EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • Orthologs
Description
Ensembl ID
ENSMODG00000010549 (Gene tree)
Gene ID
100018386
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Monodelphis_domestica
Status
putative
Strand
Plus strand
Length
73842 bases
Position
chr2:517336086-517409927
Accession
100018386
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMODP00000013221tRNA_anti-codonPF01336.254.5e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMODT00000013463RPA1-2012929XM_007485760ENSMODP00000013221617 (aa)XP_007485822F6YRP3
Gene Model
Click here to download ENSMODG00000010549's gene model file
Pathways
Pathway IDPathway NameSource
mdo03030DNA replicationKEGG
mdo03420Nucleotide excision repairKEGG
mdo03430Mismatch repairKEGG
mdo03440Homologous recombinationKEGG
mdo03460Fanconi anemia pathwayKEGG
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMODG00000010549RPA19961.601ENSAPOG00000011658rpa19962.092Acanthochromis_polyacanthus
ENSMODG00000010549RPA19163.964ENSAPOG00000019409RPA19063.964Acanthochromis_polyacanthus
ENSMODG00000010549RPA19784.411ENSAMEG00000007706RPA19784.411Ailuropoda_melanoleuca
ENSMODG00000010549RPA19558.714ENSACIG00000012881RPA19958.714Amphilophus_citrinellus
ENSMODG00000010549RPA19656.757ENSACIG00000007277rpa110056.757Amphilophus_citrinellus
ENSMODG00000010549RPA19961.338ENSAOCG00000023376rpa110061.790Amphiprion_ocellaris
ENSMODG00000010549RPA19954.009ENSAOCG00000009003RPA110054.977Amphiprion_ocellaris
ENSMODG00000010549RPA19961.501ENSAPEG00000008634rpa19961.962Amphiprion_percula
ENSMODG00000010549RPA19953.823ENSAPEG00000019132RPA110054.042Amphiprion_percula
ENSMODG00000010549RPA19955.046ENSATEG00000006443RPA110055.046Anabas_testudineus
ENSMODG00000010549RPA19463.356ENSATEG00000022024rpa110063.356Anabas_testudineus
ENSMODG00000010549RPA19766.913ENSAPLG00000012442RPA110067.061Anas_platyrhynchos
ENSMODG00000010549RPA19964.839ENSACAG00000014490RPA19964.839Anolis_carolinensis
ENSMODG00000010549RPA19783.721ENSANAG00000023456RPA19983.721Aotus_nancymaae
ENSMODG00000010549RPA19363.194ENSACLG00000006640rpa19963.194Astatotilapia_calliptera
ENSMODG00000010549RPA19956.610ENSACLG00000005223RPA19956.610Astatotilapia_calliptera
ENSMODG00000010549RPA19961.626ENSAMXG00000008418rpa110062.338Astyanax_mexicanus
ENSMODG00000010549RPA19984.228ENSBTAG00000009711RPA19984.228Bos_taurus
ENSMODG00000010549RPA17030.734WBGene00017546rpa-16530.734Caenorhabditis_elegans
ENSMODG00000010549RPA19983.252ENSCJAG00000001848RPA19983.252Callithrix_jacchus
ENSMODG00000010549RPA19984.528ENSCAFG00000019249RPA19984.528Canis_familiaris
ENSMODG00000010549RPA19984.528ENSCAFG00020009847RPA19984.528Canis_lupus_dingo
ENSMODG00000010549RPA19983.577ENSCHIG00000026308RPA19983.577Capra_hircus
ENSMODG00000010549RPA19984.065ENSTSYG00000003482-9984.065Carlito_syrichta
ENSMODG00000010549RPA19982.276ENSCPOG00000000035RPA19982.276Cavia_porcellus
ENSMODG00000010549RPA19972.977ENSCCAG00000010981RPA19972.977Cebus_capucinus
ENSMODG00000010549RPA19982.927ENSCLAG00000005185-10082.927Chinchilla_lanigera
