EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMODG00000012470 (Gene tree)
Gene ID
100017199
Gene Symbol
SBNO1
Alias
FLJ10701|FLJ10833|MOP3|Sno
Full Name
strawberry notch homolog 1
Gene Type
protein_coding
Species
Monodelphis_domestica
Status
putative
Strand
Minus strand
Length
47686 bases
Position
chr3:487061463-487109148
Accession
22973
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMODP00000015607ResIIIPF04851.154.6e-0811
ENSMODP00000040424ResIIIPF04851.155.6e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMODT00000015896SBNO1-2014241-ENSMODP000000156071412 (aa)-F6Q4J8
ENSMODT00000043531SBNO1-2024681-ENSMODP000000404241459 (aa)-K7E3S2
Gene Model
Click here to download ENSMODG00000012470's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000012470's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMODG00000012470SBNO16867.120ENSMODG00000005382SBNO26867.120
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMODG00000012470SBNO19894.756ENSG00000139697SBNO19994.756Homo_sapiens
ENSMODG00000012470SBNO18180.534ENSAPOG00000003196sbno19880.620Acanthochromis_polyacanthus
ENSMODG00000012470SBNO19894.767ENSAMEG00000015151SBNO19994.767Ailuropoda_melanoleuca
ENSMODG00000012470SBNO19874.471ENSACIG00000008088sbno19973.880Amphilophus_citrinellus
ENSMODG00000012470SBNO19874.895ENSAOCG00000014859sbno19975.035Amphiprion_ocellaris
ENSMODG00000012470SBNO19874.895ENSAPEG00000006069sbno19975.035Amphiprion_percula
ENSMODG00000012470SBNO19875.893ENSATEG00000006667sbno19976.034Anabas_testudineus
ENSMODG00000012470SBNO19893.314ENSAPLG00000015674SBNO19993.314Anas_platyrhynchos
ENSMODG00000012470SBNO19988.364ENSACAG00000015441SBNO18888.699Anolis_carolinensis
ENSMODG00000012470SBNO19994.278ENSANAG00000029958-9994.540Aotus_nancymaae
ENSMODG00000012470SBNO19873.997ENSACLG00000024913sbno19974.056Astatotilapia_calliptera
ENSMODG00000012470SBNO19879.004ENSAMXG00000019473sbno19978.561Astyanax_mexicanus
ENSMODG00000012470SBNO19894.899ENSBTAG00000020505SBNO19994.899Bos_taurus
ENSMODG00000012470SBNO19894.971ENSCJAG00000016599SBNO19994.971Callithrix_jacchus
ENSMODG00000012470SBNO19895.050ENSCAFG00000007503SBNO19995.231Canis_familiaris
ENSMODG00000012470SBNO19894.253ENSCAFG00020015363SBNO19994.746Canis_lupus_dingo
ENSMODG00000012470SBNO19894.971ENSCHIG00000008382SBNO19994.971Capra_hircus
ENSMODG00000012470SBNO19895.187ENSTSYG00000012749SBNO19995.187Carlito_syrichta
ENSMODG00000012470SBNO19494.662ENSCAPG00000000384SBNO19997.101Cavia_aperea
ENSMODG00000012470SBNO19894.109ENSCPOG00000008109SBNO19997.101Cavia_porcellus
ENSMODG00000012470SBNO19890.739ENSCCAG00000035316SBNO19990.668Cebus_capucinus
ENSMODG00000012470SBNO19794.006ENSCATG00000008239SBNO19897.464Cercocebus_atys
ENSMODG00000012470SBNO19894.181ENSCLAG00000008995SBNO19997.283Chinchilla_lanigera
ENSMODG00000012470SBNO18296.716ENSCSAG00000002064SBNO19996.716Chlorocebus_sabaeus
ENSMODG00000012470SBNO19491.442ENSCHOG00000008814SBNO19690.962Choloepus_hoffmanni
