EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000012600 (Gene tree)
Gene ID: 100616670
Gene Symbol: GFI1B
Alias: ZNF163B
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 21953 bases
Position: chr1:460061089-460083041
Accession: 100616670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000015764	zf-C2H2	PF00096.26	3.2e-28	1	5
ENSMODP00000015764	zf-C2H2	PF00096.26	3.2e-28	2	5
ENSMODP00000015764	zf-C2H2	PF00096.26	3.2e-28	3	5
ENSMODP00000015764	zf-C2H2	PF00096.26	3.2e-28	4	5
ENSMODP00000015764	zf-C2H2	PF00096.26	3.2e-28	5	5
ENSMODP00000015764	zf-met	PF12874.7	2e-06	1	2
ENSMODP00000015764	zf-met	PF12874.7	2e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000016054	GFI1B-201	2430	-	ENSMODP00000015764	356 (aa)	XP_003339686	F6PI76

Gene Model

Click here to download ENSMODG00000012600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000012600's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000012600	GFI1B	100	53.406	ENSAPOG00000001296	gfi1b	100	53.406	Acanthochromis_polyacanthus
ENSMODG00000012600	GFI1B	99	52.101	ENSACIG00000002190	gfi1b	99	52.101	Amphilophus_citrinellus
ENSMODG00000012600	GFI1B	100	53.740	ENSAOCG00000021187	gfi1b	100	53.740	Amphiprion_ocellaris
ENSMODG00000012600	GFI1B	100	54.420	ENSAPEG00000016196	gfi1b	100	54.420	Amphiprion_percula
ENSMODG00000012600	GFI1B	100	54.247	ENSATEG00000002534	gfi1b	100	54.247	Anabas_testudineus
ENSMODG00000012600	GFI1B	100	63.243	ENSAPLG00000003373	GFI1B	100	63.243	Anas_platyrhynchos
ENSMODG00000012600	GFI1B	99	49.606	ENSACLG00000027053	gfi1b	99	49.606	Astatotilapia_calliptera
ENSMODG00000012600	GFI1B	100	55.228	ENSAMXG00000037544	GFI1B	100	55.228	Astyanax_mexicanus
ENSMODG00000012600	GFI1B	100	69.613	ENSCAPG00000010404	GFI1B	100	69.613	Cavia_aperea
ENSMODG00000012600	GFI1B	100	63.733	ENSCPBG00000021186	GFI1B	100	63.733	Chrysemys_picta_bellii
ENSMODG00000012600	GFI1B	100	53.571	ENSCSEG00000001315	gfi1b	100	53.571	Cynoglossus_semilaevis
ENSMODG00000012600	GFI1B	100	55.191	ENSCVAG00000017168	gfi1b	100	55.191	Cyprinodon_variegatus
ENSMODG00000012600	GFI1B	100	55.135	ENSDARG00000079947	gfi1b	99	67.407	Danio_rerio
ENSMODG00000012600	GFI1B	62	94.828	ENSEEUG00000012609	-	75	94.828	Erinaceus_europaeus
ENSMODG00000012600	GFI1B	100	53.543	ENSELUG00000016933	gfi1b	100	53.543	Esox_lucius
ENSMODG00000012600	GFI1B	100	66.033	ENSFALG00000001479	GFI1B	100	66.033	Ficedula_albicollis
ENSMODG00000012600	GFI1B	100	53.151	ENSFHEG00000015138	gfi1b	100	53.151	Fundulus_heteroclitus
ENSMODG00000012600	GFI1B	75	66.171	ENSGMOG00000019123	gfi1b	88	66.171	Gadus_morhua
ENSMODG00000012600	GFI1B	100	64.611	ENSGALG00000003478	GFI1B	100	64.611	Gallus_gallus
ENSMODG00000012600	GFI1B	74	65.283	ENSGAFG00000003059	gfi1b	98	65.283	Gambusia_affinis
ENSMODG00000012600	GFI1B	100	48.866	ENSGACG00000018134	gfi1b	100	48.866	Gasterosteus_aculeatus
ENSMODG00000012600	GFI1B	100	65.761	ENSGAGG00000021327	GFI1B	100	65.761	Gopherus_agassizii
ENSMODG00000012600	GFI1B	99	49.606	ENSHBUG00000005451	gfi1b	99	49.606	Haplochromis_burtoni
ENSMODG00000012600	GFI1B	100	53.388	ENSHCOG00000013713	gfi1b	100	54.420	Hippocampus_comes
ENSMODG00000012600	GFI1B	100	55.556	ENSIPUG00000012769	gfi1b	100	55.556	Ictalurus_punctatus
ENSMODG00000012600	GFI1B	99	70.765	ENSJJAG00000016355	Gfi1b	100	70.765	Jaculus_jaculus
ENSMODG00000012600	GFI1B	100	53.846	ENSKMAG00000016047	gfi1b	100	53.846	Kryptolebias_marmoratus
ENSMODG00000012600	GFI1B	100	53.846	ENSLBEG00000020297	gfi1b	99	53.846	Labrus_bergylta
ENSMODG00000012600	GFI1B	100	58.311	ENSLACG00000012207	GFI1B	100	58.311	Latimeria_chalumnae
ENSMODG00000012600	GFI1B	100	55.405	ENSLOCG00000005750	gfi1b	100	55.405	Lepisosteus_oculatus
ENSMODG00000012600	GFI1B	100	68.044	ENSLAFG00000022367	GFI1B	100	68.320	Loxodonta_africana