ENSMODG00000010549RPA19978.537ENSCLAG00000015045-9978.537Chinchilla_lanigera
ENSMODG00000010549RPA19972.006ENSCSAG00000013833RPA19972.006Chlorocebus_sabaeus
ENSMODG00000010549RPA17187.643ENSCHOG00000009454-9987.643Choloepus_hoffmanni
ENSMODG00000010549RPA19582.594ENSCHOG00000013540-9982.594Choloepus_hoffmanni
ENSMODG00000010549RPA19980.682ENSCPBG00000020377RPA19981.436Chrysemys_picta_bellii
ENSMODG00000010549RPA19842.351ENSCING00000023482-9842.351Ciona_intestinalis
ENSMODG00000010549RPA19880.100ENSCANG00000030911RPA19980.100Colobus_angolensis_palliatus
ENSMODG00000010549RPA19983.657ENSCGRG00001008197Rpa19983.657Cricetulus_griseus_chok1gshd
ENSMODG00000010549RPA18182.643ENSCGRG00000000582Rpa19982.643Cricetulus_griseus_crigri
ENSMODG00000010549RPA19960.227ENSCSEG00000013066rpa19960.227Cynoglossus_semilaevis
ENSMODG00000010549RPA19952.389ENSCSEG00000012726RPA19854.124Cynoglossus_semilaevis
ENSMODG00000010549RPA19964.052ENSCVAG00000019431rpa110063.668Cyprinodon_variegatus
ENSMODG00000010549RPA19453.594ENSCVAG00000013446-9553.438Cyprinodon_variegatus
ENSMODG00000010549RPA19964.065ENSDARG00000003938rpa110064.065Danio_rerio
ENSMODG00000010549RPA19885.691ENSDNOG00000017218RPA19985.691Dasypus_novemcinctus
ENSMODG00000010549RPA19983.550ENSDORG00000006199Rpa19983.550Dipodomys_ordii
ENSMODG00000010549RPA19841.789FBgn0010173RpA-709842.276Drosophila_melanogaster
ENSMODG00000010549RPA18285.417ENSETEG00000017608RPA18285.417Echinops_telfairi
ENSMODG00000010549RPA19885.314ENSEASG00005009372RPA19885.314Equus_asinus_asinus
ENSMODG00000010549RPA19986.319ENSECAG00000023886RPA19986.319Equus_caballus
ENSMODG00000010549RPA16886.874ENSEEUG00000002186-6886.874Erinaceus_europaeus
ENSMODG00000010549RPA19962.460ENSELUG00000021071rpa110062.621Esox_lucius
ENSMODG00000010549RPA18755.780ENSELUG00000006136RPA19955.780Esox_lucius
ENSMODG00000010549RPA19983.902ENSFCAG00000006306RPA19983.902Felis_catus
ENSMODG00000010549RPA19977.634ENSFALG00000006575RPA19977.634Ficedula_albicollis
ENSMODG00000010549RPA19983.713ENSFDAG00000007720RPA19983.713Fukomys_damarensis
ENSMODG00000010549RPA19962.029ENSFHEG00000003580rpa19962.029Fundulus_heteroclitus
ENSMODG00000010549RPA19959.574ENSGMOG00000010382rpa19959.574Gadus_morhua
ENSMODG00000010549RPA19977.886ENSGALG00000003072RPA19977.886Gallus_gallus
ENSMODG00000010549RPA19962.029ENSGAFG00000012916rpa19962.029Gambusia_affinis
ENSMODG00000010549RPA19954.299ENSGAFG00000020953RPA19954.299Gambusia_affinis
ENSMODG00000010549RPA19961.626ENSGACG00000010856rpa19961.626Gasterosteus_aculeatus
ENSMODG00000010549RPA19980.357ENSGAGG00000013611RPA19980.357Gopherus_agassizii
ENSMODG00000010549RPA19980.782ENSGGOG00000014186RPA19980.782Gorilla_gorilla
ENSMODG00000010549RPA19962.439ENSHBUG00000017773rpa19962.439Haplochromis_burtoni
ENSMODG00000010549RPA19653.923ENSHBUG00000009348RPA19953.923Haplochromis_burtoni
ENSMODG00000010549RPA19983.876ENSHGLG00000008846RPA110083.876Heterocephalus_glaber_female
ENSMODG00000010549RPA19971.010ENSHGLG00100002005-9971.010Heterocephalus_glaber_male
