EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000013044 (Gene tree)
Gene ID: 100016341
Gene Symbol: CASC3
Alias: BTZ|MLN51
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 14088 bases
Position: chr2:197406338-197420425
Accession: 17040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000016323	Btz	PF09405.10	1.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000016624	CASC3-201	4997	-	ENSMODP00000016323	758 (aa)	-	F7G173

Gene Model

Click here to download ENSMODG00000013044's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03013	RNA transport	KEGG
mdo03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000013044's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000013044	CASC3	92	78.612	ENSG00000108349	CASC3	100	78.187	Homo_sapiens
ENSMODG00000013044	CASC3	92	80.453	ENSAMEG00000007764	CASC3	100	78.754	Ailuropoda_melanoleuca
ENSMODG00000013044	CASC3	72	54.969	ENSATEG00000017196	casc3	73	53.247	Anabas_testudineus
ENSMODG00000013044	CASC3	83	70.872	ENSACAG00000002674	CASC3	86	68.254	Anolis_carolinensis
ENSMODG00000013044	CASC3	91	70.827	ENSANAG00000034820	-	98	80.363	Aotus_nancymaae
ENSMODG00000013044	CASC3	60	91.509	ENSANAG00000031954	-	100	92.381	Aotus_nancymaae
ENSMODG00000013044	CASC3	65	55.949	ENSACLG00000016198	casc3	57	61.783	Astatotilapia_calliptera
ENSMODG00000013044	CASC3	92	80.284	ENSBTAG00000006250	CASC3	100	78.014	Bos_taurus
ENSMODG00000013044	CASC3	92	77.904	ENSCJAG00000016032	CASC3	100	77.620	Callithrix_jacchus
ENSMODG00000013044	CASC3	92	79.716	ENSCAFG00000016141	CASC3	100	78.723	Canis_familiaris
ENSMODG00000013044	CASC3	92	78.754	ENSCAFG00020018882	CASC3	99	84.731	Canis_lupus_dingo
ENSMODG00000013044	CASC3	92	79.291	ENSCHIG00000006338	CASC3	100	76.521	Capra_hircus
ENSMODG00000013044	CASC3	82	79.936	ENSTSYG00000002975	CASC3	89	80.800	Carlito_syrichta
ENSMODG00000013044	CASC3	81	77.184	ENSCAPG00000010514	CASC3	100	77.184	Cavia_aperea
ENSMODG00000013044	CASC3	92	76.857	ENSCPOG00000015139	CASC3	100	76.857	Cavia_porcellus
ENSMODG00000013044	CASC3	92	77.652	ENSCCAG00000033620	CASC3	100	77.935	Cebus_capucinus
ENSMODG00000013044	CASC3	92	78.895	ENSCATG00000033593	CASC3	100	79.320	Cercocebus_atys
ENSMODG00000013044	CASC3	92	77.557	ENSCLAG00000013730	CASC3	100	76.847	Chinchilla_lanigera
ENSMODG00000013044	CASC3	92	79.037	ENSCSAG00000002777	CASC3	100	78.470	Chlorocebus_sabaeus
ENSMODG00000013044	CASC3	92	71.509	ENSCPBG00000004750	CASC3	99	71.875	Chrysemys_picta_bellii
ENSMODG00000013044	CASC3	92	78.612	ENSCANG00000008814	CASC3	100	79.037	Colobus_angolensis_palliatus
