EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMODG00000010549 (Gene tree)
Gene ID
100018386
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Monodelphis_domestica
Status
putative
Strand
Plus strand
Length
73842 bases
Position
chr2:517336086-517409927
Accession
100018386
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMODP00000013221tRNA_anti-codonPF01336.254.5e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMODT00000013463RPA1-2012929XM_007485760ENSMODP00000013221617 (aa)XP_007485822F6YRP3
Gene Model
Click here to download ENSMODG00000010549's gene model file
Pathways
Pathway IDPathway NameSource
mdo03030DNA replicationKEGG
mdo03420Nucleotide excision repairKEGG
mdo03430Mismatch repairKEGG
mdo03440Homologous recombinationKEGG
mdo03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000010549's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMODG00000010549RPA19961.601ENSAPOG00000011658rpa19962.092Acanthochromis_polyacanthus
ENSMODG00000010549RPA19163.964ENSAPOG00000019409RPA19063.964Acanthochromis_polyacanthus
ENSMODG00000010549RPA19784.411ENSAMEG00000007706RPA19784.411Ailuropoda_melanoleuca
ENSMODG00000010549RPA19558.714ENSACIG00000012881RPA19958.714Amphilophus_citrinellus
ENSMODG00000010549RPA19656.757ENSACIG00000007277rpa110056.757Amphilophus_citrinellus
ENSMODG00000010549RPA19961.338ENSAOCG00000023376rpa110061.790Amphiprion_ocellaris
ENSMODG00000010549RPA19954.009ENSAOCG00000009003RPA110054.977Amphiprion_ocellaris
ENSMODG00000010549RPA19961.501ENSAPEG00000008634rpa19961.962Amphiprion_percula
ENSMODG00000010549RPA19953.823ENSAPEG00000019132RPA110054.042Amphiprion_percula
ENSMODG00000010549RPA19955.046ENSATEG00000006443RPA110055.046Anabas_testudineus
ENSMODG00000010549RPA19463.356ENSATEG00000022024rpa110063.356Anabas_testudineus
ENSMODG00000010549RPA19766.913ENSAPLG00000012442RPA110067.061Anas_platyrhynchos
ENSMODG00000010549RPA19964.839ENSACAG00000014490RPA19964.839Anolis_carolinensis
ENSMODG00000010549RPA19783.721ENSANAG00000023456RPA19983.721Aotus_nancymaae
ENSMODG00000010549RPA19363.194ENSACLG00000006640rpa19963.194Astatotilapia_calliptera
ENSMODG00000010549RPA19956.610ENSACLG00000005223RPA19956.610Astatotilapia_calliptera
ENSMODG00000010549RPA19961.626ENSAMXG00000008418rpa110062.338Astyanax_mexicanus
ENSMODG00000010549RPA19984.228ENSBTAG00000009711RPA19984.228Bos_taurus
ENSMODG00000010549RPA17030.734WBGene00017546rpa-16530.734Caenorhabditis_elegans
ENSMODG00000010549RPA19983.252ENSCJAG00000001848RPA19983.252Callithrix_jacchus
ENSMODG00000010549RPA19984.528ENSCAFG00000019249RPA19984.528Canis_familiaris
ENSMODG00000010549RPA19984.528ENSCAFG00020009847RPA19984.528Canis_lupus_dingo
ENSMODG00000010549RPA19983.577ENSCHIG00000026308RPA19983.577Capra_hircus
ENSMODG00000010549RPA19984.065ENSTSYG00000003482-9984.065Carlito_syrichta
ENSMODG00000010549RPA19982.276ENSCPOG00000000035RPA19982.276Cavia_porcellus
ENSMODG00000010549RPA19972.977ENSCCAG00000010981RPA19972.977Cebus_capucinus
ENSMODG00000010549RPA19982.927ENSCLAG00000005185-10082.927Chinchilla_lanigera
