EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000011619 (Gene tree)
Gene ID: 100027314
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 6112 bases
Position: chr3:447244679-447250790
Accession: 100027314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000014541	TRM	PF02005.16	6.4e-146	1	1
ENSMODP00000014541	Met_10	PF02475.16	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000014809	TRMT1-201	2086	XM_001377605	ENSMODP00000014541	610 (aa)	XP_001377642	F6UGF2

Gene Model

Click here to download ENSMODG00000011619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000011619's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000011619	TRMT1	98	76.568	ENSG00000104907	TRMT1	100	85.864	Homo_sapiens
ENSMODG00000011619	TRMT1	99	75.566	ENSAMEG00000012598	TRMT1	92	75.566	Ailuropoda_melanoleuca
ENSMODG00000011619	TRMT1	97	58.155	ENSACIG00000018680	trmt1	93	58.155	Amphilophus_citrinellus
ENSMODG00000011619	TRMT1	95	66.096	ENSAOCG00000006781	trmt1	88	66.096	Amphiprion_ocellaris
ENSMODG00000011619	TRMT1	95	66.096	ENSAPEG00000007712	trmt1	88	66.096	Amphiprion_percula
ENSMODG00000011619	TRMT1	98	65.296	ENSATEG00000001872	trmt1	89	65.296	Anabas_testudineus
ENSMODG00000011619	TRMT1	93	68.586	ENSACAG00000003825	TRMT1	93	68.586	Anolis_carolinensis
ENSMODG00000011619	TRMT1	97	74.542	ENSANAG00000023016	TRMT1	96	74.542	Aotus_nancymaae
ENSMODG00000011619	TRMT1	97	62.795	ENSACLG00000010073	trmt1	97	62.795	Astatotilapia_calliptera
ENSMODG00000011619	TRMT1	93	68.111	ENSAMXG00000012026	trmt1	86	68.111	Astyanax_mexicanus
ENSMODG00000011619	TRMT1	100	75.845	ENSBTAG00000019325	TRMT1	88	75.845	Bos_taurus
ENSMODG00000011619	TRMT1	85	41.541	WBGene00006613	trm-1	96	41.541	Caenorhabditis_elegans
ENSMODG00000011619	TRMT1	99	71.729	ENSCJAG00000004566	TRMT1	94	71.729	Callithrix_jacchus
ENSMODG00000011619	TRMT1	99	76.375	ENSCAFG00000017070	TRMT1	96	76.375	Canis_familiaris
ENSMODG00000011619	TRMT1	99	75.689	ENSCAFG00020005397	TRMT1	91	76.134	Canis_lupus_dingo
ENSMODG00000011619	TRMT1	100	75.402	ENSCHIG00000013569	TRMT1	93	75.402	Capra_hircus
ENSMODG00000011619	TRMT1	99	71.774	ENSTSYG00000003207	TRMT1	93	71.774	Carlito_syrichta
ENSMODG00000011619	TRMT1	88	72.744	ENSCAPG00000003355	TRMT1	95	72.744	Cavia_aperea
ENSMODG00000011619	TRMT1	97	74.419	ENSCPOG00000011754	TRMT1	90	74.419	Cavia_porcellus
ENSMODG00000011619	TRMT1	95	75.000	ENSCCAG00000022263	TRMT1	94	75.000	Cebus_capucinus
ENSMODG00000011619	TRMT1	99	75.365	ENSCATG00000039850	TRMT1	93	75.365	Cercocebus_atys
ENSMODG00000011619	TRMT1	85	64.211	ENSCATG00000038220	-	92	64.211	Cercocebus_atys