ENSMODG00000013044	CASC3	92	78.977	ENSCGRG00001014706	Casc3	100	77.415	Cricetulus_griseus_chok1gshd
ENSMODG00000013044	CASC3	92	75.000	ENSCGRG00000001952	Casc3	96	79.680	Cricetulus_griseus_crigri
ENSMODG00000013044	CASC3	71	53.165	ENSCSEG00000010047	casc3	52	71.212	Cynoglossus_semilaevis
ENSMODG00000013044	CASC3	92	79.747	ENSDNOG00000017249	CASC3	97	78.169	Dasypus_novemcinctus
ENSMODG00000013044	CASC3	92	74.395	ENSETEG00000013720	CASC3	100	74.111	Echinops_telfairi
ENSMODG00000013044	CASC3	91	36.508	ENSEBUG00000010654	casc3	88	35.075	Eptatretus_burgeri
ENSMODG00000013044	CASC3	92	79.178	ENSEASG00005002909	CASC3	99	84.731	Equus_asinus_asinus
ENSMODG00000013044	CASC3	92	79.887	ENSECAG00000019947	CASC3	88	78.310	Equus_caballus
ENSMODG00000013044	CASC3	66	71.206	ENSEEUG00000014253	CASC3	100	69.455	Erinaceus_europaeus
ENSMODG00000013044	CASC3	76	57.276	ENSELUG00000015093	casc3	60	57.468	Esox_lucius
ENSMODG00000013044	CASC3	92	79.858	ENSFCAG00000014998	CASC3	100	78.156	Felis_catus
ENSMODG00000013044	CASC3	81	70.652	ENSFALG00000000412	CASC3	98	70.312	Ficedula_albicollis
ENSMODG00000013044	CASC3	86	75.342	ENSFDAG00000020696	CASC3	98	75.349	Fukomys_damarensis
ENSMODG00000013044	CASC3	66	56.158	ENSFHEG00000015793	casc3	62	58.152	Fundulus_heteroclitus
ENSMODG00000013044	CASC3	83	73.701	ENSGALG00000031813	CASC3	99	68.534	Gallus_gallus
ENSMODG00000013044	CASC3	82	72.214	ENSGAGG00000008432	CASC3	94	75.606	Gopherus_agassizii
ENSMODG00000013044	CASC3	92	78.754	ENSGGOG00000005067	CASC3	100	77.620	Gorilla_gorilla
ENSMODG00000013044	CASC3	67	55.949	ENSHBUG00000013155	casc3	57	61.783	Haplochromis_burtoni
ENSMODG00000013044	CASC3	92	76.312	ENSHGLG00000012117	CASC3	100	75.177	Heterocephalus_glaber_female
ENSMODG00000013044	CASC3	82	77.229	ENSHGLG00100002268	CASC3	99	76.960	Heterocephalus_glaber_male
ENSMODG00000013044	CASC3	92	78.723	ENSSTOG00000006374	CASC3	100	77.021	Ictidomys_tridecemlineatus
ENSMODG00000013044	CASC3	92	78.390	ENSJJAG00000023525	Casc3	100	78.107	Jaculus_jaculus
ENSMODG00000013044	CASC3	53	79.787	ENSKMAG00000019507	casc3	56	78.947	Kryptolebias_marmoratus
ENSMODG00000013044	CASC3	58	65.909	ENSLBEG00000005435	casc3	54	60.645	Labrus_bergylta
ENSMODG00000013044	CASC3	81	60.000	ENSLACG00000013200	CASC3	99	54.247	Latimeria_chalumnae
ENSMODG00000013044	CASC3	60	73.913	ENSLOCG00000013518	casc3	62	71.014	Lepisosteus_oculatus
ENSMODG00000013044	CASC3	92	78.440	ENSLAFG00000000606	CASC3	100	78.014	Loxodonta_africana
ENSMODG00000013044	CASC3	92	78.895	ENSMFAG00000041496	CASC3	100	84.731	Macaca_fascicularis
ENSMODG00000013044	CASC3	92	78.895	ENSMMUG00000045187	CASC3	100	79.320	Macaca_mulatta