ENSMODG00000010549RPA19978.537ENSCLAG00000015045-9978.537Chinchilla_lanigera
ENSMODG00000010549RPA19972.006ENSCSAG00000013833RPA19972.006Chlorocebus_sabaeus
ENSMODG00000010549RPA17187.643ENSCHOG00000009454-9987.643Choloepus_hoffmanni
ENSMODG00000010549RPA19582.594ENSCHOG00000013540-9982.594Choloepus_hoffmanni
ENSMODG00000010549RPA19980.682ENSCPBG00000020377RPA19981.436Chrysemys_picta_bellii
ENSMODG00000010549RPA19842.351ENSCING00000023482-9842.351Ciona_intestinalis
ENSMODG00000010549RPA19880.100ENSCANG00000030911RPA19980.100Colobus_angolensis_palliatus
ENSMODG00000010549RPA19983.657ENSCGRG00001008197Rpa19983.657Cricetulus_griseus_chok1gshd
ENSMODG00000010549RPA18182.643ENSCGRG00000000582Rpa19982.643Cricetulus_griseus_crigri
ENSMODG00000010549RPA19960.227ENSCSEG00000013066rpa19960.227Cynoglossus_semilaevis
ENSMODG00000010549RPA19952.389ENSCSEG00000012726RPA19854.124Cynoglossus_semilaevis
ENSMODG00000010549RPA19964.052ENSCVAG00000019431rpa110063.668Cyprinodon_variegatus
ENSMODG00000010549RPA19453.594ENSCVAG00000013446-9553.438Cyprinodon_variegatus
ENSMODG00000010549RPA19964.065ENSDARG00000003938rpa110064.065Danio_rerio
ENSMODG00000010549RPA19885.691ENSDNOG00000017218RPA19985.691Dasypus_novemcinctus
ENSMODG00000010549RPA19983.550ENSDORG00000006199Rpa19983.550Dipodomys_ordii
ENSMODG00000010549RPA19841.789FBgn0010173RpA-709842.276Drosophila_melanogaster
ENSMODG00000010549RPA18285.417ENSETEG00000017608RPA18285.417Echinops_telfairi
ENSMODG00000010549RPA19885.314ENSEASG00005009372RPA19885.314Equus_asinus_asinus
ENSMODG00000010549RPA19986.319ENSECAG00000023886RPA19986.319Equus_caballus
ENSMODG00000010549RPA16886.874ENSEEUG00000002186-6886.874Erinaceus_europaeus
ENSMODG00000010549RPA19962.460ENSELUG00000021071rpa110062.621Esox_lucius
ENSMODG00000010549RPA18755.780ENSELUG00000006136RPA19955.780Esox_lucius
ENSMODG00000010549RPA19983.902ENSFCAG00000006306RPA19983.902Felis_catus
ENSMODG00000010549RPA19977.634ENSFALG00000006575RPA19977.634Ficedula_albicollis
ENSMODG00000010549RPA19983.713ENSFDAG00000007720RPA19983.713Fukomys_damarensis
ENSMODG00000010549RPA19962.029ENSFHEG00000003580rpa19962.029Fundulus_heteroclitus
ENSMODG00000010549RPA19959.574ENSGMOG00000010382rpa19959.574Gadus_morhua
ENSMODG00000010549RPA19977.886ENSGALG00000003072RPA19977.886Gallus_gallus
ENSMODG00000010549RPA19962.029ENSGAFG00000012916rpa19962.029Gambusia_affinis
ENSMODG00000010549RPA19954.299ENSGAFG00000020953RPA19954.299Gambusia_affinis
ENSMODG00000010549RPA19961.626ENSGACG00000010856rpa19961.626Gasterosteus_aculeatus
ENSMODG00000010549RPA19980.357ENSGAGG00000013611RPA19980.357Gopherus_agassizii
ENSMODG00000010549RPA19980.782ENSGGOG00000014186RPA19980.782Gorilla_gorilla
ENSMODG00000010549RPA19962.439ENSHBUG00000017773rpa19962.439Haplochromis_burtoni
ENSMODG00000010549RPA19653.923ENSHBUG00000009348RPA19953.923Haplochromis_burtoni
ENSMODG00000010549RPA19983.876ENSHGLG00000008846RPA110083.876Heterocephalus_glaber_female
ENSMODG00000010549RPA19971.010ENSHGLG00100002005-9971.010Heterocephalus_glaber_male