ENSMODG00000011619	TRMT1	99	74.430	ENSCLAG00000015295	TRMT1	95	71.452	Chinchilla_lanigera
ENSMODG00000011619	TRMT1	80	79.200	ENSCSAG00000006500	TRMT1	94	79.200	Chlorocebus_sabaeus
ENSMODG00000011619	TRMT1	98	68.657	ENSCPBG00000023866	TRMT1	89	68.657	Chrysemys_picta_bellii
ENSMODG00000011619	TRMT1	88	46.409	ENSCING00000002884	-	96	46.409	Ciona_intestinalis
ENSMODG00000011619	TRMT1	88	48.545	ENSCSAVG00000010927	-	100	47.810	Ciona_savignyi
ENSMODG00000011619	TRMT1	98	61.211	ENSCANG00000040631	TRMT1	92	61.211	Colobus_angolensis_palliatus
ENSMODG00000011619	TRMT1	95	59.114	ENSCANG00000031650	-	90	59.114	Colobus_angolensis_palliatus
ENSMODG00000011619	TRMT1	98	75.908	ENSCGRG00001022594	Trmt1	93	75.908	Cricetulus_griseus_chok1gshd
ENSMODG00000011619	TRMT1	98	75.908	ENSCGRG00000017732	Trmt1	91	75.908	Cricetulus_griseus_crigri
ENSMODG00000011619	TRMT1	96	65.116	ENSCSEG00000001643	trmt1	88	67.096	Cynoglossus_semilaevis
ENSMODG00000011619	TRMT1	94	68.048	ENSCVAG00000011886	trmt1	88	68.048	Cyprinodon_variegatus
ENSMODG00000011619	TRMT1	93	66.609	ENSDARG00000010978	trmt1	86	66.609	Danio_rerio
ENSMODG00000011619	TRMT1	87	52.030	ENSDNOG00000048240	-	92	52.030	Dasypus_novemcinctus
ENSMODG00000011619	TRMT1	100	72.347	ENSDORG00000014298	Trmt1	94	72.347	Dipodomys_ordii
ENSMODG00000011619	TRMT1	84	50.096	FBgn0032430	CG6388	89	50.096	Drosophila_melanogaster
ENSMODG00000011619	TRMT1	87	52.552	ENSEBUG00000003449	trmt1	78	52.632	Eptatretus_burgeri
ENSMODG00000011619	TRMT1	99	75.772	ENSEASG00005004050	TRMT1	96	75.772	Equus_asinus_asinus
ENSMODG00000011619	TRMT1	99	75.772	ENSECAG00000016149	TRMT1	96	75.772	Equus_caballus
ENSMODG00000011619	TRMT1	64	64.810	ENSEEUG00000014102	-	100	64.810	Erinaceus_europaeus
ENSMODG00000011619	TRMT1	92	65.505	ENSELUG00000021659	trmt1	85	65.505	Esox_lucius
ENSMODG00000011619	TRMT1	98	77.288	ENSFCAG00000000483	TRMT1	92	77.288	Felis_catus
ENSMODG00000011619	TRMT1	99	72.625	ENSFDAG00000007386	TRMT1	93	72.625	Fukomys_damarensis
ENSMODG00000011619	TRMT1	83	70.623	ENSFHEG00000012865	trmt1	86	70.428	Fundulus_heteroclitus
ENSMODG00000011619	TRMT1	92	60.739	ENSGMOG00000006564	trmt1	98	60.739	Gadus_morhua
ENSMODG00000011619	TRMT1	94	68.034	ENSGAFG00000011862	trmt1	90	68.621	Gambusia_affinis
ENSMODG00000011619	TRMT1	96	62.901	ENSGACG00000000227	trmt1	95	63.238	Gasterosteus_aculeatus
ENSMODG00000011619	TRMT1	95	69.640	ENSGAGG00000016432	TRMT1	87	69.640	Gopherus_agassizii
ENSMODG00000011619	TRMT1	98	76.403	ENSGGOG00000014007	TRMT1	92	76.403	Gorilla_gorilla
ENSMODG00000011619	TRMT1	91	58.707	ENSHBUG00000008821	trmt1	93	58.707	Haplochromis_burtoni