ENSMODG00000010549RPA19983.876ENSHGLG00100017755-10083.876Heterocephalus_glaber_male
ENSMODG00000010549RPA19978.339ENSHGLG00100000799-9978.339Heterocephalus_glaber_male
ENSMODG00000010549RPA19959.935ENSHCOG00000001401rpa19960.323Hippocampus_comes
ENSMODG00000010549RPA19943.317ENSHCOG00000000351RPA19943.317Hippocampus_comes
ENSMODG00000010549RPA19962.439ENSIPUG00000004400rpa19962.439Ictalurus_punctatus
ENSMODG00000010549RPA19778.748ENSSTOG00000022475RPA19878.748Ictidomys_tridecemlineatus
ENSMODG00000010549RPA19583.475ENSJJAG00000000876Rpa19883.475Jaculus_jaculus
ENSMODG00000010549RPA19955.178ENSKMAG00000000234RPA19955.178Kryptolebias_marmoratus
ENSMODG00000010549RPA19961.058ENSKMAG00000005605rpa19961.851Kryptolebias_marmoratus
ENSMODG00000010549RPA19961.338ENSLBEG00000021604rpa19961.338Labrus_bergylta
ENSMODG00000010549RPA19964.318ENSLBEG00000002281RPA18964.318Labrus_bergylta
ENSMODG00000010549RPA18167.992ENSLACG00000007210RPA19967.992Latimeria_chalumnae
ENSMODG00000010549RPA19966.234ENSLOCG00000006397rpa110066.234Lepisosteus_oculatus
ENSMODG00000010549RPA19982.258ENSLAFG00000015354RPA19982.258Loxodonta_africana
ENSMODG00000010549RPA18283.366ENSMFAG00000036138-9983.366Macaca_fascicularis
ENSMODG00000010549RPA19883.582ENSMMUG00000011604-9983.582Macaca_mulatta
ENSMODG00000010549RPA19976.098ENSMMUG00000002442-9976.098Macaca_mulatta
ENSMODG00000010549RPA19078.667ENSMNEG00000029837-9978.667Macaca_nemestrina
ENSMODG00000010549RPA19980.163ENSMNEG00000031632-9980.163Macaca_nemestrina
ENSMODG00000010549RPA19778.017ENSMLEG00000038768-9978.017Mandrillus_leucophaeus
ENSMODG00000010549RPA19962.316ENSMAMG00000017993rpa19962.316Mastacembelus_armatus
ENSMODG00000010549RPA19963.657ENSMAMG00000020097RPA19951.187Mastacembelus_armatus
ENSMODG00000010549RPA19962.439ENSMZEG00005007551rpa19962.439Maylandia_zebra
ENSMODG00000010549RPA19956.610ENSMZEG00005024731RPA19956.610Maylandia_zebra
ENSMODG00000010549RPA19976.634ENSMGAG00000005315RPA19976.634Meleagris_gallopavo
ENSMODG00000010549RPA19784.500ENSMAUG00000010474Rpa19985.191Mesocricetus_auratus
ENSMODG00000010549RPA19983.713ENSMICG00000012867RPA19984.039Microcebus_murinus
ENSMODG00000010549RPA19983.361ENSMOCG00000013019Rpa19983.361Microtus_ochrogaster
ENSMODG00000010549RPA19960.685ENSMMOG00000014292rpa19961.889Mola_mola
ENSMODG00000010549RPA19756.856ENSMMOG00000010868RPA19756.856Mola_mola
ENSMODG00000010549RPA19962.745ENSMALG00000011453rpa19962.908Monopterus_albus
ENSMODG00000010549RPA19363.158ENSMALG00000001208RPA18163.158Monopterus_albus
ENSMODG00000010549RPA19982.468MGP_CAROLIEiJ_G0016734Rpa19982.468Mus_caroli
ENSMODG00000010549RPA19981.029ENSMUSG00000000751Rpa19981.029Mus_musculus
ENSMODG00000010549RPA19983.037MGP_PahariEiJ_G0017871Rpa19983.037Mus_pahari
ENSMODG00000010549RPA19981.059MGP_SPRETEiJ_G0017577Rpa19981.059Mus_spretus
ENSMODG00000010549RPA19984.039ENSMPUG00000013119RPA19984.039Mustela_putorius_furo
ENSMODG00000010549RPA19981.774ENSMLUG00000006113RPA19981.774Myotis_lucifugus
ENSMODG00000010549RPA19583.986ENSNGAG00000004522Rpa19483.986Nannospalax_galili
