EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000012300 (Gene tree)
Gene ID: 100011286
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 74858 bases
Position: chr5:1431786-1506643
Accession: 24704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000015406	La	PF05383.17	2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000015692	LARP1B-201	5320	-	ENSMODP00000015406	1129 (aa)	-	F7EJ80

Gene Model

Click here to download ENSMODG00000012300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000012300's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000012300	LARP1B	83	60.852	ENSMODG00000008663	LARP1	97	60.644

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000012300	LARP1B	94	78.373	ENSG00000138709	LARP1B	99	85.169	Homo_sapiens
ENSMODG00000012300	LARP1B	92	54.039	ENSAPOG00000020101	larp1b	91	54.366	Acanthochromis_polyacanthus
ENSMODG00000012300	LARP1B	90	52.828	ENSACIG00000023890	larp1b	85	55.590	Amphilophus_citrinellus
ENSMODG00000012300	LARP1B	81	53.448	ENSAOCG00000014268	larp1b	85	58.394	Amphiprion_ocellaris
ENSMODG00000012300	LARP1B	92	53.846	ENSAPEG00000004126	larp1b	91	55.042	Amphiprion_percula
ENSMODG00000012300	LARP1B	89	55.545	ENSATEG00000017849	larp1b	91	55.989	Anabas_testudineus
ENSMODG00000012300	LARP1B	80	72.932	ENSAPLG00000010129	LARP1B	100	72.903	Anas_platyrhynchos
ENSMODG00000012300	LARP1B	78	80.496	ENSACAG00000011338	LARP1B	93	76.907	Anolis_carolinensis
ENSMODG00000012300	LARP1B	81	66.703	ENSANAG00000034618	LARP1B	96	74.030	Aotus_nancymaae
ENSMODG00000012300	LARP1B	89	54.207	ENSACLG00000011948	larp1b	90	54.269	Astatotilapia_calliptera
ENSMODG00000012300	LARP1B	90	49.952	ENSAMXG00000006805	larp1b	87	50.911	Astyanax_mexicanus
ENSMODG00000012300	LARP1B	97	78.320	ENSBTAG00000012135	LARP1B	98	84.466	Bos_taurus
ENSMODG00000012300	LARP1B	81	84.842	ENSCJAG00000003338	LARP1B	98	87.879	Callithrix_jacchus
ENSMODG00000012300	LARP1B	83	86.966	ENSCAFG00000003831	LARP1B	100	86.325	Canis_familiaris
ENSMODG00000012300	LARP1B	83	86.966	ENSCAFG00020018899	LARP1B	100	86.247	Canis_lupus_dingo
ENSMODG00000012300	LARP1B	83	85.379	ENSCHIG00000023144	LARP1B	100	84.952	Capra_hircus
ENSMODG00000012300	LARP1B	81	85.496	ENSCCAG00000021948	LARP1B	98	87.273	Cebus_capucinus
ENSMODG00000012300	LARP1B	81	85.060	ENSCATG00000013541	LARP1B	99	84.515	Cercocebus_atys
ENSMODG00000012300	LARP1B	81	85.854	ENSCSAG00000003582	LARP1B	99	85.310	Chlorocebus_sabaeus
ENSMODG00000012300	LARP1B	81	78.393	ENSCHOG00000005354	LARP1B	100	77.850	Choloepus_hoffmanni