ENSMODG00000011619	TRMT1	99	73.096	ENSHGLG00000015972	TRMT1	94	73.096	Heterocephalus_glaber_female
ENSMODG00000011619	TRMT1	99	67.961	ENSHGLG00100018112	TRMT1	94	67.961	Heterocephalus_glaber_male
ENSMODG00000011619	TRMT1	93	63.748	ENSHCOG00000009447	trmt1	88	63.748	Hippocampus_comes
ENSMODG00000011619	TRMT1	95	65.997	ENSIPUG00000002899	trmt1	86	65.829	Ictalurus_punctatus
ENSMODG00000011619	TRMT1	96	77.349	ENSSTOG00000012531	TRMT1	91	77.349	Ictidomys_tridecemlineatus
ENSMODG00000011619	TRMT1	95	75.294	ENSJJAG00000017154	Trmt1	91	74.958	Jaculus_jaculus
ENSMODG00000011619	TRMT1	97	66.107	ENSKMAG00000011809	trmt1	98	66.096	Kryptolebias_marmoratus
ENSMODG00000011619	TRMT1	95	65.136	ENSLBEG00000012703	trmt1	87	65.136	Labrus_bergylta
ENSMODG00000011619	TRMT1	93	60.771	ENSLACG00000014585	TRMT1	97	60.307	Latimeria_chalumnae
ENSMODG00000011619	TRMT1	93	61.565	ENSLOCG00000006479	trmt1	98	61.565	Lepisosteus_oculatus
ENSMODG00000011619	TRMT1	98	76.480	ENSLAFG00000014072	TRMT1	93	76.480	Loxodonta_africana
ENSMODG00000011619	TRMT1	99	75.527	ENSMFAG00000033143	TRMT1	93	75.527	Macaca_fascicularis
ENSMODG00000011619	TRMT1	99	70.636	ENSMMUG00000001167	TRMT1	94	70.636	Macaca_mulatta
ENSMODG00000011619	TRMT1	98	76.683	ENSMNEG00000037867	TRMT1	92	76.683	Macaca_nemestrina
ENSMODG00000011619	TRMT1	99	75.365	ENSMLEG00000016142	TRMT1	93	75.365	Mandrillus_leucophaeus
ENSMODG00000011619	TRMT1	97	65.557	ENSMAMG00000004357	trmt1	89	65.557	Mastacembelus_armatus
ENSMODG00000011619	TRMT1	98	61.851	ENSMZEG00005014510	trmt1	93	61.851	Maylandia_zebra
ENSMODG00000011619	TRMT1	97	75.874	ENSMAUG00000011134	Trmt1	90	75.874	Mesocricetus_auratus
ENSMODG00000011619	TRMT1	97	76.898	ENSMICG00000000793	TRMT1	91	76.898	Microcebus_murinus
ENSMODG00000011619	TRMT1	97	76.040	ENSMOCG00000015895	Trmt1	90	76.040	Microtus_ochrogaster
ENSMODG00000011619	TRMT1	95	65.136	ENSMMOG00000011097	trmt1	95	65.136	Mola_mola
ENSMODG00000011619	TRMT1	97	76.294	MGP_CAROLIEiJ_G0031304	Trmt1	98	69.531	Mus_caroli
ENSMODG00000011619	TRMT1	97	76.628	ENSMUSG00000001909	Trmt1	98	69.922	Mus_musculus
ENSMODG00000011619	TRMT1	97	76.461	MGP_SPRETEiJ_G0032422	Trmt1	98	69.531	Mus_spretus
ENSMODG00000011619	TRMT1	97	77.483	ENSMPUG00000004210	TRMT1	86	77.483	Mustela_putorius_furo
ENSMODG00000011619	TRMT1	100	75.645	ENSMLUG00000012809	TRMT1	92	75.645	Myotis_lucifugus
ENSMODG00000011619	TRMT1	97	75.698	ENSNGAG00000022486	Trmt1	92	75.698	Nannospalax_galili
ENSMODG00000011619	TRMT1	81	69.027	ENSNBRG00000024376	trmt1	86	69.027	Neolamprologus_brichardi
ENSMODG00000011619	TRMT1	77	75.000	ENSNLEG00000013019	-	90	75.000	Nomascus_leucogenys