ENSMODG00000010549RPA19656.081ENSNBRG00000009672RPA19556.081Neolamprologus_brichardi
ENSMODG00000010549RPA19462.995ENSNBRG00000020595rpa19962.995Neolamprologus_brichardi
ENSMODG00000010549RPA19982.899ENSNLEG00000017149RPA19983.415Nomascus_leucogenys
ENSMODG00000010549RPA19883.690ENSMEUG00000006714RPA110083.690Notamacropus_eugenii
ENSMODG00000010549RPA19582.047ENSODEG00000009038RPA19682.047Octodon_degus
ENSMODG00000010549RPA19962.419ENSONIG00000013135rpa19962.419Oreochromis_niloticus
ENSMODG00000010549RPA19884.488ENSOANG00000010880RPA110084.488Ornithorhynchus_anatinus
ENSMODG00000010549RPA19981.085ENSOCUG00000001504RPA19981.085Oryctolagus_cuniculus
ENSMODG00000010549RPA19953.881ENSORLG00000003368RPA19953.881Oryzias_latipes
ENSMODG00000010549RPA19962.908ENSORLG00000004856rpa19962.908Oryzias_latipes
ENSMODG00000010549RPA19952.317ENSORLG00020015284RPA19952.317Oryzias_latipes_hni
ENSMODG00000010549RPA19962.908ENSORLG00020008980rpa19962.908Oryzias_latipes_hni
ENSMODG00000010549RPA16762.500ENSORLG00015005867-9562.500Oryzias_latipes_hsok
ENSMODG00000010549RPA19954.109ENSORLG00015020383RPA19954.109Oryzias_latipes_hsok
ENSMODG00000010549RPA19962.908ENSORLG00015013982rpa19962.908Oryzias_latipes_hsok
ENSMODG00000010549RPA19961.047ENSOMEG00000004704rpa19961.047Oryzias_melastigma
ENSMODG00000010549RPA19854.444ENSOMEG00000011040RPA19957.659Oryzias_melastigma
ENSMODG00000010549RPA19479.649ENSOGAG00000029379-9979.649Otolemur_garnettii
ENSMODG00000010549RPA19983.713ENSOGAG00000005581-9983.713Otolemur_garnettii
ENSMODG00000010549RPA19983.577ENSOARG00000014479RPA19983.577Ovis_aries
ENSMODG00000010549RPA19983.225ENSPPAG00000039680RPA19983.740Pan_paniscus
ENSMODG00000010549RPA19984.065ENSPPRG00000011807RPA19984.065Panthera_pardus
ENSMODG00000010549RPA19983.902ENSPTIG00000007898RPA19983.902Panthera_tigris_altaica
ENSMODG00000010549RPA19983.225ENSPTRG00000008539RPA19983.740Pan_troglodytes
ENSMODG00000010549RPA19983.089ENSPANG00000024592RPA19983.089Papio_anubis
ENSMODG00000010549RPA19462.950ENSPKIG00000008053rpa19463.122Paramormyrops_kingsleyae
ENSMODG00000010549RPA19778.869ENSPSIG00000015617RPA19978.869Pelodiscus_sinensis
ENSMODG00000010549RPA19955.323ENSPMGG00000000543RPA19957.719Periophthalmus_magnuspinnatus
ENSMODG00000010549RPA19960.884ENSPMGG00000011589rpa19961.047Periophthalmus_magnuspinnatus
ENSMODG00000010549RPA19983.524ENSPEMG00000021061Rpa19983.524Peromyscus_maniculatus_bairdii
ENSMODG00000010549RPA110093.215ENSPCIG00000019049RPA110094.346Phascolarctos_cinereus
ENSMODG00000010549RPA19962.193ENSPFOG00000003987rpa19962.193Poecilia_formosa
ENSMODG00000010549RPA19454.662ENSPLAG00000008844-9754.662Poecilia_latipinna
ENSMODG00000010549RPA19961.928ENSPLAG00000004984rpa19961.928Poecilia_latipinna
ENSMODG00000010549RPA19454.823ENSPMEG00000003627-9754.313Poecilia_mexicana
ENSMODG00000010549RPA19962.193ENSPMEG00000020602rpa110062.827Poecilia_mexicana
ENSMODG00000010549RPA19953.097ENSPREG00000010119RPA110052.859Poecilia_reticulata
ENSMODG00000010549RPA19455.095ENSPREG00000010174rpa19655.095Poecilia_reticulata