ENSMODG00000012300	LARP1B	92	77.810	ENSCPBG00000017480	LARP1B	93	78.384	Chrysemys_picta_bellii
ENSMODG00000012300	LARP1B	81	81.257	ENSCANG00000026958	LARP1B	99	80.715	Colobus_angolensis_palliatus
ENSMODG00000012300	LARP1B	86	53.333	ENSCSEG00000013519	larp1b	88	54.519	Cynoglossus_semilaevis
ENSMODG00000012300	LARP1B	89	54.231	ENSCVAG00000005046	larp1b	91	54.288	Cyprinodon_variegatus
ENSMODG00000012300	LARP1B	89	52.019	ENSDARG00000061169	larp1b	84	53.945	Danio_rerio
ENSMODG00000012300	LARP1B	72	81.513	ENSETEG00000012497	LARP1B	89	81.513	Echinops_telfairi
ENSMODG00000012300	LARP1B	79	52.836	ENSEBUG00000003668	larp1b	90	52.571	Eptatretus_burgeri
ENSMODG00000012300	LARP1B	83	85.363	ENSEASG00005018106	LARP1B	98	87.879	Equus_asinus_asinus
ENSMODG00000012300	LARP1B	97	78.771	ENSECAG00000001088	LARP1B	97	76.855	Equus_caballus
ENSMODG00000012300	LARP1B	55	55.210	ENSELUG00000023774	larp1b	73	73.743	Esox_lucius
ENSMODG00000012300	LARP1B	83	71.459	ENSFALG00000008098	LARP1B	100	71.459	Ficedula_albicollis
ENSMODG00000012300	LARP1B	90	54.131	ENSFHEG00000010264	larp1b	86	54.641	Fundulus_heteroclitus
ENSMODG00000012300	LARP1B	76	68.027	ENSGMOG00000005207	larp1b	79	68.367	Gadus_morhua
ENSMODG00000012300	LARP1B	89	69.712	ENSGALG00000010207	LARP1B	90	71.107	Gallus_gallus
ENSMODG00000012300	LARP1B	74	60.329	ENSGAFG00000012012	larp1b	97	58.679	Gambusia_affinis
ENSMODG00000012300	LARP1B	89	51.973	ENSGACG00000004609	larp1b	87	54.195	Gasterosteus_aculeatus
ENSMODG00000012300	LARP1B	91	77.928	ENSGAGG00000017209	LARP1B	93	78.286	Gopherus_agassizii
ENSMODG00000012300	LARP1B	81	85.714	ENSGGOG00000015900	LARP1B	99	85.169	Gorilla_gorilla
ENSMODG00000012300	LARP1B	89	54.381	ENSHBUG00000009730	larp1b	90	54.278	Haplochromis_burtoni
ENSMODG00000012300	LARP1B	62	61.625	ENSHCOG00000000918	larp1b	97	62.219	Hippocampus_comes
ENSMODG00000012300	LARP1B	90	50.926	ENSIPUG00000012138	larp1b	88	52.223	Ictalurus_punctatus
ENSMODG00000012300	LARP1B	86	54.183	ENSKMAG00000011589	larp1b	89	54.365	Kryptolebias_marmoratus
ENSMODG00000012300	LARP1B	87	55.713	ENSLBEG00000005655	larp1b	90	55.620	Labrus_bergylta
ENSMODG00000012300	LARP1B	96	67.676	ENSLACG00000015247	LARP1B	99	75.192	Latimeria_chalumnae
ENSMODG00000012300	LARP1B	82	68.229	ENSLOCG00000010684	larp1b	94	69.896	Lepisosteus_oculatus
ENSMODG00000012300	LARP1B	81	86.587	ENSMFAG00000002218	LARP1B	99	86.041	Macaca_fascicularis
ENSMODG00000012300	LARP1B	81	86.369	ENSMMUG00000021347	LARP1B	98	86.970	Macaca_mulatta
ENSMODG00000012300	LARP1B	72	86.436	ENSMNEG00000030406	LARP1B	97	85.714	Macaca_nemestrina
