EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000012108 (Gene tree)
Gene ID: 100015670
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 18880 bases
Position: chr1:457153967-457172846
Accession: 100015670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000015165	zf-C2H2	PF00096.26	1e-11	1	2
ENSMODP00000015165	zf-C2H2	PF00096.26	1e-11	2	2
ENSMODP00000015165	zf-met	PF12874.7	4.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000015447	PRDM12-201	3046	-	ENSMODP00000015165	355 (aa)	XP_001369688	F7FUD7

Gene Model

Click here to download ENSMODG00000012108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000012108's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000012108	PRDM12	94	94.910	ENSG00000130711	PRDM12	100	90.191	Homo_sapiens
ENSMODG00000012108	PRDM12	99	66.033	ENSAPOG00000018234	-	100	66.667	Acanthochromis_polyacanthus
ENSMODG00000012108	PRDM12	99	75.844	ENSAPOG00000016051	prdm12b	100	76.302	Acanthochromis_polyacanthus
ENSMODG00000012108	PRDM12	91	91.950	ENSAMEG00000016234	PRDM12	99	92.260	Ailuropoda_melanoleuca
ENSMODG00000012108	PRDM12	99	77.454	ENSACIG00000019578	prdm12b	100	77.719	Amphilophus_citrinellus
ENSMODG00000012108	PRDM12	99	77.105	ENSACIG00000005193	-	100	77.368	Amphilophus_citrinellus
ENSMODG00000012108	PRDM12	99	77.428	ENSAOCG00000015040	prdm12b	100	77.895	Amphiprion_ocellaris
ENSMODG00000012108	PRDM12	99	78.042	ENSAPEG00000015092	prdm12b	100	78.515	Amphiprion_percula
ENSMODG00000012108	PRDM12	100	72.917	ENSAPEG00000022849	-	100	74.479	Amphiprion_percula
ENSMODG00000012108	PRDM12	95	81.579	ENSATEG00000014595	-	99	81.579	Anabas_testudineus
ENSMODG00000012108	PRDM12	96	95.000	ENSANAG00000020616	PRDM12	100	95.000	Aotus_nancymaae
ENSMODG00000012108	PRDM12	99	74.177	ENSACLG00000007631	-	100	75.696	Astatotilapia_calliptera
ENSMODG00000012108	PRDM12	99	80.165	ENSACLG00000011876	prdm12b	100	80.165	Astatotilapia_calliptera
ENSMODG00000012108	PRDM12	99	80.939	ENSAMXG00000008540	PRDM12	100	80.939	Astyanax_mexicanus
ENSMODG00000012108	PRDM12	99	83.558	ENSAMXG00000033665	prdm12b	100	85.445	Astyanax_mexicanus
ENSMODG00000012108	PRDM12	94	95.509	ENSBTAG00000023797	PRDM12	100	92.244	Bos_taurus
ENSMODG00000012108	PRDM12	94	95.210	ENSCJAG00000020540	PRDM12	100	92.222	Callithrix_jacchus
ENSMODG00000012108	PRDM12	82	95.189	ENSCAFG00000023076	PRDM12	99	90.654	Canis_familiaris
ENSMODG00000012108	PRDM12	94	95.808	ENSCAFG00020024046	PRDM12	100	91.758	Canis_lupus_dingo
ENSMODG00000012108	PRDM12	94	95.808	ENSCHIG00000025005	PRDM12	100	92.265	Capra_hircus
ENSMODG00000012108	PRDM12	88	95.208	ENSCPOG00000005901	PRDM12	95	95.208	Cavia_porcellus
ENSMODG00000012108	PRDM12	94	95.210	ENSCCAG00000037485	PRDM12	100	91.460	Cebus_capucinus