ENSMODG00000012470SBNO19993.396ENSCPBG00000025968SBNO19993.108Chrysemys_picta_bellii
ENSMODG00000012470SBNO19889.742ENSCANG00000042688-9989.885Colobus_angolensis_palliatus
ENSMODG00000012470SBNO19894.253ENSCGRG00001017470Sbno19996.558Cricetulus_griseus_chok1gshd
ENSMODG00000012470SBNO19894.253ENSCGRG00000004756Sbno19996.558Cricetulus_griseus_crigri
ENSMODG00000012470SBNO19874.491ENSCSEG00000011919sbno19975.123Cynoglossus_semilaevis
ENSMODG00000012470SBNO19875.353ENSCVAG00000007038sbno19975.105Cyprinodon_variegatus
ENSMODG00000012470SBNO19879.128ENSDARG00000099080sbno19979.628Danio_rerio
ENSMODG00000012470SBNO19893.715ENSDNOG00000017147SBNO19894.450Dasypus_novemcinctus
ENSMODG00000012470SBNO19293.405ENSDORG00000015261Sbno19994.590Dipodomys_ordii
ENSMODG00000012470SBNO19288.050ENSETEG00000005620SBNO19388.050Echinops_telfairi
ENSMODG00000012470SBNO17562.374ENSEBUG00000013823sbno19462.063Eptatretus_burgeri
ENSMODG00000012470SBNO15091.537ENSEASG00005012595-9291.537Equus_asinus_asinus
ENSMODG00000012470SBNO19895.259ENSECAG00000006127SBNO19995.259Equus_caballus
ENSMODG00000012470SBNO18196.154ENSEEUG00000003793SBNO18396.154Erinaceus_europaeus
ENSMODG00000012470SBNO19877.817ENSELUG00000002886sbno19978.114Esox_lucius
ENSMODG00000012470SBNO19995.190ENSFCAG00000015331SBNO110095.190Felis_catus
ENSMODG00000012470SBNO19893.386ENSFALG00000009273SBNO19993.386Ficedula_albicollis
ENSMODG00000012470SBNO19892.601ENSFDAG00000014232SBNO19992.601Fukomys_damarensis
ENSMODG00000012470SBNO19875.637ENSFHEG00000007360sbno19975.617Fundulus_heteroclitus
ENSMODG00000012470SBNO19378.032ENSGMOG00000018229sbno19978.615Gadus_morhua
ENSMODG00000012470SBNO18793.496ENSGALG00000003392SBNO19993.252Gallus_gallus
ENSMODG00000012470SBNO19875.760ENSGAFG00000003960sbno19975.545Gambusia_affinis
ENSMODG00000012470SBNO19378.712ENSGACG00000015633sbno19978.225Gasterosteus_aculeatus
ENSMODG00000012470SBNO19892.595ENSGAGG00000001065SBNO19992.279Gopherus_agassizii
ENSMODG00000012470SBNO19894.828ENSGGOG00000015000SBNO19997.464Gorilla_gorilla
ENSMODG00000012470SBNO19868.477ENSHBUG00000011910sbno19968.563Haplochromis_burtoni
ENSMODG00000012470SBNO19893.894ENSHGLG00000014165-9994.109Heterocephalus_glaber_female
ENSMODG00000012470SBNO19383.784ENSHCOG00000003246sbno19585.375Hippocampus_comes
ENSMODG00000012470SBNO19978.683ENSIPUG00000015830Sbno19878.895Ictalurus_punctatus
ENSMODG00000012470SBNO19895.043ENSSTOG00000023221SBNO19997.101Ictidomys_tridecemlineatus
ENSMODG00000012470SBNO19894.899ENSJJAG00000001741Sbno19994.468Jaculus_jaculus
ENSMODG00000012470SBNO19875.584ENSKMAG00000009696sbno19975.527Kryptolebias_marmoratus
ENSMODG00000012470SBNO19875.456ENSLBEG00000007623sbno19975.666Labrus_bergylta
ENSMODG00000012470SBNO19881.916ENSLACG00000017227SBNO19984.291Latimeria_chalumnae
ENSMODG00000012470SBNO19982.057ENSLOCG00000005725sbno19882.199Lepisosteus_oculatus