ENSMODG00000010549RPA19984.202ENSPCOG00000001799RPA19984.202Propithecus_coquereli
ENSMODG00000010549RPA19983.713ENSPVAG00000002149RPA19983.713Pteropus_vampyrus
ENSMODG00000010549RPA19962.602ENSPNYG00000016316rpa110063.149Pundamilia_nyererei
ENSMODG00000010549RPA19956.299ENSPNYG00000024165RPA19956.299Pundamilia_nyererei
ENSMODG00000010549RPA19854.651ENSPNAG00000008599rpa110053.280Pygocentrus_nattereri
ENSMODG00000010549RPA19786.957ENSRNOG00000003123Rpa19984.339Rattus_norvegicus
ENSMODG00000010549RPA19982.602ENSRBIG00000036587RPA19982.602Rhinopithecus_bieti
ENSMODG00000010549RPA19976.748ENSRROG00000043278RPA19976.748Rhinopithecus_roxellana
ENSMODG00000010549RPA19732.516YAR007CRFA19732.516Saccharomyces_cerevisiae
ENSMODG00000010549RPA19879.801ENSSBOG00000030233RPA19979.801Saimiri_boliviensis_boliviensis
ENSMODG00000010549RPA19995.765ENSSHAG00000007969RPA19995.765Sarcophilus_harrisii
ENSMODG00000010549RPA19963.740ENSSFOG00015005362rpa19263.740Scleropages_formosus
ENSMODG00000010549RPA19953.003ENSSMAG00000019746RPA110053.003Scophthalmus_maximus
ENSMODG00000010549RPA19963.295ENSSDUG00000011949rpa19963.295Seriola_dumerili
ENSMODG00000010549RPA19952.562ENSSDUG00000016358RPA16665.111Seriola_dumerili
ENSMODG00000010549RPA19962.745ENSSLDG00000011806rpa19962.745Seriola_lalandi_dorsalis
ENSMODG00000010549RPA18966.512ENSSLDG00000020784RPA19065.101Seriola_lalandi_dorsalis
ENSMODG00000010549RPA19866.169ENSSARG00000007506RPA19966.169Sorex_araneus
ENSMODG00000010549RPA19676.510ENSSPUG00000007223RPA19976.510Sphenodon_punctatus
ENSMODG00000010549RPA19957.468ENSSPAG00000011165RPA19957.468Stegastes_partitus
ENSMODG00000010549RPA19961.765ENSSPAG00000009903rpa19961.765Stegastes_partitus
ENSMODG00000010549RPA19784.053ENSSSCG00000017822RPA19984.053Sus_scrofa
ENSMODG00000010549RPA19978.049ENSTGUG00000005775RPA19978.049Taeniopygia_guttata
ENSMODG00000010549RPA19863.487ENSTRUG00000003616rpa19963.487Takifugu_rubripes
ENSMODG00000010549RPA19963.084ENSTRUG00000000405RPA18862.500Takifugu_rubripes
ENSMODG00000010549RPA19964.401ENSTNIG00000016199rpa19964.401Tetraodon_nigroviridis
ENSMODG00000010549RPA17890.476ENSTBEG00000002709RPA18190.476Tupaia_belangeri
ENSMODG00000010549RPA19984.553ENSTTRG00000001169RPA19984.553Tursiops_truncatus
ENSMODG00000010549RPA18890.385ENSUAMG00000015676RPA19790.385Ursus_americanus
ENSMODG00000010549RPA19984.039ENSUMAG00000009328RPA19984.039Ursus_maritimus
ENSMODG00000010549RPA19980.976ENSVPAG00000009443RPA19980.976Vicugna_pacos
ENSMODG00000010549RPA19984.528ENSVVUG00000021715RPA19984.528Vulpes_vulpes
ENSMODG00000010549RPA19972.668ENSXETG00000013538rpa19973.486Xenopus_tropicalis
ENSMODG00000010549RPA19556.678ENSXCOG00000009899-9956.678Xiphophorus_couchianus
ENSMODG00000010549RPA19061.664ENSXCOG00000010068rpa19461.664Xiphophorus_couchianus
ENSMODG00000010549RPA19951.494ENSXMAG00000010333RPA18961.715Xiphophorus_maculatus
ENSMODG00000010549RPA19961.047ENSXMAG00000004102rpa110062.522Xiphophorus_maculatus

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