EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000012226 (Gene tree)
Gene ID: 100011596
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 63354 bases
Position: chr1:427586880-427650233
Accession: 100011596
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000015315	DUF1604	PF07713.13	6.8e-37	1	1
ENSMODP00000015315	G-patch	PF01585.23	4.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000015600	GPATCH1-201	7347	-	ENSMODP00000015315	941 (aa)	XP_001362504	F6Z6Q3

Gene Model

Click here to download ENSMODG00000012226's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000012226's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000012226	GPATCH1	100	70.476	ENSG00000076650	GPATCH1	100	70.476	Homo_sapiens
ENSMODG00000012226	GPATCH1	90	74.765	ENSAMEG00000015575	GPATCH1	91	74.765	Ailuropoda_melanoleuca
ENSMODG00000012226	GPATCH1	80	70.718	ENSAOCG00000006668	gpatch1	75	70.718	Amphiprion_ocellaris
ENSMODG00000012226	GPATCH1	81	53.419	ENSAPEG00000000026	gpatch1	90	51.329	Amphiprion_percula
ENSMODG00000012226	GPATCH1	89	49.717	ENSATEG00000014494	gpatch1	90	51.831	Anabas_testudineus
ENSMODG00000012226	GPATCH1	90	58.545	ENSAPLG00000007584	GPATCH1	98	58.983	Anas_platyrhynchos
ENSMODG00000012226	GPATCH1	100	69.524	ENSANAG00000027002	GPATCH1	100	69.524	Aotus_nancymaae
ENSMODG00000012226	GPATCH1	81	53.418	ENSACLG00000024740	gpatch1	79	53.350	Astatotilapia_calliptera
ENSMODG00000012226	GPATCH1	90	51.354	ENSAMXG00000020177	gpatch1	98	52.221	Astyanax_mexicanus
ENSMODG00000012226	GPATCH1	90	74.941	ENSBTAG00000000721	GPATCH1	91	74.941	Bos_taurus
ENSMODG00000012226	GPATCH1	69	30.689	WBGene00011109	R07E5.1	68	30.840	Caenorhabditis_elegans
ENSMODG00000012226	GPATCH1	100	69.524	ENSCJAG00000000684	GPATCH1	100	69.524	Callithrix_jacchus
ENSMODG00000012226	GPATCH1	90	75.587	ENSCAFG00000007457	GPATCH1	77	75.587	Canis_familiaris
ENSMODG00000012226	GPATCH1	90	75.587	ENSCAFG00020019731	GPATCH1	91	75.587	Canis_lupus_dingo
ENSMODG00000012226	GPATCH1	90	75.176	ENSCHIG00000019626	GPATCH1	92	74.496	Capra_hircus
ENSMODG00000012226	GPATCH1	97	67.896	ENSCAPG00000008827	GPATCH1	91	68.231	Cavia_aperea
ENSMODG00000012226	GPATCH1	100	69.706	ENSCPOG00000024477	GPATCH1	91	70.452	Cavia_porcellus
ENSMODG00000012226	GPATCH1	100	69.068	ENSCCAG00000024676	GPATCH1	91	73.770	Cebus_capucinus
ENSMODG00000012226	GPATCH1	100	70.127	ENSCATG00000043637	GPATCH1	100	70.127	Cercocebus_atys
ENSMODG00000012226	GPATCH1	96	69.868	ENSCLAG00000003395	-	92	70.545	Chinchilla_lanigera
ENSMODG00000012226	GPATCH1	100	67.970	ENSCSAG00000004743	GPATCH1	100	67.970	Chlorocebus_sabaeus
ENSMODG00000012226	GPATCH1	82	67.270	ENSCHOG00000012865	GPATCH1	89	67.270	Choloepus_hoffmanni
ENSMODG00000012226	GPATCH1	78	67.715	ENSCPBG00000000666	GPATCH1	92	68.126	Chrysemys_picta_bellii
ENSMODG00000012226	GPATCH1	80	34.070	ENSCING00000012518	-	98	32.597	Ciona_intestinalis
ENSMODG00000012226	GPATCH1	93	72.138	ENSCANG00000012540	GPATCH1	100	74.429	Colobus_angolensis_palliatus