ENSMODG00000012470SBNO19893.894ENSLAFG00000002135SBNO19993.835Loxodonta_africana
ENSMODG00000012470SBNO19895.187ENSMFAG00000031429SBNO19994.899Macaca_fascicularis
ENSMODG00000012470SBNO19895.187ENSMMUG00000011496SBNO19994.899Macaca_mulatta
ENSMODG00000012470SBNO19893.175ENSMLEG00000033260SBNO19997.464Mandrillus_leucophaeus
ENSMODG00000012470SBNO19876.076ENSMAMG00000005473sbno19975.989Mastacembelus_armatus
ENSMODG00000012470SBNO19893.386ENSMGAG00000003274SBNO19993.386Meleagris_gallopavo
ENSMODG00000012470SBNO15089.700ENSMAUG00000004834-10090.272Mesocricetus_auratus
ENSMODG00000012470SBNO19894.037ENSMICG00000006573-9994.037Microcebus_murinus
ENSMODG00000012470SBNO19496.403ENSMOCG00000009390Sbno19996.920Microtus_ochrogaster
ENSMODG00000012470SBNO19871.519ENSMMOG00000008691sbno19971.398Mola_mola
ENSMODG00000012470SBNO19874.982ENSMALG00000001056sbno19974.982Monopterus_albus
ENSMODG00000012470SBNO19994.042MGP_CAROLIEiJ_G0027749Sbno110093.683Mus_caroli
ENSMODG00000012470SBNO19994.042ENSMUSG00000038095Sbno110093.898Mus_musculus
ENSMODG00000012470SBNO19994.899MGP_PahariEiJ_G0024329Sbno110094.393Mus_pahari
ENSMODG00000012470SBNO19993.826MGP_SPRETEiJ_G0028747Sbno110093.683Mus_spretus
ENSMODG00000012470SBNO19895.043ENSMPUG00000001658SBNO19995.043Mustela_putorius_furo
ENSMODG00000012470SBNO19894.397ENSMLUG00000017159SBNO19994.397Myotis_lucifugus
ENSMODG00000012470SBNO19894.684ENSNGAG00000012620Sbno19897.239Nannospalax_galili
ENSMODG00000012470SBNO19873.873ENSNBRG00000019189sbno19973.932Neolamprologus_brichardi
ENSMODG00000012470SBNO19891.020ENSNLEG00000001502SBNO19991.020Nomascus_leucogenys
ENSMODG00000012470SBNO16199.359ENSMEUG00000008768-9399.359Notamacropus_eugenii
ENSMODG00000012470SBNO19891.463ENSOPRG00000011054SBNO19991.679Ochotona_princeps
ENSMODG00000012470SBNO19894.325ENSODEG00000009997SBNO19996.920Octodon_degus
ENSMODG00000012470SBNO19875.387ENSONIG00000015348sbno19975.245Oreochromis_niloticus
ENSMODG00000012470SBNO19793.435ENSOCUG00000002441SBNO19593.508Oryctolagus_cuniculus
ENSMODG00000012470SBNO19874.876ENSORLG00000001593sbno19974.690Oryzias_latipes
ENSMODG00000012470SBNO19875.000ENSORLG00020015216sbno19974.647Oryzias_latipes_hni
ENSMODG00000012470SBNO19874.824ENSORLG00015002726sbno19974.542Oryzias_latipes_hsok
ENSMODG00000012470SBNO19874.929ENSOMEG00000019313sbno19974.470Oryzias_melastigma
ENSMODG00000012470SBNO15086.981ENSOGAG00000010781-10087.983Otolemur_garnettii
ENSMODG00000012470SBNO19894.763ENSOARG00000004404SBNO19994.763Ovis_aries
ENSMODG00000012470SBNO19894.612ENSPPAG00000024635SBNO19997.283Pan_paniscus
ENSMODG00000012470SBNO19995.190ENSPPRG00000022092SBNO110095.190Panthera_pardus
ENSMODG00000012470SBNO19894.756ENSPTIG00000017803SBNO19994.899Panthera_tigris_altaica
ENSMODG00000012470SBNO19894.684ENSPTRG00000005597SBNO19997.464Pan_troglodytes
ENSMODG00000012470SBNO19894.828ENSPANG00000011640SBNO19997.464Papio_anubis
ENSMODG00000012470SBNO19880.615ENSPKIG00000001441sbno19980.601Paramormyrops_kingsleyae