ENSMODG00000012600	GFI1B	100	54.190	ENSMAMG00000003040	gfi1b	100	54.190	Mastacembelus_armatus
ENSMODG00000012600	GFI1B	99	49.606	ENSMZEG00005015594	gfi1b	99	49.606	Maylandia_zebra
ENSMODG00000012600	GFI1B	100	64.247	ENSMGAG00000006129	GFI1B	100	64.247	Meleagris_gallopavo
ENSMODG00000012600	GFI1B	100	53.352	ENSMMOG00000011764	gfi1b	100	53.352	Mola_mola
ENSMODG00000012600	GFI1B	100	53.425	ENSMALG00000004034	gfi1b	100	53.425	Monopterus_albus
ENSMODG00000012600	GFI1B	99	74.238	ENSNGAG00000003333	Gfi1b	100	74.238	Nannospalax_galili
ENSMODG00000012600	GFI1B	56	51.497	ENSNBRG00000012376	-	99	51.497	Neolamprologus_brichardi
ENSMODG00000012600	GFI1B	99	51.070	ENSNBRG00000012391	gfi1b	99	51.070	Neolamprologus_brichardi
ENSMODG00000012600	GFI1B	99	51.733	ENSONIG00000013011	gfi1b	94	69.340	Oreochromis_niloticus
ENSMODG00000012600	GFI1B	100	71.788	ENSOANG00000014723	GFI1B	100	71.788	Ornithorhynchus_anatinus
ENSMODG00000012600	GFI1B	100	92.793	ENSORLG00000014390	GFI1B	96	45.000	Oryzias_latipes
ENSMODG00000012600	GFI1B	100	52.304	ENSORLG00020003719	GFI1B	100	52.304	Oryzias_latipes_hni
ENSMODG00000012600	GFI1B	100	51.762	ENSORLG00015017142	gfi1b	100	51.762	Oryzias_latipes_hsok
ENSMODG00000012600	GFI1B	100	52.055	ENSOMEG00000015149	GFI1B	100	52.198	Oryzias_melastigma
ENSMODG00000012600	GFI1B	100	67.582	ENSOGAG00000008879	GFI1B	100	67.760	Otolemur_garnettii
ENSMODG00000012600	GFI1B	100	55.496	ENSPKIG00000007643	gfi1b	100	55.496	Paramormyrops_kingsleyae
ENSMODG00000012600	GFI1B	100	64.191	ENSPSIG00000012112	GFI1B	100	64.191	Pelodiscus_sinensis
ENSMODG00000012600	GFI1B	99	51.771	ENSPMGG00000006021	gfi1b	99	52.316	Periophthalmus_magnuspinnatus
ENSMODG00000012600	GFI1B	100	89.415	ENSPCIG00000019724	GFI1B	100	89.415	Phascolarctos_cinereus
ENSMODG00000012600	GFI1B	100	53.067	ENSPFOG00000003460	gfi1b	100	53.067	Poecilia_formosa
ENSMODG00000012600	GFI1B	100	53.316	ENSPLAG00000017181	GFI1B	100	53.316	Poecilia_latipinna
ENSMODG00000012600	GFI1B	100	52.830	ENSPLAG00000021960	GFI1B	100	52.830	Poecilia_latipinna
ENSMODG00000012600	GFI1B	100	52.561	ENSPMEG00000001556	GFI1B	100	52.561	Poecilia_mexicana
ENSMODG00000012600	GFI1B	100	52.561	ENSPMEG00000019220	gfi1b	100	52.561	Poecilia_mexicana
ENSMODG00000012600	GFI1B	100	52.973	ENSPREG00000021718	gfi1b	100	52.973	Poecilia_reticulata
ENSMODG00000012600	GFI1B	99	49.735	ENSPNYG00000018422	gfi1b	99	49.735	Pundamilia_nyererei
ENSMODG00000012600	GFI1B	100	55.228	ENSPNAG00000021118	gfi1b	100	55.228	Pygocentrus_nattereri
ENSMODG00000012600	GFI1B	100	77.437	ENSSHAG00000006462	GFI1B	100	77.437	Sarcophilus_harrisii
ENSMODG00000012600	GFI1B	98	47.239	ENSSFOG00015011566	gfi1b	90	47.239	Scleropages_formosus
ENSMODG00000012600	GFI1B	99	53.591	ENSSMAG00000015181	gfi1b	99	53.005	Scophthalmus_maximus
ENSMODG00000012600	GFI1B	100	52.703	ENSSDUG00000011604	gfi1b	100	52.703	Seriola_dumerili
ENSMODG00000012600	GFI1B	100	53.243	ENSSLDG00000013823	gfi1b	100	53.243	Seriola_lalandi_dorsalis
ENSMODG00000012600	GFI1B	100	55.556	ENSSPUG00000016039	GFI1B	100	55.556	Sphenodon_punctatus
ENSMODG00000012600	GFI1B	100	53.994	ENSSPAG00000022914	gfi1b	100	53.994	Stegastes_partitus
ENSMODG00000012600	GFI1B	58	99.123	ENSTGUG00000005282	-	100	99.123	Taeniopygia_guttata
ENSMODG00000012600	GFI1B	62	66.234	ENSTGUG00000015953	-	81	66.234	Taeniopygia_guttata
ENSMODG00000012600	GFI1B	100	52.617	ENSTRUG00000004525	gfi1b	100	52.617	Takifugu_rubripes
ENSMODG00000012600	GFI1B	100	52.747	ENSTNIG00000003834	gfi1b	100	52.747	Tetraodon_nigroviridis
ENSMODG00000012600	GFI1B	89	98.276	ENSTBEG00000014459	GFI1B	83	98.276	Tupaia_belangeri
ENSMODG00000012600	GFI1B	100	56.403	ENSXETG00000006263	gfi1b	100	57.065	Xenopus_tropicalis
ENSMODG00000012600	GFI1B	100	52.973	ENSXMAG00000027589	gfi1b	100	52.973	Xiphophorus_maculatus