ENSMODG00000011619	TRMT1	96	90.000	ENSMEUG00000013756	TRMT1	100	90.000	Notamacropus_eugenii
ENSMODG00000011619	TRMT1	79	79.661	ENSOPRG00000009471	-	74	79.661	Ochotona_princeps
ENSMODG00000011619	TRMT1	100	74.475	ENSODEG00000010323	TRMT1	93	74.475	Octodon_degus
ENSMODG00000011619	TRMT1	97	66.000	ENSONIG00000000400	trmt1	96	66.000	Oreochromis_niloticus
ENSMODG00000011619	TRMT1	82	79.020	ENSOCUG00000021934	TRMT1	95	79.020	Oryctolagus_cuniculus
ENSMODG00000011619	TRMT1	98	59.551	ENSORLG00000020074	trmt1	97	59.840	Oryzias_latipes
ENSMODG00000011619	TRMT1	98	63.533	ENSORLG00020007561	trmt1	96	63.107	Oryzias_latipes_hni
ENSMODG00000011619	TRMT1	98	63.533	ENSORLG00015006547	trmt1	93	63.533	Oryzias_latipes_hsok
ENSMODG00000011619	TRMT1	99	63.387	ENSOMEG00000019343	trmt1	93	63.387	Oryzias_melastigma
ENSMODG00000011619	TRMT1	99	73.127	ENSOGAG00000025576	TRMT1	96	73.290	Otolemur_garnettii
ENSMODG00000011619	TRMT1	100	60.737	ENSOARG00000009397	TRMT1	87	61.218	Ovis_aries
ENSMODG00000011619	TRMT1	98	61.501	ENSPPRG00000012117	TRMT1	93	68.954	Panthera_pardus
ENSMODG00000011619	TRMT1	76	74.468	ENSPTIG00000008833	TRMT1	90	74.468	Panthera_tigris_altaica
ENSMODG00000011619	TRMT1	98	76.568	ENSPTRG00000010557	TRMT1	92	76.568	Pan_troglodytes
ENSMODG00000011619	TRMT1	96	57.737	ENSPTRG00000050421	-	90	57.737	Pan_troglodytes
ENSMODG00000011619	TRMT1	98	76.683	ENSPANG00000009247	TRMT1	92	76.683	Papio_anubis
ENSMODG00000011619	TRMT1	77	64.421	ENSPANG00000034058	-	82	64.421	Papio_anubis
ENSMODG00000011619	TRMT1	94	69.056	ENSPKIG00000005309	trmt1	85	69.056	Paramormyrops_kingsleyae
ENSMODG00000011619	TRMT1	92	59.649	ENSPSIG00000008762	TRMT1	82	59.649	Pelodiscus_sinensis
ENSMODG00000011619	TRMT1	97	65.261	ENSPMGG00000019764	trmt1	95	65.261	Periophthalmus_magnuspinnatus
ENSMODG00000011619	TRMT1	99	74.799	ENSPEMG00000016247	Trmt1	93	74.799	Peromyscus_maniculatus_bairdii
ENSMODG00000011619	TRMT1	92	61.552	ENSPMAG00000004329	trmt1	90	61.552	Petromyzon_marinus
ENSMODG00000011619	TRMT1	100	91.817	ENSPCIG00000019273	TRMT1	96	91.817	Phascolarctos_cinereus
ENSMODG00000011619	TRMT1	94	69.828	ENSPFOG00000008527	trmt1	90	69.828	Poecilia_formosa
ENSMODG00000011619	TRMT1	96	68.297	ENSPLAG00000018788	trmt1	92	69.982	Poecilia_latipinna
ENSMODG00000011619	TRMT1	94	69.828	ENSPMEG00000013120	trmt1	90	69.828	Poecilia_mexicana
ENSMODG00000011619	TRMT1	93	68.815	ENSPREG00000000211	trmt1	86	69.420	Poecilia_reticulata
ENSMODG00000011619	TRMT1	98	76.403	ENSPPYG00000009622	TRMT1	92	76.403	Pongo_abelii
ENSMODG00000011619	TRMT1	98	69.572	ENSPCAG00000003698	TRMT1	93	69.572	Procavia_capensis