ENSMODG00000012108	PRDM12	94	95.210	ENSCATG00000020327	PRDM12	100	91.460	Cercocebus_atys
ENSMODG00000012108	PRDM12	94	95.210	ENSCLAG00000005499	PRDM12	92	95.210	Chinchilla_lanigera
ENSMODG00000012108	PRDM12	94	95.210	ENSCSAG00000014756	PRDM12	100	91.209	Chlorocebus_sabaeus
ENSMODG00000012108	PRDM12	100	96.056	ENSCPBG00000022628	PRDM12	100	96.056	Chrysemys_picta_bellii
ENSMODG00000012108	PRDM12	94	95.210	ENSCGRG00001015005	Prdm12	100	90.710	Cricetulus_griseus_chok1gshd
ENSMODG00000012108	PRDM12	99	78.495	ENSCVAG00000017166	prdm12b	100	78.706	Cyprinodon_variegatus
ENSMODG00000012108	PRDM12	99	73.846	ENSCVAG00000000944	-	100	74.615	Cyprinodon_variegatus
ENSMODG00000012108	PRDM12	99	85.831	ENSDARG00000007430	prdm12b	100	85.831	Danio_rerio
ENSMODG00000012108	PRDM12	94	94.910	ENSDNOG00000042302	PRDM12	99	91.967	Dasypus_novemcinctus
ENSMODG00000012108	PRDM12	87	64.307	ENSEBUG00000016780	prdm12b	75	65.782	Eptatretus_burgeri
ENSMODG00000012108	PRDM12	96	95.294	ENSEASG00005008472	PRDM12	100	91.989	Equus_asinus_asinus
ENSMODG00000012108	PRDM12	96	95.000	ENSECAG00000005933	PRDM12	100	91.713	Equus_caballus
ENSMODG00000012108	PRDM12	99	79.167	ENSELUG00000013674	PRDM12	99	79.167	Esox_lucius
ENSMODG00000012108	PRDM12	99	83.065	ENSELUG00000009905	prdm12b	100	83.065	Esox_lucius
ENSMODG00000012108	PRDM12	94	95.808	ENSFCAG00000043086	PRDM12	100	92.011	Felis_catus
ENSMODG00000012108	PRDM12	100	96.338	ENSFALG00000001445	PRDM12	89	96.338	Ficedula_albicollis
ENSMODG00000012108	PRDM12	99	76.804	ENSFHEG00000007746	-	100	76.804	Fundulus_heteroclitus
ENSMODG00000012108	PRDM12	99	77.867	ENSFHEG00000003944	prdm12b	100	78.877	Fundulus_heteroclitus
ENSMODG00000012108	PRDM12	99	81.127	ENSGMOG00000011797	prdm12b	99	81.408	Gadus_morhua
ENSMODG00000012108	PRDM12	100	96.338	ENSGALG00000003895	PRDM12	100	96.338	Gallus_gallus
ENSMODG00000012108	PRDM12	100	77.660	ENSGAFG00000010827	prdm12b	100	79.467	Gambusia_affinis
ENSMODG00000012108	PRDM12	100	79.570	ENSGACG00000016713	prdm12b	100	79.570	Gasterosteus_aculeatus
ENSMODG00000012108	PRDM12	100	96.338	ENSGAGG00000014083	PRDM12	100	96.338	Gopherus_agassizii
ENSMODG00000012108	PRDM12	94	94.611	ENSGGOG00000010568	PRDM12	100	90.164	Gorilla_gorilla
ENSMODG00000012108	PRDM12	99	78.933	ENSHBUG00000022878	prdm12b	100	78.933	Haplochromis_burtoni
ENSMODG00000012108	PRDM12	99	74.177	ENSHBUG00000022537	-	93	75.696	Haplochromis_burtoni
ENSMODG00000012108	PRDM12	94	94.012	ENSHGLG00000013939	PRDM12	100	89.589	Heterocephalus_glaber_female
ENSMODG00000012108	PRDM12	91	80.117	ENSHCOG00000003663	prdm12b	100	73.537	Hippocampus_comes
ENSMODG00000012108	PRDM12	99	74.380	ENSHCOG00000021167	-	100	74.380	Hippocampus_comes
