EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000011925 (Gene tree)
Gene ID: 100020370
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 17009 bases
Position: chr1:330653918-330670926
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000014946	RRM_5	PF13893.6	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000015220	-	2740	-	ENSMODP00000014946	857 (aa)	-	F7DZC2

Gene Model

Click here to download ENSMODG00000011925's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000011925's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000011925	-	99	90.515	ENSG00000015479	MATR3	100	98.000	Homo_sapiens
ENSMODG00000011925	-	99	85.667	ENSAMEG00000011347	-	100	85.778	Ailuropoda_melanoleuca
ENSMODG00000011925	-	99	78.751	ENSAPLG00000008118	-	100	78.070	Anas_platyrhynchos
ENSMODG00000011925	-	99	72.067	ENSACAG00000016233	-	99	71.875	Anolis_carolinensis
ENSMODG00000011925	-	75	68.266	ENSANAG00000024654	-	99	68.266	Aotus_nancymaae
ENSMODG00000011925	-	99	90.164	ENSANAG00000022951	-	100	90.749	Aotus_nancymaae
ENSMODG00000011925	-	73	58.929	ENSAMXG00000010681	matr3l1.1	72	58.929	Astyanax_mexicanus
ENSMODG00000011925	-	84	30.839	ENSAMXG00000010685	matr3l1.1	86	31.330	Astyanax_mexicanus
ENSMODG00000011925	-	93	84.988	ENSBTAG00000006756	MATR3	99	85.106	Bos_taurus
ENSMODG00000011925	-	99	85.317	ENSCJAG00000006888	-	99	87.573	Callithrix_jacchus
ENSMODG00000011925	-	99	90.398	ENSCAFG00000001345	MATR3	100	90.984	Canis_familiaris
ENSMODG00000011925	-	99	87.067	ENSCAFG00020010504	-	96	93.741	Canis_lupus_dingo
ENSMODG00000011925	-	99	90.749	ENSCHIG00000025746	-	100	91.335	Capra_hircus
ENSMODG00000011925	-	99	89.227	ENSTSYG00000011028	-	100	90.984	Carlito_syrichta
ENSMODG00000011925	-	99	89.227	ENSCPOG00000014076	-	100	90.984	Cavia_porcellus
ENSMODG00000011925	-	99	89.110	ENSCCAG00000025074	-	100	90.867	Cebus_capucinus
ENSMODG00000011925	-	65	84.946	ENSCATG00000041304	-	99	86.738	Cercocebus_atys
ENSMODG00000011925	-	99	89.461	ENSCLAG00000015998	-	100	91.218	Chinchilla_lanigera
ENSMODG00000011925	-	99	89.461	ENSCSAG00000013075	-	100	91.218	Chlorocebus_sabaeus
ENSMODG00000011925	-	99	78.642	ENSCPBG00000006303	-	100	79.057	Chrysemys_picta_bellii
ENSMODG00000011925	-	99	88.056	ENSCANG00000028224	-	100	89.813	Colobus_angolensis_palliatus
ENSMODG00000011925	-	99	90.749	ENSCGRG00001020227	Matr3	100	91.335	Cricetulus_griseus_chok1gshd
ENSMODG00000011925	-	99	90.632	ENSCGRG00000011298	Matr3	100	91.218	Cricetulus_griseus_crigri
ENSMODG00000011925	-	83	42.453	ENSCSEG00000012682	matr3l1.1	58	42.453	Cynoglossus_semilaevis
ENSMODG00000011925	-	74	53.704	ENSCVAG00000005337	matr3l1.1	79	32.071	Cyprinodon_variegatus
ENSMODG00000011925	-	99	85.493	ENSDNOG00000037723	-	100	85.588	Dasypus_novemcinctus
ENSMODG00000011925	-	99	90.749	ENSEASG00005020857	-	100	91.335	Equus_asinus_asinus
ENSMODG00000011925	-	99	90.749	ENSECAG00000012882	MATR3	100	91.335	Equus_caballus