ENSMODG00000013044	CASC3	82	79.968	ENSMLEG00000029049	CASC3	98	80.671	Mandrillus_leucophaeus
ENSMODG00000013044	CASC3	63	58.911	ENSMAMG00000005235	casc3	54	71.111	Mastacembelus_armatus
ENSMODG00000013044	CASC3	65	55.949	ENSMZEG00005003815	casc3	57	61.783	Maylandia_zebra
ENSMODG00000013044	CASC3	79	73.355	ENSMGAG00000013247	CASC3	99	71.405	Meleagris_gallopavo
ENSMODG00000013044	CASC3	66	78.088	ENSMAUG00000006023	Casc3	80	77.490	Mesocricetus_auratus
ENSMODG00000013044	CASC3	92	78.298	ENSMICG00000003321	CASC3	100	78.156	Microcebus_murinus
ENSMODG00000013044	CASC3	92	78.409	ENSMOCG00000013644	Casc3	100	75.852	Microtus_ochrogaster
ENSMODG00000013044	CASC3	69	52.174	ENSMALG00000019771	casc3	83	45.423	Monopterus_albus
ENSMODG00000013044	CASC3	92	79.060	MGP_CAROLIEiJ_G0017099	Casc3	100	77.066	Mus_caroli
ENSMODG00000013044	CASC3	92	78.490	ENSMUSG00000078676	Casc3	100	76.496	Mus_musculus
ENSMODG00000013044	CASC3	92	78.632	MGP_SPRETEiJ_G0017943	Casc3	100	76.638	Mus_spretus
ENSMODG00000013044	CASC3	92	80.142	ENSMPUG00000014903	CASC3	100	78.440	Mustela_putorius_furo
ENSMODG00000013044	CASC3	92	78.187	ENSMLUG00000010520	CASC3	100	77.195	Myotis_lucifugus
ENSMODG00000013044	CASC3	92	78.632	ENSNGAG00000023121	Casc3	100	77.493	Nannospalax_galili
ENSMODG00000013044	CASC3	92	77.620	ENSNLEG00000001598	CASC3	100	77.620	Nomascus_leucogenys
ENSMODG00000013044	CASC3	66	72.603	ENSOPRG00000007240	-	75	71.429	Ochotona_princeps
ENSMODG00000013044	CASC3	92	75.847	ENSODEG00000017858	CASC3	100	75.565	Octodon_degus
ENSMODG00000013044	CASC3	67	55.949	ENSONIG00000009337	casc3	89	46.677	Oreochromis_niloticus
ENSMODG00000013044	CASC3	73	50.000	ENSOANG00000003499	-	96	50.785	Ornithorhynchus_anatinus
ENSMODG00000013044	CASC3	92	79.830	ENSOCUG00000002954	CASC3	100	77.841	Oryctolagus_cuniculus
ENSMODG00000013044	CASC3	91	78.571	ENSOGAG00000034486	CASC3	98	77.571	Otolemur_garnettii
ENSMODG00000013044	CASC3	92	80.284	ENSOARG00000013239	CASC3	100	78.156	Ovis_aries
ENSMODG00000013044	CASC3	92	78.612	ENSPPAG00000035069	CASC3	100	78.187	Pan_paniscus
ENSMODG00000013044	CASC3	92	79.716	ENSPPRG00000023670	CASC3	100	78.014	Panthera_pardus
ENSMODG00000013044	CASC3	84	80.438	ENSPTIG00000010891	CASC3	91	79.812	Panthera_tigris_altaica
ENSMODG00000013044	CASC3	92	78.612	ENSPANG00000021708	CASC3	100	79.037	Papio_anubis
ENSMODG00000013044	CASC3	91	48.148	ENSPKIG00000023186	casc3	80	48.352	Paramormyrops_kingsleyae
ENSMODG00000013044	CASC3	92	79.801	ENSPEMG00000009774	Casc3	100	77.952	Peromyscus_maniculatus_bairdii
ENSMODG00000013044	CASC3	92	89.714	ENSPCIG00000025678	CASC3	100	89.714	Phascolarctos_cinereus