ENSMODG00000012108	PRDM12	99	84.282	ENSIPUG00000017053	prdm12b	100	84.553	Ictalurus_punctatus
ENSMODG00000012108	PRDM12	99	77.198	ENSIPUG00000019544	PRDM12	100	77.198	Ictalurus_punctatus
ENSMODG00000012108	PRDM12	95	95.562	ENSSTOG00000005986	PRDM12	88	95.562	Ictidomys_tridecemlineatus
ENSMODG00000012108	PRDM12	93	95.455	ENSJJAG00000005424	Prdm12	100	95.455	Jaculus_jaculus
ENSMODG00000012108	PRDM12	99	72.593	ENSKMAG00000016921	prdm12b	100	73.086	Kryptolebias_marmoratus
ENSMODG00000012108	PRDM12	99	79.330	ENSKMAG00000021205	-	99	79.330	Kryptolebias_marmoratus
ENSMODG00000012108	PRDM12	99	78.042	ENSLBEG00000017769	prdm12b	100	78.042	Labrus_bergylta
ENSMODG00000012108	PRDM12	99	77.165	ENSLBEG00000007776	-	100	77.428	Labrus_bergylta
ENSMODG00000012108	PRDM12	99	92.373	ENSLACG00000017560	PRDM12	99	92.373	Latimeria_chalumnae
ENSMODG00000012108	PRDM12	99	86.501	ENSLOCG00000005429	prdm12b	99	87.912	Lepisosteus_oculatus
ENSMODG00000012108	PRDM12	94	94.118	ENSLAFG00000006979	PRDM12	93	93.948	Loxodonta_africana
ENSMODG00000012108	PRDM12	100	88.828	ENSMFAG00000040322	PRDM12	100	90.463	Macaca_fascicularis
ENSMODG00000012108	PRDM12	94	95.210	ENSMNEG00000037234	PRDM12	100	91.460	Macaca_nemestrina
ENSMODG00000012108	PRDM12	99	74.550	ENSMAMG00000018988	-	100	75.835	Mastacembelus_armatus
ENSMODG00000012108	PRDM12	99	78.457	ENSMAMG00000013212	prdm12b	100	78.400	Mastacembelus_armatus
ENSMODG00000012108	PRDM12	99	73.804	ENSMZEG00005000415	PRDM12	100	75.315	Maylandia_zebra
ENSMODG00000012108	PRDM12	98	95.989	ENSMGAG00000005438	PRDM12	99	95.989	Meleagris_gallopavo
ENSMODG00000012108	PRDM12	100	90.959	ENSMAUG00000013040	Prdm12	100	90.959	Mesocricetus_auratus
ENSMODG00000012108	PRDM12	96	95.308	ENSMICG00000015480	PRDM12	100	91.989	Microcebus_murinus
ENSMODG00000012108	PRDM12	98	93.660	ENSMOCG00000021026	Prdm12	93	94.721	Microtus_ochrogaster
ENSMODG00000012108	PRDM12	99	67.925	ENSMALG00000021901	prdm12b	99	67.925	Monopterus_albus
ENSMODG00000012108	PRDM12	94	94.910	MGP_CAROLIEiJ_G0023414	Prdm12	100	90.685	Mus_caroli
ENSMODG00000012108	PRDM12	94	94.910	ENSMUSG00000079466	Prdm12	100	90.685	Mus_musculus
ENSMODG00000012108	PRDM12	94	94.910	MGP_PahariEiJ_G0024871	Prdm12	100	90.685	Mus_pahari
ENSMODG00000012108	PRDM12	94	94.910	MGP_SPRETEiJ_G0024331	Prdm12	100	90.685	Mus_spretus
ENSMODG00000012108	PRDM12	92	95.107	ENSNGAG00000018480	Prdm12	100	90.986	Nannospalax_galili
ENSMODG00000012108	PRDM12	99	78.042	ENSNBRG00000006727	prdm12b	100	78.307	Neolamprologus_brichardi
ENSMODG00000012108	PRDM12	99	75.068	ENSNBRG00000024312	-	100	76.164	Neolamprologus_brichardi
ENSMODG00000012108	PRDM12	100	89.014	ENSMEUG00000003828	PRDM12	100	89.014	Notamacropus_eugenii
ENSMODG00000012108	PRDM12	93	94.545	ENSOPRG00000008680	PRDM12	100	94.545	Ochotona_princeps