ENSMODG00000012300	LARP1B	81	82.443	ENSMLEG00000009306	LARP1B	99	82.334	Mandrillus_leucophaeus
ENSMODG00000012300	LARP1B	88	55.319	ENSMAMG00000000081	larp1b	91	55.609	Mastacembelus_armatus
ENSMODG00000012300	LARP1B	62	62.994	ENSMZEG00005002545	larp1b	98	59.209	Maylandia_zebra
ENSMODG00000012300	LARP1B	78	65.343	ENSMGAG00000004809	LARP1B	100	64.914	Meleagris_gallopavo
ENSMODG00000012300	LARP1B	81	88.877	ENSMICG00000036111	LARP1B	98	89.432	Microcebus_murinus
ENSMODG00000012300	LARP1B	90	54.218	ENSMALG00000003638	larp1b	89	55.029	Monopterus_albus
ENSMODG00000012300	LARP1B	98	79.838	ENSMPUG00000017365	LARP1B	96	79.208	Mustela_putorius_furo
ENSMODG00000012300	LARP1B	81	80.340	ENSMLUG00000010229	LARP1B	100	80.021	Myotis_lucifugus
ENSMODG00000012300	LARP1B	73	58.739	ENSNBRG00000023846	larp1b	87	53.957	Neolamprologus_brichardi
ENSMODG00000012300	LARP1B	81	85.512	ENSNLEG00000013819	LARP1B	99	85.403	Nomascus_leucogenys
ENSMODG00000012300	LARP1B	71	95.238	ENSMEUG00000010308	LARP1B	88	95.238	Notamacropus_eugenii
ENSMODG00000012300	LARP1B	81	68.962	ENSOPRG00000005478	LARP1B	99	69.180	Ochotona_princeps
ENSMODG00000012300	LARP1B	86	55.610	ENSONIG00000012386	larp1b	99	55.010	Oreochromis_niloticus
ENSMODG00000012300	LARP1B	83	84.295	ENSOCUG00000013330	LARP1B	100	83.868	Oryctolagus_cuniculus
ENSMODG00000012300	LARP1B	94	52.455	ENSORLG00000017954	larp1b	89	54.247	Oryzias_latipes
ENSMODG00000012300	LARP1B	95	52.347	ENSORLG00020013081	larp1b	89	54.344	Oryzias_latipes_hni
ENSMODG00000012300	LARP1B	95	52.708	ENSORLG00015009580	larp1b	89	54.633	Oryzias_latipes_hsok
ENSMODG00000012300	LARP1B	90	53.003	ENSOMEG00000004210	larp1b	89	54.388	Oryzias_melastigma
ENSMODG00000012300	LARP1B	80	86.333	ENSOGAG00000005771	LARP1B	100	85.667	Otolemur_garnettii
ENSMODG00000012300	LARP1B	81	85.512	ENSOARG00000015300	LARP1B	99	85.076	Ovis_aries
ENSMODG00000012300	LARP1B	81	85.605	ENSPPAG00000030439	LARP1B	99	85.060	Pan_paniscus
ENSMODG00000012300	LARP1B	81	85.605	ENSPTRG00000016437	LARP1B	99	85.060	Pan_troglodytes
ENSMODG00000012300	LARP1B	81	86.369	ENSPANG00000012488	LARP1B	99	85.823	Papio_anubis
ENSMODG00000012300	LARP1B	88	48.320	ENSPKIG00000014360	larp1b	92	52.179	Paramormyrops_kingsleyae
ENSMODG00000012300	LARP1B	86	79.630	ENSPSIG00000012885	LARP1B	99	80.289	Pelodiscus_sinensis
ENSMODG00000012300	LARP1B	64	62.345	ENSPMGG00000007207	larp1b	84	61.931	Periophthalmus_magnuspinnatus
ENSMODG00000012300	LARP1B	59	58.014	ENSPMAG00000002700	larp1b	98	54.536	Petromyzon_marinus
ENSMODG00000012300	LARP1B	84	95.122	ENSPCIG00000026516	LARP1B	100	95.319	Phascolarctos_cinereus