ENSMODG00000011619	TRMT1	99	74.637	ENSPCOG00000008653	TRMT1	94	74.637	Propithecus_coquereli
ENSMODG00000011619	TRMT1	97	77.723	ENSPVAG00000015076	TRMT1	92	77.723	Pteropus_vampyrus
ENSMODG00000011619	TRMT1	97	61.448	ENSPNYG00000013960	trmt1	96	61.448	Pundamilia_nyererei
ENSMODG00000011619	TRMT1	89	70.309	ENSPNAG00000024859	trmt1	90	70.309	Pygocentrus_nattereri
ENSMODG00000011619	TRMT1	98	76.073	ENSRNOG00000002914	Trmt1	95	76.073	Rattus_norvegicus
ENSMODG00000011619	TRMT1	95	59.253	ENSRBIG00000037505	-	91	59.253	Rhinopithecus_bieti
ENSMODG00000011619	TRMT1	98	76.190	ENSRBIG00000038324	TRMT1	92	76.190	Rhinopithecus_bieti
ENSMODG00000011619	TRMT1	95	58.744	ENSRROG00000031847	-	90	58.744	Rhinopithecus_roxellana
ENSMODG00000011619	TRMT1	98	76.026	ENSRROG00000028599	TRMT1	92	76.026	Rhinopithecus_roxellana
ENSMODG00000011619	TRMT1	82	36.704	YDR120C	-	92	36.704	Saccharomyces_cerevisiae
ENSMODG00000011619	TRMT1	99	71.683	ENSSBOG00000028861	TRMT1	95	74.281	Saimiri_boliviensis_boliviensis
ENSMODG00000011619	TRMT1	95	91.854	ENSSHAG00000014381	TRMT1	98	90.985	Sarcophilus_harrisii
ENSMODG00000011619	TRMT1	93	69.002	ENSSFOG00015004139	trmt1	84	69.002	Scleropages_formosus
ENSMODG00000011619	TRMT1	92	67.832	ENSSMAG00000021136	trmt1	85	67.832	Scophthalmus_maximus
ENSMODG00000011619	TRMT1	95	65.878	ENSSDUG00000012740	trmt1	92	64.058	Seriola_dumerili
ENSMODG00000011619	TRMT1	95	65.541	ENSSLDG00000005971	trmt1	92	63.738	Seriola_lalandi_dorsalis
ENSMODG00000011619	TRMT1	87	75.092	ENSSARG00000005138	TRMT1	96	75.092	Sorex_araneus
ENSMODG00000011619	TRMT1	89	57.741	ENSSPUG00000001084	TRMT1	92	58.106	Sphenodon_punctatus
ENSMODG00000011619	TRMT1	97	63.079	ENSSPAG00000007153	trmt1	97	64.007	Stegastes_partitus
ENSMODG00000011619	TRMT1	100	76.812	ENSSSCG00000013744	TRMT1	97	76.812	Sus_scrofa
ENSMODG00000011619	TRMT1	95	62.584	ENSTRUG00000010700	trmt1	89	62.919	Takifugu_rubripes
ENSMODG00000011619	TRMT1	92	68.262	ENSTNIG00000018808	trmt1	98	68.262	Tetraodon_nigroviridis
ENSMODG00000011619	TRMT1	100	73.676	ENSTTRG00000006379	TRMT1	94	73.676	Tursiops_truncatus
ENSMODG00000011619	TRMT1	99	76.052	ENSUAMG00000022911	TRMT1	96	74.716	Ursus_americanus
ENSMODG00000011619	TRMT1	99	75.566	ENSUMAG00000006027	TRMT1	96	75.566	Ursus_maritimus
ENSMODG00000011619	TRMT1	99	76.911	ENSVVUG00000024177	TRMT1	93	76.911	Vulpes_vulpes
ENSMODG00000011619	TRMT1	75	71.367	ENSXETG00000033863	TRMT1	92	71.367	Xenopus_tropicalis
ENSMODG00000011619	TRMT1	96	67.337	ENSXCOG00000015733	trmt1	92	67.905	Xiphophorus_couchianus
ENSMODG00000011619	TRMT1	93	68.403	ENSXMAG00000013823	trmt1	99	69.177	Xiphophorus_maculatus