ENSMODG00000011925	-	86	30.739	ENSELUG00000021848	matr3l1.1	76	52.459	Esox_lucius
ENSMODG00000011925	-	71	52.941	ENSELUG00000021651	si:ch211-271b14.1	86	52.941	Esox_lucius
ENSMODG00000011925	-	99	90.632	ENSFCAG00000021911	-	100	91.218	Felis_catus
ENSMODG00000011925	-	99	77.851	ENSFALG00000003071	-	100	78.798	Ficedula_albicollis
ENSMODG00000011925	-	99	89.578	ENSFDAG00000017675	-	100	89.930	Fukomys_damarensis
ENSMODG00000011925	-	99	78.751	ENSGALG00000002478	MATR3	100	78.070	Gallus_gallus
ENSMODG00000011925	-	99	78.642	ENSGAGG00000011386	-	100	79.057	Gopherus_agassizii
ENSMODG00000011925	-	99	90.632	ENSGGOG00000007308	-	100	91.218	Gorilla_gorilla
ENSMODG00000011925	-	99	90.749	ENSHGLG00000004673	MATR3	100	91.335	Heterocephalus_glaber_female
ENSMODG00000011925	-	60	88.178	ENSHGLG00100006442	-	100	88.178	Heterocephalus_glaber_male
ENSMODG00000011925	-	99	90.632	ENSSTOG00000014746	-	100	91.218	Ictidomys_tridecemlineatus
ENSMODG00000011925	-	60	63.178	ENSJJAG00000011022	-	100	62.597	Jaculus_jaculus
ENSMODG00000011925	-	99	89.918	ENSJJAG00000021710	-	100	90.504	Jaculus_jaculus
ENSMODG00000011925	-	99	56.243	ENSLACG00000006743	-	99	57.780	Latimeria_chalumnae
ENSMODG00000011925	-	99	85.539	ENSMFAG00000000634	-	100	85.984	Macaca_fascicularis
ENSMODG00000011925	-	99	85.539	ENSMMUG00000016741	MATR3	99	90.989	Macaca_mulatta
ENSMODG00000011925	-	59	92.475	ENSMMUG00000015963	-	99	92.475	Macaca_mulatta
ENSMODG00000011925	-	99	89.578	ENSMNEG00000042856	-	100	91.335	Macaca_nemestrina
ENSMODG00000011925	-	99	89.578	ENSMLEG00000041178	-	100	91.335	Mandrillus_leucophaeus
ENSMODG00000011925	-	71	55.556	ENSMAMG00000013840	matr3l1.1	76	41.121	Mastacembelus_armatus
ENSMODG00000011925	-	99	78.751	ENSMGAG00000001331	-	100	78.070	Meleagris_gallopavo
ENSMODG00000011925	-	99	90.515	ENSMAUG00000011647	Matr3	100	91.101	Mesocricetus_auratus
ENSMODG00000011925	-	62	87.222	ENSMICG00000012438	-	98	87.500	Microcebus_murinus
ENSMODG00000011925	-	99	90.515	ENSMOCG00000015711	Matr3	100	91.101	Microtus_ochrogaster
ENSMODG00000011925	-	99	90.164	MGP_CAROLIEiJ_G0022108	Matr3	100	90.749	Mus_caroli
ENSMODG00000011925	-	99	90.164	ENSMUSG00000037236	Matr3	100	90.749	Mus_musculus
ENSMODG00000011925	-	99	90.164	MGP_PahariEiJ_G0018842	Matr3	100	90.749	Mus_pahari
ENSMODG00000011925	-	99	89.813	MGP_SPRETEiJ_G0023020	Matr3	100	90.398	Mus_spretus
ENSMODG00000011925	-	99	88.364	ENSMPUG00000009297	-	100	89.401	Mustela_putorius_furo
ENSMODG00000011925	-	99	89.431	ENSMLUG00000005798	-	99	90.012	Myotis_lucifugus
ENSMODG00000011925	-	99	89.110	ENSNGAG00000017452	Matr3	100	90.632	Nannospalax_galili
ENSMODG00000011925	-	99	89.578	ENSNLEG00000009093	-	100	91.335	Nomascus_leucogenys
ENSMODG00000011925	-	98	83.951	ENSOPRG00000016511	-	100	83.671	Ochotona_princeps
ENSMODG00000011925	-	99	89.461	ENSODEG00000003015	-	100	91.218	Octodon_degus
ENSMODG00000011925	-	99	90.398	ENSOCUG00000026311	MATR3	100	90.984	Oryctolagus_cuniculus