ENSMODG00000012108	PRDM12	96	94.721	ENSODEG00000016282	PRDM12	64	94.721	Octodon_degus
ENSMODG00000012108	PRDM12	61	97.706	ENSOANG00000001043	PRDM12	100	97.706	Ornithorhynchus_anatinus
ENSMODG00000012108	PRDM12	88	90.415	ENSOCUG00000008241	PRDM12	100	90.415	Oryctolagus_cuniculus
ENSMODG00000012108	PRDM12	100	77.045	ENSORLG00000007114	prdm12b	100	77.045	Oryzias_latipes
ENSMODG00000012108	PRDM12	99	73.657	ENSORLG00000017558	-	100	74.936	Oryzias_latipes
ENSMODG00000012108	PRDM12	92	81.579	ENSORLG00020019565	prdm12b	100	76.378	Oryzias_latipes_hni
ENSMODG00000012108	PRDM12	99	73.214	ENSORLG00020013167	-	100	74.745	Oryzias_latipes_hni
ENSMODG00000012108	PRDM12	99	73.657	ENSORLG00015003435	-	100	74.936	Oryzias_latipes_hsok
ENSMODG00000012108	PRDM12	100	76.517	ENSORLG00015007621	prdm12b	100	76.517	Oryzias_latipes_hsok
ENSMODG00000012108	PRDM12	100	75.781	ENSOMEG00000004134	prdm12b	100	75.718	Oryzias_melastigma
ENSMODG00000012108	PRDM12	99	77.513	ENSOMEG00000007762	-	100	77.513	Oryzias_melastigma
ENSMODG00000012108	PRDM12	94	95.796	ENSOGAG00000007557	PRDM12	100	95.796	Otolemur_garnettii
ENSMODG00000012108	PRDM12	83	92.833	ENSPPAG00000031506	-	99	92.833	Pan_paniscus
ENSMODG00000012108	PRDM12	100	84.680	ENSPPRG00000023024	PRDM12	92	84.680	Panthera_pardus
ENSMODG00000012108	PRDM12	94	94.910	ENSPTRG00000043324	-	100	90.437	Pan_troglodytes
ENSMODG00000012108	PRDM12	94	94.910	ENSPTRG00000021475	PRDM12	100	90.437	Pan_troglodytes
ENSMODG00000012108	PRDM12	94	95.210	ENSPANG00000025967	PRDM12	100	91.460	Papio_anubis
ENSMODG00000012108	PRDM12	97	77.401	ENSPKIG00000004305	PRDM12	99	77.778	Paramormyrops_kingsleyae
ENSMODG00000012108	PRDM12	99	84.182	ENSPKIG00000007228	prdm12b	100	84.450	Paramormyrops_kingsleyae
ENSMODG00000012108	PRDM12	100	94.648	ENSPSIG00000006739	PRDM12	100	94.648	Pelodiscus_sinensis
ENSMODG00000012108	PRDM12	100	76.781	ENSPMGG00000008867	prdm12b	100	78.820	Periophthalmus_magnuspinnatus
ENSMODG00000012108	PRDM12	99	73.890	ENSPMGG00000002356	-	100	74.740	Periophthalmus_magnuspinnatus
ENSMODG00000012108	PRDM12	94	95.181	ENSPEMG00000009969	Prdm12	96	90.909	Peromyscus_maniculatus_bairdii
ENSMODG00000012108	PRDM12	100	99.718	ENSPCIG00000024119	PRDM12	100	99.718	Phascolarctos_cinereus
ENSMODG00000012108	PRDM12	99	79.245	ENSPFOG00000019841	prdm12b	100	79.245	Poecilia_formosa
ENSMODG00000012108	PRDM12	92	84.940	ENSPLAG00000016626	prdm12b	100	78.571	Poecilia_latipinna
ENSMODG00000012108	PRDM12	97	76.694	ENSPMEG00000016698	prdm12b	100	77.989	Poecilia_mexicana
ENSMODG00000012108	PRDM12	94	77.101	ENSPREG00000003211	-	94	77.101	Poecilia_reticulata
ENSMODG00000012108	PRDM12	92	84.776	ENSPREG00000015073	prdm12b	100	78.272	Poecilia_reticulata