ENSMODG00000012226	GPATCH1	97	68.216	ENSCGRG00001016736	Gpatch1	91	69.904	Cricetulus_griseus_chok1gshd
ENSMODG00000012226	GPATCH1	78	62.853	ENSCGRG00000005069	Gpatch1	78	62.719	Cricetulus_griseus_crigri
ENSMODG00000012226	GPATCH1	91	40.233	ENSCSEG00000019456	-	84	60.550	Cynoglossus_semilaevis
ENSMODG00000012226	GPATCH1	93	51.554	ENSDARG00000033418	gpatch1	92	52.948	Danio_rerio
ENSMODG00000012226	GPATCH1	90	74.560	ENSDNOG00000005291	GPATCH1	95	74.560	Dasypus_novemcinctus
ENSMODG00000012226	GPATCH1	90	68.310	ENSDORG00000012546	Gpatch1	95	68.310	Dipodomys_ordii
ENSMODG00000012226	GPATCH1	99	64.952	ENSETEG00000003626	GPATCH1	92	66.197	Echinops_telfairi
ENSMODG00000012226	GPATCH1	94	34.848	ENSEBUG00000011286	gpatch1	91	35.550	Eptatretus_burgeri
ENSMODG00000012226	GPATCH1	90	73.697	ENSEASG00005021162	GPATCH1	93	73.728	Equus_asinus_asinus
ENSMODG00000012226	GPATCH1	90	74.413	ENSECAG00000022743	GPATCH1	88	74.413	Equus_caballus
ENSMODG00000012226	GPATCH1	76	75.490	ENSEEUG00000012925	GPATCH1	73	75.490	Erinaceus_europaeus
ENSMODG00000012226	GPATCH1	99	47.795	ENSELUG00000018195	gpatch1	91	49.212	Esox_lucius
ENSMODG00000012226	GPATCH1	100	72.853	ENSFCAG00000014917	GPATCH1	91	73.944	Felis_catus
ENSMODG00000012226	GPATCH1	99	60.824	ENSFALG00000007821	GPATCH1	91	61.272	Ficedula_albicollis
ENSMODG00000012226	GPATCH1	88	71.030	ENSFDAG00000003871	GPATCH1	92	70.545	Fukomys_damarensis
ENSMODG00000012226	GPATCH1	81	46.354	ENSGMOG00000003830	gpatch1	88	46.354	Gadus_morhua
ENSMODG00000012226	GPATCH1	93	61.818	ENSGALG00000004839	GPATCH1	94	62.194	Gallus_gallus
ENSMODG00000012226	GPATCH1	89	48.276	ENSGACG00000017544	gpatch1	93	48.436	Gasterosteus_aculeatus
ENSMODG00000012226	GPATCH1	100	65.470	ENSGAGG00000010067	GPATCH1	100	64.942	Gopherus_agassizii
ENSMODG00000012226	GPATCH1	98	69.322	ENSGGOG00000010862	GPATCH1	100	69.783	Gorilla_gorilla
ENSMODG00000012226	GPATCH1	81	53.248	ENSHBUG00000023462	gpatch1	90	51.642	Haplochromis_burtoni
ENSMODG00000012226	GPATCH1	100	70.094	ENSHGLG00000009334	GPATCH1	91	71.194	Heterocephalus_glaber_female
ENSMODG00000012226	GPATCH1	100	70.199	ENSHGLG00100018074	GPATCH1	91	71.311	Heterocephalus_glaber_male
ENSMODG00000012226	GPATCH1	94	49.732	ENSIPUG00000014977	gpatch1	90	51.525	Ictalurus_punctatus
ENSMODG00000012226	GPATCH1	90	73.036	ENSSTOG00000003720	GPATCH1	100	72.352	Ictidomys_tridecemlineatus
ENSMODG00000012226	GPATCH1	90	71.934	ENSJJAG00000023765	Gpatch1	100	67.906	Jaculus_jaculus
ENSMODG00000012226	GPATCH1	89	50.573	ENSKMAG00000017950	gpatch1	89	50.115	Kryptolebias_marmoratus
ENSMODG00000012226	GPATCH1	81	52.196	ENSLBEG00000026527	gpatch1	88	50.395	Labrus_bergylta
ENSMODG00000012226	GPATCH1	87	56.872	ENSLACG00000008130	GPATCH1	91	56.557	Latimeria_chalumnae
ENSMODG00000012226	GPATCH1	81	57.106	ENSLOCG00000001800	gpatch1	90	54.461	Lepisosteus_oculatus
ENSMODG00000012226	GPATCH1	90	74.765	ENSLAFG00000013589	GPATCH1	94	74.306	Loxodonta_africana
