EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000012887 (Gene tree)
Gene ID: 100023813
Gene Symbol: -
Alias: -
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 74279 bases
Position: chr1:325154881-325229159
Accession: 100023813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000016122	PAP_RNA-bind	PF04926.15	4.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000016420	-	2544	-	ENSMODP00000016122	738 (aa)	XP_001375249	F6Z1A8

Gene Model

Click here to download ENSMODG00000012887's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000012887's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000012887	-	98	59.730	ENSMODG00000002160	PAPOLG	98	59.623
ENSMODG00000012887	-	99	83.333	ENSMODG00000001969	-	99	83.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000012887	-	100	96.242	ENSG00000090060	PAPOLA	99	98.182	Homo_sapiens
ENSMODG00000012887	-	99	96.748	ENSAMEG00000014142	PAPOLA	99	96.748	Ailuropoda_melanoleuca
ENSMODG00000012887	-	99	92.005	ENSAPLG00000006645	PAPOLA	99	91.452	Anas_platyrhynchos
ENSMODG00000012887	-	99	93.234	ENSACAG00000013474	PAPOLA	99	96.662	Anolis_carolinensis
ENSMODG00000012887	-	72	90.637	ENSANAG00000027941	-	98	90.637	Aotus_nancymaae
ENSMODG00000012887	-	100	96.107	ENSANAG00000018274	PAPOLA	99	98.346	Aotus_nancymaae
ENSMODG00000012887	-	100	71.081	ENSAMXG00000018141	papola	99	84.353	Astyanax_mexicanus
ENSMODG00000012887	-	100	96.482	ENSBTAG00000004054	PAPOLA	100	96.482	Bos_taurus
ENSMODG00000012887	-	100	96.107	ENSCJAG00000006512	PAPOLA	99	98.346	Callithrix_jacchus
ENSMODG00000012887	-	100	96.376	ENSCAFG00000017783	PAPOLA	100	96.376	Canis_familiaris
ENSMODG00000012887	-	100	96.888	ENSCAFG00020011550	PAPOLA	100	96.888	Canis_lupus_dingo
ENSMODG00000012887	-	100	96.211	ENSCHIG00000025004	-	100	96.211	Capra_hircus
ENSMODG00000012887	-	99	96.467	ENSTSYG00000012384	PAPOLA	99	96.467	Carlito_syrichta
ENSMODG00000012887	-	100	92.016	ENSCPOG00000002648	PAPOLA	100	92.016	Cavia_porcellus
ENSMODG00000012887	-	100	96.242	ENSCCAG00000025120	PAPOLA	100	96.242	Cebus_capucinus
ENSMODG00000012887	-	100	96.376	ENSCATG00000018815	PAPOLA	99	98.696	Cercocebus_atys
ENSMODG00000012887	-	100	95.940	ENSCLAG00000016342	PAPOLA	100	95.940	Chinchilla_lanigera
ENSMODG00000012887	-	100	96.376	ENSCSAG00000010516	PAPOLA	100	96.376	Chlorocebus_sabaeus
ENSMODG00000012887	-	72	82.561	ENSCHOG00000001115	PAPOLA	72	82.561	Choloepus_hoffmanni
ENSMODG00000012887	-	100	93.784	ENSCPBG00000024125	PAPOLA	100	93.784	Chrysemys_picta_bellii
ENSMODG00000012887	-	99	91.117	ENSCANG00000000159	PAPOLA	100	91.117	Colobus_angolensis_palliatus
ENSMODG00000012887	-	100	87.686	ENSCGRG00001000229	-	99	89.228	Cricetulus_griseus_chok1gshd
ENSMODG00000012887	-	100	95.399	ENSCGRG00001022693	-	100	95.399	Cricetulus_griseus_chok1gshd
ENSMODG00000012887	-	99	83.604	ENSCGRG00001002732	-	99	83.604	Cricetulus_griseus_chok1gshd
ENSMODG00000012887	-	100	95.007	ENSCGRG00000003664	-	100	95.380	Cricetulus_griseus_crigri
ENSMODG00000012887	-	100	81.326	ENSCGRG00000000257	-	100	81.326	Cricetulus_griseus_crigri
ENSMODG00000012887	-	98	80.303	ENSCGRG00000001888	-	96	79.614	Cricetulus_griseus_crigri
ENSMODG00000012887	-	65	53.734	ENSCSEG00000001841	-	71	53.734	Cynoglossus_semilaevis