ENSMODG00000012470SBNO19189.130ENSPSIG00000009256-10088.889Pelodiscus_sinensis
ENSMODG00000012470SBNO19892.632ENSPSIG00000009572-9992.632Pelodiscus_sinensis
ENSMODG00000012470SBNO19893.966ENSPEMG00000016087Sbno19996.558Peromyscus_maniculatus_bairdii
ENSMODG00000012470SBNO19999.210ENSPCIG00000010985SBNO110099.210Phascolarctos_cinereus
ENSMODG00000012470SBNO19876.130ENSPFOG00000005069sbno19975.913Poecilia_formosa
ENSMODG00000012470SBNO19875.918ENSPLAG00000015015sbno19976.107Poecilia_latipinna
ENSMODG00000012470SBNO19876.147ENSPMEG00000021212sbno19975.930Poecilia_mexicana
ENSMODG00000012470SBNO19875.865ENSPREG00000017746sbno19975.649Poecilia_reticulata
ENSMODG00000012470SBNO19894.899ENSPPYG00000005084SBNO19994.828Pongo_abelii
ENSMODG00000012470SBNO18790.137ENSPCAG00000008634SBNO18890.096Procavia_capensis
ENSMODG00000012470SBNO19895.259ENSPCOG00000024277SBNO19997.086Propithecus_coquereli
ENSMODG00000012470SBNO18696.620ENSPVAG00000015304SBNO18796.620Pteropus_vampyrus
ENSMODG00000012470SBNO19875.634ENSPNYG00000004291sbno19975.281Pundamilia_nyererei
ENSMODG00000012470SBNO19878.820ENSPNAG00000015622sbno19978.749Pygocentrus_nattereri
ENSMODG00000012470SBNO19994.042ENSRNOG00000001064Sbno19996.926Rattus_norvegicus
ENSMODG00000012470SBNO19894.899ENSRROG00000034230SBNO19997.464Rhinopithecus_roxellana
ENSMODG00000012470SBNO19589.501ENSSBOG00000015422SBNO19989.501Saimiri_boliviensis_boliviensis
ENSMODG00000012470SBNO19879.128ENSSFOG00015019025sbno19979.757Scleropages_formosus
ENSMODG00000012470SBNO19875.636ENSSMAG00000013640sbno19975.901Scophthalmus_maximus
ENSMODG00000012470SBNO19875.351ENSSDUG00000023480sbno19975.351Seriola_dumerili
ENSMODG00000012470SBNO19875.281ENSSLDG00000007928sbno19975.281Seriola_lalandi_dorsalis
ENSMODG00000012470SBNO18895.138ENSSARG00000002594SBNO18994.976Sorex_araneus
ENSMODG00000012470SBNO19890.144ENSSPUG00000012640SBNO19990.144Sphenodon_punctatus
ENSMODG00000012470SBNO19874.930ENSSPAG00000016244sbno19975.000Stegastes_partitus
ENSMODG00000012470SBNO19895.187ENSSSCG00000009776SBNO19995.402Sus_scrofa
ENSMODG00000012470SBNO19893.242ENSTGUG00000005380SBNO19993.242Taeniopygia_guttata
ENSMODG00000012470SBNO19875.088ENSTRUG00000018490sbno110075.176Takifugu_rubripes
ENSMODG00000012470SBNO15570.050ENSTNIG00000013506sbno19969.950Tetraodon_nigroviridis
ENSMODG00000012470SBNO19895.115ENSUAMG00000019671SBNO19995.115Ursus_americanus
ENSMODG00000012470SBNO19895.115ENSUMAG00000004002SBNO19995.115Ursus_maritimus
ENSMODG00000012470SBNO19489.774ENSVPAG00000007024SBNO19589.774Vicugna_pacos
ENSMODG00000012470SBNO19895.187ENSVVUG00000027807SBNO19995.187Vulpes_vulpes
ENSMODG00000012470SBNO19982.788ENSXETG00000031930SBNO110082.432Xenopus_tropicalis
ENSMODG00000012470SBNO18774.281ENSXCOG00000011607sbno19574.859Xiphophorus_couchianus
ENSMODG00000012470SBNO19876.076ENSXMAG00000002140sbno19976.053Xiphophorus_maculatus

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