ENSMODG00000010549RPA19983.876ENSHGLG00100017755-10083.876Heterocephalus_glaber_male
ENSMODG00000010549RPA19978.339ENSHGLG00100000799-9978.339Heterocephalus_glaber_male
ENSMODG00000010549RPA19959.935ENSHCOG00000001401rpa19960.323Hippocampus_comes
ENSMODG00000010549RPA19943.317ENSHCOG00000000351RPA19943.317Hippocampus_comes
ENSMODG00000010549RPA19962.439ENSIPUG00000004400rpa19962.439Ictalurus_punctatus
ENSMODG00000010549RPA19778.748ENSSTOG00000022475RPA19878.748Ictidomys_tridecemlineatus
ENSMODG00000010549RPA19583.475ENSJJAG00000000876Rpa19883.475Jaculus_jaculus
ENSMODG00000010549RPA19955.178ENSKMAG00000000234RPA19955.178Kryptolebias_marmoratus
ENSMODG00000010549RPA19961.058ENSKMAG00000005605rpa19961.851Kryptolebias_marmoratus
ENSMODG00000010549RPA19961.338ENSLBEG00000021604rpa19961.338Labrus_bergylta
ENSMODG00000010549RPA19964.318ENSLBEG00000002281RPA18964.318Labrus_bergylta
ENSMODG00000010549RPA18167.992ENSLACG00000007210RPA19967.992Latimeria_chalumnae
ENSMODG00000010549RPA19966.234ENSLOCG00000006397rpa110066.234Lepisosteus_oculatus
ENSMODG00000010549RPA19982.258ENSLAFG00000015354RPA19982.258Loxodonta_africana
ENSMODG00000010549RPA18283.366ENSMFAG00000036138-9983.366Macaca_fascicularis
ENSMODG00000010549RPA19883.582ENSMMUG00000011604-9983.582Macaca_mulatta
ENSMODG00000010549RPA19976.098ENSMMUG00000002442-9976.098Macaca_mulatta
ENSMODG00000010549RPA19078.667ENSMNEG00000029837-9978.667Macaca_nemestrina
ENSMODG00000010549RPA19980.163ENSMNEG00000031632-9980.163Macaca_nemestrina
ENSMODG00000010549RPA19778.017ENSMLEG00000038768-9978.017Mandrillus_leucophaeus
ENSMODG00000010549RPA19962.316ENSMAMG00000017993rpa19962.316Mastacembelus_armatus
ENSMODG00000010549RPA19963.657ENSMAMG00000020097RPA19951.187Mastacembelus_armatus
ENSMODG00000010549RPA19962.439ENSMZEG00005007551rpa19962.439Maylandia_zebra
ENSMODG00000010549RPA19956.610ENSMZEG00005024731RPA19956.610Maylandia_zebra
ENSMODG00000010549RPA19976.634ENSMGAG00000005315RPA19976.634Meleagris_gallopavo
ENSMODG00000010549RPA19784.500ENSMAUG00000010474Rpa19985.191Mesocricetus_auratus
ENSMODG00000010549RPA19983.713ENSMICG00000012867RPA19984.039Microcebus_murinus
ENSMODG00000010549RPA19983.361ENSMOCG00000013019Rpa19983.361Microtus_ochrogaster
ENSMODG00000010549RPA19960.685ENSMMOG00000014292rpa19961.889Mola_mola
ENSMODG00000010549RPA19756.856ENSMMOG00000010868RPA19756.856Mola_mola
ENSMODG00000010549RPA19962.745ENSMALG00000011453rpa19962.908Monopterus_albus
ENSMODG00000010549RPA19363.158ENSMALG00000001208RPA18163.158Monopterus_albus
ENSMODG00000010549RPA19982.468MGP_CAROLIEiJ_G0016734Rpa19982.468Mus_caroli
ENSMODG00000010549RPA19981.029ENSMUSG00000000751Rpa19981.029Mus_musculus
ENSMODG00000010549RPA19983.037MGP_PahariEiJ_G0017871Rpa19983.037Mus_pahari
ENSMODG00000010549RPA19981.059MGP_SPRETEiJ_G0017577Rpa19981.059Mus_spretus
ENSMODG00000010549RPA19984.039ENSMPUG00000013119RPA19984.039Mustela_putorius_furo
ENSMODG00000010549RPA19981.774ENSMLUG00000006113RPA19981.774Myotis_lucifugus
ENSMODG00000010549RPA19583.986ENSNGAG00000004522Rpa19483.986Nannospalax_galili