ENSMODG00000012887	-	100	70.950	ENSDARG00000009585	papola	100	70.470	Danio_rerio
ENSMODG00000012887	-	66	87.526	ENSDORG00000013415	-	100	87.805	Dipodomys_ordii
ENSMODG00000012887	-	99	83.582	ENSETEG00000004889	PAPOLA	100	83.446	Echinops_telfairi
ENSMODG00000012887	-	100	67.797	ENSELUG00000018972	papola	100	67.670	Esox_lucius
ENSMODG00000012887	-	100	97.564	ENSFCAG00000006784	PAPOLA	100	97.564	Felis_catus
ENSMODG00000012887	-	99	89.211	ENSFALG00000002547	PAPOLA	98	89.211	Ficedula_albicollis
ENSMODG00000012887	-	99	94.587	ENSFDAG00000010370	PAPOLA	100	94.587	Fukomys_damarensis
ENSMODG00000012887	-	73	66.606	ENSGMOG00000010209	papola	100	66.972	Gadus_morhua
ENSMODG00000012887	-	100	91.351	ENSGALG00000033099	PAPOLA	100	91.081	Gallus_gallus
ENSMODG00000012887	-	65	54.583	ENSGACG00000006142	-	100	54.167	Gasterosteus_aculeatus
ENSMODG00000012887	-	90	96.073	ENSGAGG00000020500	PAPOLA	99	96.073	Gopherus_agassizii
ENSMODG00000012887	-	100	96.242	ENSGGOG00000006287	PAPOLA	100	96.242	Gorilla_gorilla
ENSMODG00000012887	-	99	83.902	ENSHGLG00000017457	-	100	83.356	Heterocephalus_glaber_female
ENSMODG00000012887	-	100	95.399	ENSHGLG00000007909	-	100	95.399	Heterocephalus_glaber_female
ENSMODG00000012887	-	100	74.966	ENSHGLG00000007467	-	100	77.402	Heterocephalus_glaber_female
ENSMODG00000012887	-	100	95.264	ENSHGLG00100017273	PAPOLA	100	95.264	Heterocephalus_glaber_male
ENSMODG00000012887	-	100	67.557	ENSIPUG00000005919	papola	100	66.541	Ictalurus_punctatus
ENSMODG00000012887	-	100	97.158	ENSSTOG00000011471	PAPOLA	100	97.158	Ictidomys_tridecemlineatus
ENSMODG00000012887	-	99	95.380	ENSJJAG00000024340	Papola	100	95.380	Jaculus_jaculus
ENSMODG00000012887	-	99	77.598	ENSLACG00000018136	PAPOLA	99	77.598	Latimeria_chalumnae
ENSMODG00000012887	-	99	65.775	ENSLOCG00000008632	papola	99	65.909	Lepisosteus_oculatus
ENSMODG00000012887	-	99	96.467	ENSLAFG00000000946	PAPOLA	99	96.467	Loxodonta_africana
ENSMODG00000012887	-	100	96.376	ENSMFAG00000001792	PAPOLA	99	98.521	Macaca_fascicularis
ENSMODG00000012887	-	100	96.376	ENSMMUG00000018610	PAPOLA	100	96.376	Macaca_mulatta
ENSMODG00000012887	-	100	96.376	ENSMNEG00000043747	PAPOLA	99	97.426	Macaca_nemestrina
ENSMODG00000012887	-	100	96.376	ENSMLEG00000032066	PAPOLA	100	96.376	Mandrillus_leucophaeus
ENSMODG00000012887	-	84	90.675	ENSMGAG00000013228	-	100	90.354	Meleagris_gallopavo
ENSMODG00000012887	-	100	95.399	ENSMAUG00000017178	Papola	100	95.399	Mesocricetus_auratus
ENSMODG00000012887	-	100	97.429	ENSMICG00000010347	PAPOLA	100	97.429	Microcebus_murinus
ENSMODG00000012887	-	100	95.399	ENSMOCG00000021670	Papola	100	95.399	Microtus_ochrogaster
ENSMODG00000012887	-	100	94.723	MGP_CAROLIEiJ_G0018093	Papola	100	94.723	Mus_caroli
ENSMODG00000012887	-	100	95.264	ENSMUSG00000021111	Papola	100	95.264	Mus_musculus
ENSMODG00000012887	-	100	95.264	MGP_PahariEiJ_G0029850	Papola	100	95.264	Mus_pahari
ENSMODG00000012887	-	100	95.129	MGP_SPRETEiJ_G0018943	Papola	100	95.129	Mus_spretus
ENSMODG00000012887	-	100	97.294	ENSMPUG00000003054	PAPOLA	100	97.294	Mustela_putorius_furo
ENSMODG00000012887	-	100	94.858	ENSMLUG00000010922	PAPOLA	100	94.858	Myotis_lucifugus
ENSMODG00000012887	-	100	95.264	ENSNGAG00000022172	Papola	100	95.264	Nannospalax_galili
ENSMODG00000012887	-	99	91.478	ENSNLEG00000000625	PAPOLA	100	91.478	Nomascus_leucogenys