ENSMODG00000013044	CASC3	82	47.859	ENSPFOG00000017632	casc3	57	86.667	Poecilia_formosa
ENSMODG00000013044	CASC3	64	55.769	ENSPLAG00000005268	casc3	54	73.282	Poecilia_latipinna
ENSMODG00000013044	CASC3	58	45.067	ENSPMEG00000010299	casc3	73	44.371	Poecilia_mexicana
ENSMODG00000013044	CASC3	56	82.105	ENSPREG00000011856	casc3	57	81.250	Poecilia_reticulata
ENSMODG00000013044	CASC3	92	78.835	ENSPPYG00000008467	CASC3	100	79.261	Pongo_abelii
ENSMODG00000013044	CASC3	92	77.730	ENSPCOG00000008183	CASC3	100	78.014	Propithecus_coquereli
ENSMODG00000013044	CASC3	92	79.574	ENSPVAG00000008556	CASC3	100	78.440	Pteropus_vampyrus
ENSMODG00000013044	CASC3	67	55.949	ENSPNYG00000011962	casc3	57	61.783	Pundamilia_nyererei
ENSMODG00000013044	CASC3	83	83.784	ENSRNOG00000009716	Casc3	99	82.282	Rattus_norvegicus
ENSMODG00000013044	CASC3	92	78.903	ENSRBIG00000033289	CASC3	100	77.904	Rhinopithecus_bieti
ENSMODG00000013044	CASC3	92	78.895	ENSRROG00000022337	CASC3	100	79.320	Rhinopithecus_roxellana
ENSMODG00000013044	CASC3	81	78.871	ENSSBOG00000031406	CASC3	98	79.355	Saimiri_boliviensis_boliviensis
ENSMODG00000013044	CASC3	82	89.331	ENSSHAG00000013338	CASC3	99	88.800	Sarcophilus_harrisii
ENSMODG00000013044	CASC3	90	46.632	ENSSFOG00015002645	casc3	81	50.000	Scleropages_formosus
ENSMODG00000013044	CASC3	56	77.586	ENSSMAG00000016096	casc3	55	64.667	Scophthalmus_maximus
ENSMODG00000013044	CASC3	72	51.095	ENSSDUG00000016893	casc3	70	50.000	Seriola_dumerili
ENSMODG00000013044	CASC3	67	91.398	ENSSARG00000010378	CASC3	83	93.182	Sorex_araneus
ENSMODG00000013044	CASC3	66	56.634	ENSSPAG00000023008	casc3	55	64.626	Stegastes_partitus
ENSMODG00000013044	CASC3	82	80.096	ENSSSCG00000017477	CASC3	98	80.320	Sus_scrofa
ENSMODG00000013044	CASC3	69	71.238	ENSTGUG00000002300	CASC3	99	71.238	Taeniopygia_guttata
ENSMODG00000013044	CASC3	63	59.596	ENSTRUG00000000673	casc3	72	52.787	Takifugu_rubripes
ENSMODG00000013044	CASC3	60	89.151	ENSTBEG00000017459	CASC3	67	89.151	Tupaia_belangeri
ENSMODG00000013044	CASC3	68	93.069	ENSTTRG00000016896	CASC3	83	94.318	Tursiops_truncatus
ENSMODG00000013044	CASC3	92	79.037	ENSUAMG00000015116	CASC3	99	83.832	Ursus_americanus
ENSMODG00000013044	CASC3	82	80.732	ENSUMAG00000017697	CASC3	98	83.832	Ursus_maritimus
ENSMODG00000013044	CASC3	69	96.639	ENSVPAG00000000799	CASC3	75	96.639	Vicugna_pacos
ENSMODG00000013044	CASC3	92	79.574	ENSVVUG00000000997	CASC3	100	78.582	Vulpes_vulpes
ENSMODG00000013044	CASC3	82	60.348	ENSXETG00000024395	casc3	98	57.550	Xenopus_tropicalis
ENSMODG00000013044	CASC3	56	77.586	ENSXMAG00000013937	casc3	53	72.308	Xiphophorus_maculatus