ENSMODG00000012108	PRDM12	97	93.605	ENSPPYG00000019694	PRDM12	98	93.605	Pongo_abelii
ENSMODG00000012108	PRDM12	94	95.808	ENSPCOG00000022255	PRDM12	100	91.530	Propithecus_coquereli
ENSMODG00000012108	PRDM12	94	95.509	ENSPVAG00000001511	PRDM12	100	91.257	Pteropus_vampyrus
ENSMODG00000012108	PRDM12	99	78.249	ENSPNYG00000009607	prdm12b	100	78.249	Pundamilia_nyererei
ENSMODG00000012108	PRDM12	99	73.804	ENSPNYG00000013589	-	100	75.315	Pundamilia_nyererei
ENSMODG00000012108	PRDM12	99	84.553	ENSPNAG00000024532	prdm12b	100	86.179	Pygocentrus_nattereri
ENSMODG00000012108	PRDM12	99	75.266	ENSPNAG00000013396	PRDM12	100	77.089	Pygocentrus_nattereri
ENSMODG00000012108	PRDM12	94	94.910	ENSRNOG00000009218	Prdm12	100	90.685	Rattus_norvegicus
ENSMODG00000012108	PRDM12	89	95.584	ENSRBIG00000042712	PRDM12	98	87.989	Rhinopithecus_bieti
ENSMODG00000012108	PRDM12	90	95.639	ENSRROG00000043554	PRDM12	100	95.639	Rhinopithecus_roxellana
ENSMODG00000012108	PRDM12	100	98.876	ENSSHAG00000015972	PRDM12	100	98.876	Sarcophilus_harrisii
ENSMODG00000012108	PRDM12	99	75.448	ENSSMAG00000003754	prdm12b	100	75.448	Scophthalmus_maximus
ENSMODG00000012108	PRDM12	95	81.633	ENSSDUG00000019071	-	100	77.344	Seriola_dumerili
ENSMODG00000012108	PRDM12	99	77.865	ENSSDUG00000023498	prdm12b	100	77.865	Seriola_dumerili
ENSMODG00000012108	PRDM12	99	77.953	ENSSLDG00000009557	prdm12b	100	77.953	Seriola_lalandi_dorsalis
ENSMODG00000012108	PRDM12	99	82.353	ENSSLDG00000013562	-	100	82.353	Seriola_lalandi_dorsalis
ENSMODG00000012108	PRDM12	100	96.056	ENSSPUG00000013424	PRDM12	100	96.056	Sphenodon_punctatus
ENSMODG00000012108	PRDM12	99	77.225	ENSSPAG00000018824	prdm12b	100	77.953	Stegastes_partitus
ENSMODG00000012108	PRDM12	99	67.442	ENSSPAG00000022420	-	100	70.509	Stegastes_partitus
ENSMODG00000012108	PRDM12	94	95.808	ENSSSCG00000005703	PRDM12	100	91.758	Sus_scrofa
ENSMODG00000012108	PRDM12	99	78.453	ENSTRUG00000013239	-	100	78.453	Takifugu_rubripes
ENSMODG00000012108	PRDM12	99	79.730	ENSTRUG00000018659	prdm12b	100	79.730	Takifugu_rubripes
ENSMODG00000012108	PRDM12	99	78.976	ENSTNIG00000009020	prdm12b	99	78.919	Tetraodon_nigroviridis
ENSMODG00000012108	PRDM12	99	76.880	ENSTNIG00000005859	-	99	76.880	Tetraodon_nigroviridis
ENSMODG00000012108	PRDM12	94	95.808	ENSUAMG00000009653	PRDM12	94	95.015	Ursus_americanus
ENSMODG00000012108	PRDM12	94	95.783	ENSVVUG00000027662	PRDM12	79	95.783	Vulpes_vulpes
ENSMODG00000012108	PRDM12	100	78.075	ENSXCOG00000002836	prdm12b	100	79.357	Xiphophorus_couchianus
ENSMODG00000012108	PRDM12	99	74.805	ENSXMAG00000028012	-	100	75.584	Xiphophorus_maculatus
ENSMODG00000012108	PRDM12	99	77.660	ENSXMAG00000005537	prdm12b	100	78.933	Xiphophorus_maculatus