ENSMODG00000012887	-	67	98.485	ENSMEUG00000007831	-	74	98.485	Notamacropus_eugenii
ENSMODG00000012887	-	97	90.707	ENSOPRG00000007625	PAPOLA	100	90.707	Ochotona_princeps
ENSMODG00000012887	-	64	54.202	ENSONIG00000001062	-	96	54.202	Oreochromis_niloticus
ENSMODG00000012887	-	99	91.723	ENSOANG00000013812	PAPOLA	99	91.723	Ornithorhynchus_anatinus
ENSMODG00000012887	-	99	94.166	ENSOCUG00000011531	PAPOLA	99	94.437	Oryctolagus_cuniculus
ENSMODG00000012887	-	100	97.568	ENSOGAG00000004611	PAPOLA	100	97.568	Otolemur_garnettii
ENSMODG00000012887	-	100	96.482	ENSOARG00000016579	-	100	96.482	Ovis_aries
ENSMODG00000012887	-	100	96.242	ENSPPAG00000030505	PAPOLA	100	96.242	Pan_paniscus
ENSMODG00000012887	-	100	97.564	ENSPPRG00000008616	PAPOLA	100	97.564	Panthera_pardus
ENSMODG00000012887	-	99	97.554	ENSPTIG00000018852	PAPOLA	99	97.554	Panthera_tigris_altaica
ENSMODG00000012887	-	100	96.242	ENSPTRG00000006704	PAPOLA	100	96.242	Pan_troglodytes
ENSMODG00000012887	-	100	96.376	ENSPANG00000025582	PAPOLA	98	98.696	Papio_anubis
ENSMODG00000012887	-	100	69.110	ENSPKIG00000014471	papola	100	69.935	Paramormyrops_kingsleyae
ENSMODG00000012887	-	100	94.189	ENSPSIG00000014157	PAPOLA	87	94.189	Pelodiscus_sinensis
ENSMODG00000012887	-	100	95.670	ENSPEMG00000000043	Papola	100	95.670	Peromyscus_maniculatus_bairdii
ENSMODG00000012887	-	100	99.323	ENSPCIG00000013234	PAPOLA	100	99.323	Phascolarctos_cinereus
ENSMODG00000012887	-	100	93.826	ENSPPYG00000006128	PAPOLA	100	93.826	Pongo_abelii
ENSMODG00000012887	-	89	90.396	ENSPCAG00000004199	PAPOLA	100	90.396	Procavia_capensis
ENSMODG00000012887	-	99	94.166	ENSPCOG00000022117	PAPOLA	99	94.166	Propithecus_coquereli
ENSMODG00000012887	-	100	95.805	ENSPVAG00000013925	PAPOLA	100	95.805	Pteropus_vampyrus
ENSMODG00000012887	-	100	70.430	ENSPNAG00000010467	papola	100	70.565	Pygocentrus_nattereri
ENSMODG00000012887	-	100	94.587	ENSRNOG00000004827	Papola	100	94.587	Rattus_norvegicus
ENSMODG00000012887	-	99	93.548	ENSRBIG00000038490	PAPOLA	97	97.740	Rhinopithecus_bieti
ENSMODG00000012887	-	100	96.376	ENSRROG00000025545	PAPOLA	100	96.376	Rhinopithecus_roxellana
ENSMODG00000012887	-	99	96.226	ENSSBOG00000024061	PAPOLA	100	96.097	Saimiri_boliviensis_boliviensis
ENSMODG00000012887	-	99	99.184	ENSSHAG00000015211	PAPOLA	99	99.184	Sarcophilus_harrisii
ENSMODG00000012887	-	100	71.410	ENSSFOG00015004431	papola	99	84.629	Scleropages_formosus
ENSMODG00000012887	-	65	58.299	ENSSDUG00000018247	-	72	58.058	Seriola_dumerili
ENSMODG00000012887	-	100	93.649	ENSSPUG00000005835	PAPOLA	100	93.649	Sphenodon_punctatus
ENSMODG00000012887	-	100	97.158	ENSSSCG00000002505	-	100	97.158	Sus_scrofa
ENSMODG00000012887	-	99	91.588	ENSTGUG00000012687	PAPOLA	99	90.897	Taeniopygia_guttata
ENSMODG00000012887	-	75	87.772	ENSTBEG00000000194	PAPOLA	75	87.772	Tupaia_belangeri
ENSMODG00000012887	-	80	90.909	ENSTTRG00000005717	PAPOLA	80	90.909	Tursiops_truncatus
ENSMODG00000012887	-	57	98.815	ENSUAMG00000025737	PAPOLA	98	98.815	Ursus_americanus
ENSMODG00000012887	-	99	96.739	ENSVPAG00000006464	PAPOLA	100	96.739	Vicugna_pacos
ENSMODG00000012887	-	100	97.158	ENSVVUG00000028340	PAPOLA	100	97.158	Vulpes_vulpes
ENSMODG00000012887	-	100	83.491	ENSXETG00000013949	papola	100	83.491	Xenopus_tropicalis