ENSMODG00000011925	-	63	45.122	ENSORLG00020009362	matr3l1.1	80	32.188	Oryzias_latipes_hni
ENSMODG00000011925	-	61	59.259	ENSORLG00015018551	matr3l1.1	75	45.349	Oryzias_latipes_hsok
ENSMODG00000011925	-	66	34.921	ENSOMEG00000022287	matr3l1.1	69	32.550	Oryzias_melastigma
ENSMODG00000011925	-	99	89.461	ENSOGAG00000010607	-	100	91.218	Otolemur_garnettii
ENSMODG00000011925	-	100	90.814	ENSOARG00000016931	-	100	91.395	Ovis_aries
ENSMODG00000011925	-	65	84.022	ENSPPAG00000026720	-	99	84.201	Pan_paniscus
ENSMODG00000011925	-	99	85.762	ENSPPAG00000001418	-	99	87.097	Pan_paniscus
ENSMODG00000011925	-	99	90.749	ENSPPRG00000008004	-	100	91.335	Panthera_pardus
ENSMODG00000011925	-	95	91.187	ENSPTIG00000010711	-	100	91.187	Panthera_tigris_altaica
ENSMODG00000011925	-	99	85.762	ENSPTRG00000017294	MATR3	99	87.097	Pan_troglodytes
ENSMODG00000011925	-	99	88.173	ENSPANG00000012018	-	100	89.930	Papio_anubis
ENSMODG00000011925	-	65	85.946	ENSPANG00000032489	-	99	87.748	Papio_anubis
ENSMODG00000011925	-	96	33.187	ENSPKIG00000000333	matr3l1.1	56	66.071	Paramormyrops_kingsleyae
ENSMODG00000011925	-	99	79.628	ENSPSIG00000014598	-	100	79.167	Pelodiscus_sinensis
ENSMODG00000011925	-	99	90.398	ENSPEMG00000020679	Matr3	100	90.984	Peromyscus_maniculatus_bairdii
ENSMODG00000011925	-	99	85.539	ENSPPYG00000015835	-	100	85.984	Pongo_abelii
ENSMODG00000011925	-	99	90.281	ENSPCOG00000025718	-	100	90.867	Propithecus_coquereli
ENSMODG00000011925	-	97	85.391	ENSPVAG00000015431	-	100	85.844	Pteropus_vampyrus
ENSMODG00000011925	-	99	89.930	ENSRNOG00000019875	Matr3	100	90.515	Rattus_norvegicus
ENSMODG00000011925	-	65	85.125	ENSRBIG00000034713	-	99	86.918	Rhinopithecus_bieti
ENSMODG00000011925	-	99	87.237	ENSRROG00000039415	-	100	88.993	Rhinopithecus_roxellana
ENSMODG00000011925	-	99	87.705	ENSRROG00000043949	-	100	89.461	Rhinopithecus_roxellana
ENSMODG00000011925	-	99	89.227	ENSSBOG00000030159	-	100	90.984	Saimiri_boliviensis_boliviensis
ENSMODG00000011925	-	100	99.300	ENSSHAG00000010331	-	100	99.300	Sarcophilus_harrisii
ENSMODG00000011925	-	61	55.556	ENSSDUG00000015369	matr3l1.1	79	31.712	Seriola_dumerili
ENSMODG00000011925	-	99	76.123	ENSSPUG00000019236	-	100	76.123	Sphenodon_punctatus
ENSMODG00000011925	-	99	90.749	ENSSSCG00000014343	-	100	91.335	Sus_scrofa
ENSMODG00000011925	-	99	78.009	ENSTGUG00000014568	MATR3	99	78.728	Taeniopygia_guttata
ENSMODG00000011925	-	60	57.143	ENSTNIG00000003166	matr3l1.1	72	57.143	Tetraodon_nigroviridis
ENSMODG00000011925	-	82	93.172	ENSUAMG00000000097	-	95	93.883	Ursus_americanus
ENSMODG00000011925	-	99	90.973	ENSUMAG00000015808	-	100	90.973	Ursus_maritimus
ENSMODG00000011925	-	99	85.493	ENSVPAG00000006337	-	100	84.828	Vicugna_pacos
ENSMODG00000011925	-	99	90.632	ENSVVUG00000020287	-	100	91.218	Vulpes_vulpes
ENSMODG00000011925	-	99	53.552	ENSXETG00000003838	matr3	100	53.282	Xenopus_tropicalis
ENSMODG00000011925	-	67	36.082	ENSXMAG00000014107	-	89	30.350	Xiphophorus_maculatus