ENSMODG00000010549RPA19656.081ENSNBRG00000009672RPA19556.081Neolamprologus_brichardi
ENSMODG00000010549RPA19462.995ENSNBRG00000020595rpa19962.995Neolamprologus_brichardi
ENSMODG00000010549RPA19982.899ENSNLEG00000017149RPA19983.415Nomascus_leucogenys
ENSMODG00000010549RPA19883.690ENSMEUG00000006714RPA110083.690Notamacropus_eugenii
ENSMODG00000010549RPA19582.047ENSODEG00000009038RPA19682.047Octodon_degus
ENSMODG00000010549RPA19962.419ENSONIG00000013135rpa19962.419Oreochromis_niloticus
ENSMODG00000010549RPA19884.488ENSOANG00000010880RPA110084.488Ornithorhynchus_anatinus
ENSMODG00000010549RPA19981.085ENSOCUG00000001504RPA19981.085Oryctolagus_cuniculus
ENSMODG00000010549RPA19953.881ENSORLG00000003368RPA19953.881Oryzias_latipes
ENSMODG00000010549RPA19962.908ENSORLG00000004856rpa19962.908Oryzias_latipes
ENSMODG00000010549RPA19952.317ENSORLG00020015284RPA19952.317Oryzias_latipes_hni
ENSMODG00000010549RPA19962.908ENSORLG00020008980rpa19962.908Oryzias_latipes_hni
ENSMODG00000010549RPA16762.500ENSORLG00015005867-9562.500Oryzias_latipes_hsok
ENSMODG00000010549RPA19954.109ENSORLG00015020383RPA19954.109Oryzias_latipes_hsok
ENSMODG00000010549RPA19962.908ENSORLG00015013982rpa19962.908Oryzias_latipes_hsok
ENSMODG00000010549RPA19961.047ENSOMEG00000004704rpa19961.047Oryzias_melastigma
ENSMODG00000010549RPA19854.444ENSOMEG00000011040RPA19957.659Oryzias_melastigma
ENSMODG00000010549RPA19479.649ENSOGAG00000029379-9979.649Otolemur_garnettii
ENSMODG00000010549RPA19983.713ENSOGAG00000005581-9983.713Otolemur_garnettii
ENSMODG00000010549RPA19983.577ENSOARG00000014479RPA19983.577Ovis_aries
ENSMODG00000010549RPA19983.225ENSPPAG00000039680RPA19983.740Pan_paniscus
ENSMODG00000010549RPA19984.065ENSPPRG00000011807RPA19984.065Panthera_pardus
ENSMODG00000010549RPA19983.902ENSPTIG00000007898RPA19983.902Panthera_tigris_altaica
ENSMODG00000010549RPA19983.225ENSPTRG00000008539RPA19983.740Pan_troglodytes
ENSMODG00000010549RPA19983.089ENSPANG00000024592RPA19983.089Papio_anubis
ENSMODG00000010549RPA19462.950ENSPKIG00000008053rpa19463.122Paramormyrops_kingsleyae
ENSMODG00000010549RPA19778.869ENSPSIG00000015617RPA19978.869Pelodiscus_sinensis
ENSMODG00000010549RPA19955.323ENSPMGG00000000543RPA19957.719Periophthalmus_magnuspinnatus
ENSMODG00000010549RPA19960.884ENSPMGG00000011589rpa19961.047Periophthalmus_magnuspinnatus
ENSMODG00000010549RPA19983.524ENSPEMG00000021061Rpa19983.524Peromyscus_maniculatus_bairdii
ENSMODG00000010549RPA110093.215ENSPCIG00000019049RPA110094.346Phascolarctos_cinereus
ENSMODG00000010549RPA19962.193ENSPFOG00000003987rpa19962.193Poecilia_formosa
ENSMODG00000010549RPA19454.662ENSPLAG00000008844-9754.662Poecilia_latipinna
ENSMODG00000010549RPA19961.928ENSPLAG00000004984rpa19961.928Poecilia_latipinna
ENSMODG00000010549RPA19454.823ENSPMEG00000003627-9754.313Poecilia_mexicana
ENSMODG00000010549RPA19962.193ENSPMEG00000020602rpa110062.827Poecilia_mexicana
ENSMODG00000010549RPA19953.097ENSPREG00000010119RPA110052.859Poecilia_reticulata