ENSMODG00000012300	LARP1B	90	53.611	ENSPFOG00000019519	larp1b	90	54.384	Poecilia_formosa
ENSMODG00000012300	LARP1B	54	48.518	ENSPFOG00000022837	-	86	49.447	Poecilia_formosa
ENSMODG00000012300	LARP1B	90	54.744	ENSPLAG00000007115	larp1b	89	55.153	Poecilia_latipinna
ENSMODG00000012300	LARP1B	90	54.606	ENSPMEG00000001224	larp1b	89	55.024	Poecilia_mexicana
ENSMODG00000012300	LARP1B	81	82.680	ENSPCAG00000007546	LARP1B	99	82.244	Procavia_capensis
ENSMODG00000012300	LARP1B	72	90.278	ENSPCOG00000021874	LARP1B	99	90.278	Propithecus_coquereli
ENSMODG00000012300	LARP1B	81	79.759	ENSPVAG00000005373	LARP1B	99	79.322	Pteropus_vampyrus
ENSMODG00000012300	LARP1B	62	64.040	ENSPNYG00000017357	larp1b	98	59.574	Pundamilia_nyererei
ENSMODG00000012300	LARP1B	86	52.067	ENSPNAG00000008823	larp1b	84	56.080	Pygocentrus_nattereri
ENSMODG00000012300	LARP1B	81	86.478	ENSRROG00000030771	LARP1B	98	86.970	Rhinopithecus_roxellana
ENSMODG00000012300	LARP1B	59	97.168	ENSSHAG00000014474	LARP1B	100	97.168	Sarcophilus_harrisii
ENSMODG00000012300	LARP1B	81	57.128	ENSSMAG00000006347	larp1b	92	57.620	Scophthalmus_maximus
ENSMODG00000012300	LARP1B	87	55.870	ENSSDUG00000004182	larp1b	90	54.796	Seriola_dumerili
ENSMODG00000012300	LARP1B	81	61.687	ENSSLDG00000014613	larp1b	86	60.385	Seriola_lalandi_dorsalis
ENSMODG00000012300	LARP1B	80	71.256	ENSSPUG00000011837	LARP1B	99	69.518	Sphenodon_punctatus
ENSMODG00000012300	LARP1B	89	55.491	ENSSPAG00000017772	larp1b	87	56.453	Stegastes_partitus
ENSMODG00000012300	LARP1B	97	77.367	ENSSSCG00000034280	LARP1B	99	91.753	Sus_scrofa
ENSMODG00000012300	LARP1B	79	65.769	ENSTGUG00000002098	-	97	68.687	Taeniopygia_guttata
ENSMODG00000012300	LARP1B	89	53.089	ENSTRUG00000005612	larp1b	88	53.922	Takifugu_rubripes
ENSMODG00000012300	LARP1B	76	63.845	ENSTNIG00000012398	larp1b	99	54.264	Tetraodon_nigroviridis
ENSMODG00000012300	LARP1B	71	84.762	ENSTBEG00000004177	LARP1B	88	84.762	Tupaia_belangeri
ENSMODG00000012300	LARP1B	81	78.214	ENSTTRG00000012984	LARP1B	99	77.778	Tursiops_truncatus
ENSMODG00000012300	LARP1B	83	86.645	ENSUMAG00000007373	LARP1B	100	86.004	Ursus_maritimus
ENSMODG00000012300	LARP1B	81	74.261	ENSVPAG00000007223	LARP1B	100	74.042	Vicugna_pacos
ENSMODG00000012300	LARP1B	83	86.859	ENSVVUG00000011307	LARP1B	99	87.671	Vulpes_vulpes
ENSMODG00000012300	LARP1B	82	59.979	ENSXETG00000022512	larp1b	89	61.266	Xenopus_tropicalis
ENSMODG00000012300	LARP1B	59	61.391	ENSXCOG00000004435	larp1b	72	59.463	Xiphophorus_couchianus
ENSMODG00000012300	LARP1B	88	55.664	ENSXMAG00000008150	larp1b	86	56.102	Xiphophorus_maculatus