	PRPF8	100	98.030	ENSNGAG00000005305	Prpf8	100	98.030	Nannospalax_galili
ENSMODG00000010480	PRPF8	100	97.404	ENSNBRG00000013127	prpf8	100	97.404	Neolamprologus_brichardi
ENSMODG00000010480	PRPF8	97	97.508	ENSNLEG00000000897	PRPF8	98	97.508	Nomascus_leucogenys
ENSMODG00000010480	PRPF8	99	98.175	ENSMEUG00000015999	PRPF8	100	98.175	Notamacropus_eugenii
ENSMODG00000010480	PRPF8	100	98.287	ENSOPRG00000003102	PRPF8	100	98.287	Ochotona_princeps
ENSMODG00000010480	PRPF8	100	99.829	ENSODEG00000008468	PRPF8	100	99.829	Octodon_degus
ENSMODG00000010480	PRPF8	100	97.405	ENSONIG00000008153	prpf8	100	97.405	Oreochromis_niloticus
ENSMODG00000010480	PRPF8	82	99.813	ENSOANG00000004250	PRPF8	97	99.813	Ornithorhynchus_anatinus
ENSMODG00000010480	PRPF8	100	99.829	ENSOCUG00000000081	PRPF8	100	99.829	Oryctolagus_cuniculus
ENSMODG00000010480	PRPF8	99	97.602	ENSORLG00000008036	prpf8	99	97.602	Oryzias_latipes
ENSMODG00000010480	PRPF8	99	97.560	ENSORLG00020021070	prpf8	99	97.560	Oryzias_latipes_hni
ENSMODG00000010480	PRPF8	99	97.602	ENSORLG00015002340	prpf8	99	97.602	Oryzias_latipes_hsok
ENSMODG00000010480	PRPF8	99	96.101	ENSOMEG00000016866	prpf8	99	96.101	Oryzias_melastigma
ENSMODG00000010480	PRPF8	100	99.701	ENSOARG00000013312	PRPF8	100	99.701	Ovis_aries
ENSMODG00000010480	PRPF8	100	99.829	ENSPPAG00000042753	PRPF8	100	99.829	Pan_paniscus
ENSMODG00000010480	PRPF8	100	99.829	ENSPPRG00000008746	PRPF8	100	99.829	Panthera_pardus
ENSMODG00000010480	PRPF8	100	99.743	ENSPTIG00000019200	PRPF8	100	99.743	Panthera_tigris_altaica
ENSMODG00000010480	PRPF8	100	99.829	ENSPTRG00000039576	PRPF8	100	99.829	Pan_troglodytes
ENSMODG00000010480	PRPF8	99	98.928	ENSPANG00000024607	PRPF8	99	98.928	Papio_anubis
ENSMODG00000010480	PRPF8	100	97.319	ENSPKIG00000011201	prpf8	100	97.319	Paramormyrops_kingsleyae
ENSMODG00000010480	PRPF8	100	99.486	ENSPSIG00000013393	PRPF8	100	99.486	Pelodiscus_sinensis
ENSMODG00000010480	PRPF8	100	99.786	ENSPEMG00000021699	Prpf8	100	99.786	Peromyscus_maniculatus_bairdii
ENSMODG00000010480	PRPF8	96	93.764	ENSPMAG00000005438	prpf8	100	93.808	Petromyzon_marinus
ENSMODG00000010480	PRPF8	100	100.000	ENSPCIG00000022603	PRPF8	100	100.000	Phascolarctos_cinereus
ENSMODG00000010480	PRPF8	100	96.905	ENSPFOG00000007005	prpf8	100	96.905	Poecilia_formosa
ENSMODG00000010480	PRPF8	100	96.317	ENSPLAG00000020777	prpf8	100	96.317	Poecilia_latipinna
ENSMODG00000010480	PRPF8	100	96.905	ENSPMEG00000004051	prpf8	100	96.905	Poecilia_mexicana
ENSMODG00000010480	PRPF8	100	97.645	ENSPREG00000021902	prpf8	100	97.645	Poecilia_reticulata
ENSMODG00000010480	PRPF8	100	99.829	ENSPPYG00000007777	PRPF8	100	99.829	Pongo_abelii
ENSMODG00000010480	PRPF8	90	99.529	ENSPCAG00000008938	PRPF8	90	99.529	Procavia_capensis