ENSMODG00000010549RPA19455.095ENSPREG00000010174rpa19655.095Poecilia_reticulata
ENSMODG00000010549RPA19984.202ENSPCOG00000001799RPA19984.202Propithecus_coquereli
ENSMODG00000010549RPA19983.713ENSPVAG00000002149RPA19983.713Pteropus_vampyrus
ENSMODG00000010549RPA19962.602ENSPNYG00000016316rpa110063.149Pundamilia_nyererei
ENSMODG00000010549RPA19956.299ENSPNYG00000024165RPA19956.299Pundamilia_nyererei
ENSMODG00000010549RPA19854.651ENSPNAG00000008599rpa110053.280Pygocentrus_nattereri
ENSMODG00000010549RPA19786.957ENSRNOG00000003123Rpa19984.339Rattus_norvegicus
ENSMODG00000010549RPA19982.602ENSRBIG00000036587RPA19982.602Rhinopithecus_bieti
ENSMODG00000010549RPA19976.748ENSRROG00000043278RPA19976.748Rhinopithecus_roxellana
ENSMODG00000010549RPA19732.516YAR007CRFA19732.516Saccharomyces_cerevisiae
ENSMODG00000010549RPA19879.801ENSSBOG00000030233RPA19979.801Saimiri_boliviensis_boliviensis
ENSMODG00000010549RPA19995.765ENSSHAG00000007969RPA19995.765Sarcophilus_harrisii
ENSMODG00000010549RPA19963.740ENSSFOG00015005362rpa19263.740Scleropages_formosus
ENSMODG00000010549RPA19953.003ENSSMAG00000019746RPA110053.003Scophthalmus_maximus
ENSMODG00000010549RPA19963.295ENSSDUG00000011949rpa19963.295Seriola_dumerili
ENSMODG00000010549RPA19952.562ENSSDUG00000016358RPA16665.111Seriola_dumerili
ENSMODG00000010549RPA19962.745ENSSLDG00000011806rpa19962.745Seriola_lalandi_dorsalis
ENSMODG00000010549RPA18966.512ENSSLDG00000020784RPA19065.101Seriola_lalandi_dorsalis
ENSMODG00000010549RPA19866.169ENSSARG00000007506RPA19966.169Sorex_araneus
ENSMODG00000010549RPA19676.510ENSSPUG00000007223RPA19976.510Sphenodon_punctatus
ENSMODG00000010549RPA19957.468ENSSPAG00000011165RPA19957.468Stegastes_partitus
ENSMODG00000010549RPA19961.765ENSSPAG00000009903rpa19961.765Stegastes_partitus
ENSMODG00000010549RPA19784.053ENSSSCG00000017822RPA19984.053Sus_scrofa
ENSMODG00000010549RPA19978.049ENSTGUG00000005775RPA19978.049Taeniopygia_guttata
ENSMODG00000010549RPA19863.487ENSTRUG00000003616rpa19963.487Takifugu_rubripes
ENSMODG00000010549RPA19963.084ENSTRUG00000000405RPA18862.500Takifugu_rubripes
ENSMODG00000010549RPA19964.401ENSTNIG00000016199rpa19964.401Tetraodon_nigroviridis
ENSMODG00000010549RPA17890.476ENSTBEG00000002709RPA18190.476Tupaia_belangeri
ENSMODG00000010549RPA19984.553ENSTTRG00000001169RPA19984.553Tursiops_truncatus
ENSMODG00000010549RPA18890.385ENSUAMG00000015676RPA19790.385Ursus_americanus
ENSMODG00000010549RPA19984.039ENSUMAG00000009328RPA19984.039Ursus_maritimus
ENSMODG00000010549RPA19980.976ENSVPAG00000009443RPA19980.976Vicugna_pacos
ENSMODG00000010549RPA19984.528ENSVVUG00000021715RPA19984.528Vulpes_vulpes
ENSMODG00000010549RPA19972.668ENSXETG00000013538rpa19973.486Xenopus_tropicalis
ENSMODG00000010549RPA19556.678ENSXCOG00000009899-9956.678Xiphophorus_couchianus
ENSMODG00000010549RPA19061.664ENSXCOG00000010068rpa19461.664Xiphophorus_couchianus
ENSMODG00000010549RPA19951.494ENSXMAG00000010333RPA18961.715Xiphophorus_maculatus
ENSMODG00000010549RPA19961.047ENSXMAG00000004102rpa110062.522Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us