ENSMODG00000012226	GPATCH1	91	73.776	ENSMFAG00000034418	GPATCH1	95	74.556	Macaca_fascicularis
ENSMODG00000012226	GPATCH1	100	69.979	ENSMMUG00000011790	GPATCH1	100	69.979	Macaca_mulatta
ENSMODG00000012226	GPATCH1	100	69.524	ENSMNEG00000045084	GPATCH1	100	69.524	Macaca_nemestrina
ENSMODG00000012226	GPATCH1	100	59.216	ENSMLEG00000043840	GPATCH1	100	59.322	Mandrillus_leucophaeus
ENSMODG00000012226	GPATCH1	81	53.291	ENSMZEG00005001926	gpatch1	80	53.224	Maylandia_zebra
ENSMODG00000012226	GPATCH1	88	64.200	ENSMGAG00000005775	GPATCH1	91	63.349	Meleagris_gallopavo
ENSMODG00000012226	GPATCH1	89	66.235	ENSMICG00000004829	GPATCH1	93	66.471	Microcebus_murinus
ENSMODG00000012226	GPATCH1	90	70.444	ENSMOCG00000000174	Gpatch1	92	70.444	Microtus_ochrogaster
ENSMODG00000012226	GPATCH1	81	51.125	ENSMALG00000014386	gpatch1	82	51.824	Monopterus_albus
ENSMODG00000012226	GPATCH1	100	70.244	ENSMUSG00000063808	Gpatch1	100	85.714	Mus_musculus
ENSMODG00000012226	GPATCH1	100	70.296	MGP_PahariEiJ_G0012816	Gpatch1	100	86.735	Mus_pahari
ENSMODG00000012226	GPATCH1	100	70.042	MGP_SPRETEiJ_G0030681	Gpatch1	100	86.735	Mus_spretus
ENSMODG00000012226	GPATCH1	100	74.337	ENSMPUG00000007658	GPATCH1	91	75.352	Mustela_putorius_furo
ENSMODG00000012226	GPATCH1	100	70.308	ENSMLUG00000012161	GPATCH1	100	70.308	Myotis_lucifugus
ENSMODG00000012226	GPATCH1	100	69.108	ENSNGAG00000012455	Gpatch1	92	72.118	Nannospalax_galili
ENSMODG00000012226	GPATCH1	100	69.735	ENSNLEG00000007659	GPATCH1	100	69.735	Nomascus_leucogenys
ENSMODG00000012226	GPATCH1	78	78.202	ENSMEUG00000015174	GPATCH1	79	78.202	Notamacropus_eugenii
ENSMODG00000012226	GPATCH1	99	68.153	ENSODEG00000007103	GPATCH1	92	68.531	Octodon_degus
ENSMODG00000012226	GPATCH1	81	54.452	ENSONIG00000003302	gpatch1	90	51.139	Oreochromis_niloticus
ENSMODG00000012226	GPATCH1	99	71.064	ENSOANG00000012732	GPATCH1	99	70.138	Ornithorhynchus_anatinus
ENSMODG00000012226	GPATCH1	90	74.562	ENSOCUG00000015905	GPATCH1	91	74.562	Oryctolagus_cuniculus
ENSMODG00000012226	GPATCH1	89	49.299	ENSORLG00000018706	gpatch1	88	49.824	Oryzias_latipes
ENSMODG00000012226	GPATCH1	89	49.180	ENSOMEG00000022688	gpatch1	90	50.234	Oryzias_melastigma
ENSMODG00000012226	GPATCH1	83	75.607	ENSOGAG00000004016	GPATCH1	96	76.447	Otolemur_garnettii
ENSMODG00000012226	GPATCH1	89	74.614	ENSOARG00000004365	GPATCH1	99	70.192	Ovis_aries
ENSMODG00000012226	GPATCH1	100	70.476	ENSPPAG00000020990	GPATCH1	100	70.476	Pan_paniscus
ENSMODG00000012226	GPATCH1	100	72.853	ENSPPRG00000017245	GPATCH1	91	73.944	Panthera_pardus
ENSMODG00000012226	GPATCH1	100	73.701	ENSPTIG00000019649	GPATCH1	91	74.765	Panthera_tigris_altaica
ENSMODG00000012226	GPATCH1	100	70.476	ENSPTRG00000010803	GPATCH1	100	70.476	Pan_troglodytes
ENSMODG00000012226	GPATCH1	90	74.386	ENSPANG00000012374	GPATCH1	96	74.386	Papio_anubis
ENSMODG00000012226	GPATCH1	80	55.357	ENSPKIG00000020745	gpatch1	77	55.985	Paramormyrops_kingsleyae