ENSMODG00000010480	PRPF8	100	99.786	ENSPCOG00000015182	PRPF8	100	99.786	Propithecus_coquereli
ENSMODG00000010480	PRPF8	93	99.653	ENSPVAG00000002134	PRPF8	93	99.653	Pteropus_vampyrus
ENSMODG00000010480	PRPF8	100	97.559	ENSPNYG00000016356	prpf8	100	97.559	Pundamilia_nyererei
ENSMODG00000010480	PRPF8	100	97.648	ENSPNAG00000009247	prpf8	100	97.648	Pygocentrus_nattereri
ENSMODG00000010480	PRPF8	100	99.743	ENSRNOG00000003495	Prpf8	100	99.743	Rattus_norvegicus
ENSMODG00000010480	PRPF8	100	99.829	ENSRBIG00000031219	PRPF8	100	99.829	Rhinopithecus_bieti
ENSMODG00000010480	PRPF8	100	99.829	ENSRROG00000038014	PRPF8	100	99.829	Rhinopithecus_roxellana
ENSMODG00000010480	PRPF8	99	62.473	YHR165C	PRP8	95	62.516	Saccharomyces_cerevisiae
ENSMODG00000010480	PRPF8	100	99.829	ENSSBOG00000029717	PRPF8	100	99.829	Saimiri_boliviensis_boliviensis
ENSMODG00000010480	PRPF8	100	99.957	ENSSHAG00000006167	PRPF8	100	99.957	Sarcophilus_harrisii
ENSMODG00000010480	PRPF8	100	97.438	ENSSFOG00015013905	prpf8	100	97.438	Scleropages_formosus
ENSMODG00000010480	PRPF8	100	97.394	ENSSMAG00000017736	prpf8	100	97.394	Scophthalmus_maximus
ENSMODG00000010480	PRPF8	100	97.565	ENSSDUG00000003029	prpf8	100	97.565	Seriola_dumerili
ENSMODG00000010480	PRPF8	68	98.811	ENSSLDG00000017096	prpf8	100	98.811	Seriola_lalandi_dorsalis
ENSMODG00000010480	PRPF8	87	99.244	ENSSARG00000002892	PRPF8	87	99.244	Sorex_araneus
ENSMODG00000010480	PRPF8	100	99.315	ENSSPUG00000007463	PRPF8	100	99.315	Sphenodon_punctatus
ENSMODG00000010480	PRPF8	100	97.010	ENSSPAG00000015639	prpf8	100	97.010	Stegastes_partitus
ENSMODG00000010480	PRPF8	100	99.829	ENSSSCG00000017817	PRPF8	100	99.829	Sus_scrofa
ENSMODG00000010480	PRPF8	52	99.651	ENSTGUG00000015597	-	95	99.651	Taeniopygia_guttata
ENSMODG00000010480	PRPF8	100	99.486	ENSTGUG00000005648	-	100	99.486	Taeniopygia_guttata
ENSMODG00000010480	PRPF8	100	97.563	ENSTRUG00000015906	prpf8	100	97.563	Takifugu_rubripes
ENSMODG00000010480	PRPF8	95	98.746	ENSTNIG00000003460	prpf8	99	98.746	Tetraodon_nigroviridis
ENSMODG00000010480	PRPF8	93	99.932	ENSTBEG00000006431	PRPF8	93	99.932	Tupaia_belangeri
ENSMODG00000010480	PRPF8	100	99.229	ENSTTRG00000006869	PRPF8	100	99.229	Tursiops_truncatus
ENSMODG00000010480	PRPF8	54	99.290	ENSUAMG00000015644	-	96	99.290	Ursus_americanus
ENSMODG00000010480	PRPF8	100	99.572	ENSUMAG00000009385	PRPF8	100	99.572	Ursus_maritimus
ENSMODG00000010480	PRPF8	71	99.310	ENSVPAG00000006063	-	71	99.310	Vicugna_pacos
ENSMODG00000010480	PRPF8	100	99.829	ENSVVUG00000021695	PRPF8	99	99.829	Vulpes_vulpes
ENSMODG00000010480	PRPF8	100	98.759	ENSXETG00000022259	prpf8	100	98.759	Xenopus_tropicalis
ENSMODG00000010480	PRPF8	100	97.481	ENSXCOG00000012775	prpf8	100	97.481	Xiphophorus_couchianus
ENSMODG00000010480	PRPF8	100	97.523	ENSXMAG00000008505	prpf8	100	97.523	Xiphophorus_maculatus