ENSMODG00000012226	GPATCH1	99	64.021	ENSPSIG00000013433	GPATCH1	99	64.233	Pelodiscus_sinensis
ENSMODG00000012226	GPATCH1	100	69.108	ENSPEMG00000000636	Gpatch1	91	70.975	Peromyscus_maniculatus_bairdii
ENSMODG00000012226	GPATCH1	91	89.406	ENSPCIG00000021003	GPATCH1	97	89.419	Phascolarctos_cinereus
ENSMODG00000012226	GPATCH1	73	48.281	ENSPREG00000008264	gpatch1	97	43.478	Poecilia_reticulata
ENSMODG00000012226	GPATCH1	100	67.937	ENSPPYG00000009824	GPATCH1	100	67.937	Pongo_abelii
ENSMODG00000012226	GPATCH1	82	67.806	ENSPCAG00000005931	GPATCH1	84	68.144	Procavia_capensis
ENSMODG00000012226	GPATCH1	92	69.620	ENSPCOG00000009674	GPATCH1	96	70.686	Propithecus_coquereli
ENSMODG00000012226	GPATCH1	90	74.309	ENSPVAG00000017767	GPATCH1	78	73.706	Pteropus_vampyrus
ENSMODG00000012226	GPATCH1	81	53.708	ENSPNYG00000018189	gpatch1	89	54.278	Pundamilia_nyererei
ENSMODG00000012226	GPATCH1	89	52.655	ENSPNAG00000013187	gpatch1	90	52.655	Pygocentrus_nattereri
ENSMODG00000012226	GPATCH1	100	70.457	ENSRNOG00000011584	Gpatch1	91	72.019	Rattus_norvegicus
ENSMODG00000012226	GPATCH1	90	67.529	ENSRBIG00000034723	GPATCH1	92	67.333	Rhinopithecus_bieti
ENSMODG00000012226	GPATCH1	100	69.386	ENSRROG00000024428	GPATCH1	100	69.386	Rhinopithecus_roxellana
ENSMODG00000012226	GPATCH1	90	74.356	ENSSBOG00000034650	GPATCH1	100	71.005	Saimiri_boliviensis_boliviensis
ENSMODG00000012226	GPATCH1	99	87.566	ENSSHAG00000016016	GPATCH1	100	87.473	Sarcophilus_harrisii
ENSMODG00000012226	GPATCH1	81	56.549	ENSSFOG00015011535	gpatch1	89	54.545	Scleropages_formosus
ENSMODG00000012226	GPATCH1	94	54.881	ENSSMAG00000002883	gpatch1	88	55.748	Scophthalmus_maximus
ENSMODG00000012226	GPATCH1	81	52.553	ENSSDUG00000007444	gpatch1	90	50.557	Seriola_dumerili
ENSMODG00000012226	GPATCH1	81	52.218	ENSSLDG00000002856	gpatch1	89	52.618	Seriola_lalandi_dorsalis
ENSMODG00000012226	GPATCH1	72	78.158	ENSSARG00000004108	GPATCH1	72	78.158	Sorex_araneus
ENSMODG00000012226	GPATCH1	90	75.294	ENSSSCG00000002865	GPATCH1	94	75.529	Sus_scrofa
ENSMODG00000012226	GPATCH1	90	61.529	ENSTGUG00000009401	GPATCH1	92	62.000	Taeniopygia_guttata
ENSMODG00000012226	GPATCH1	81	51.476	ENSTRUG00000025081	gpatch1	90	49.538	Takifugu_rubripes
ENSMODG00000012226	GPATCH1	81	51.476	ENSTRUG00000005785	-	90	49.538	Takifugu_rubripes
ENSMODG00000012226	GPATCH1	81	50.948	ENSTNIG00000002554	gpatch1	97	51.341	Tetraodon_nigroviridis
ENSMODG00000012226	GPATCH1	63	64.246	ENSTBEG00000007750	-	84	64.246	Tupaia_belangeri
ENSMODG00000012226	GPATCH1	90	66.197	ENSTTRG00000012221	GPATCH1	91	66.354	Tursiops_truncatus
ENSMODG00000012226	GPATCH1	89	74.614	ENSUMAG00000014645	GPATCH1	96	75.124	Ursus_maritimus
ENSMODG00000012226	GPATCH1	79	88.571	ENSVPAG00000010313	GPATCH1	86	88.587	Vicugna_pacos
ENSMODG00000012226	GPATCH1	90	75.587	ENSVVUG00000016572	GPATCH1	91	75.587	Vulpes_vulpes
ENSMODG00000012226	GPATCH1	99	49.018	ENSXETG00000018276	gpatch1	94	53.806	Xenopus_tropicalis