EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000013156 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 1908 bases
Position: chrX:29465795-29467702
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000027586	PABP	PF00658.18	5.6e-31	1	1
ENSMODP00000027586	RRM_5	PF13893.6	5.5e-09	1	2
ENSMODP00000027586	RRM_5	PF13893.6	5.5e-09	2	2
ENSMODP00000027586	RRM_1	PF00076.22	6e-85	1	4
ENSMODP00000027586	RRM_1	PF00076.22	6e-85	2	4
ENSMODP00000027586	RRM_1	PF00076.22	6e-85	3	4
ENSMODP00000027586	RRM_1	PF00076.22	6e-85	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000016766	-	1908	-	ENSMODP00000027586	635 (aa)	-	F6PHL0

Gene Model

Click here to download ENSMODG00000013156's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000013156's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000013156	-	63	30.579	ENSMODG00000001300	-	66	30.579
ENSMODG00000013156	-	99	75.510	ENSMODG00000006222	PABPC1	99	75.196
ENSMODG00000013156	-	57	38.798	ENSMODG00000018767	SF3B4	68	38.798
ENSMODG00000013156	-	93	61.252	ENSMODG00000016198	PABPC1L	98	61.513
ENSMODG00000013156	-	98	73.726	ENSMODG00000017105	-	98	73.726
ENSMODG00000013156	-	58	62.429	ENSMODG00000018051	-	91	62.429
ENSMODG00000013156	-	59	30.159	ENSMODG00000003850	-	92	30.159
ENSMODG00000013156	-	98	68.266	ENSMODG00000017657	-	99	67.588
ENSMODG00000013156	-	98	65.545	ENSMODG00000015024	-	97	65.385
ENSMODG00000013156	-	59	35.802	ENSMODG00000005041	ELAVL1	78	30.323
ENSMODG00000013156	-	60	30.435	ENSMODG00000003936	ELAVL2	84	30.625
ENSMODG00000013156	-	98	73.868	ENSMODG00000012040	-	98	73.601

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000013156	-	58	73.980	ENSG00000184388	PABPC1L2B	98	73.980	Homo_sapiens
ENSMODG00000013156	-	58	73.980	ENSG00000186288	PABPC1L2A	98	73.980	Homo_sapiens
ENSMODG00000013156	-	98	73.323	ENSAPOG00000015105	pabpc1a	98	73.163	Acanthochromis_polyacanthus
ENSMODG00000013156	-	98	73.726	ENSAPOG00000017776	pabpc1b	98	73.408	Acanthochromis_polyacanthus
ENSMODG00000013156	-	58	73.980	ENSAMEG00000019441	-	98	73.980	Ailuropoda_melanoleuca
ENSMODG00000013156	-	98	72.611	ENSACIG00000018366	pabpc1b	98	72.293	Amphilophus_citrinellus
ENSMODG00000013156	-	98	72.843	ENSACIG00000004685	pabpc1a	98	72.552	Amphilophus_citrinellus
ENSMODG00000013156	-	98	73.163	ENSAOCG00000011656	pabpc1a	98	73.003	Amphiprion_ocellaris
ENSMODG00000013156	-	98	73.726	ENSAOCG00000019839	pabpc1b	98	73.408	Amphiprion_ocellaris
ENSMODG00000013156	-	98	73.726	ENSAPEG00000010435	pabpc1b	98	73.408	Amphiprion_percula
ENSMODG00000013156	-	98	73.163	ENSAPEG00000006963	pabpc1a	98	73.003	Amphiprion_percula
ENSMODG00000013156	-	98	73.609	ENSATEG00000012917	pabpc1b	98	73.089	Anabas_testudineus
ENSMODG00000013156	-	98	73.323	ENSATEG00000024852	pabpc1a	98	72.873	Anabas_testudineus
ENSMODG00000013156	-	58	73.980	ENSANAG00000019429	-	98	73.980	Aotus_nancymaae
ENSMODG00000013156	-	58	73.980	ENSANAG00000019431	-	98	73.980	Aotus_nancymaae
ENSMODG00000013156	-	98	73.248	ENSACLG00000014335	pabpc1b	98	73.089	Astatotilapia_calliptera
ENSMODG00000013156	-	98	79.335	ENSACLG00000009399	pabpc1a	98	81.053	Astatotilapia_calliptera
ENSMODG00000013156	-	98	74.045	ENSAMXG00000008599	pabpc1b	98	73.885	Astyanax_mexicanus
ENSMODG00000013156	-	58	73.737	ENSBTAG00000052491	-	97	73.737	Bos_taurus
ENSMODG00000013156	-	59	72.906	ENSBTAG00000050902	-	97	72.906	Bos_taurus
ENSMODG00000013156	-	58	73.980	ENSCJAG00000041326	-	98	73.980	Callithrix_jacchus
ENSMODG00000013156	-	58	73.737	ENSCAFG00020002052	-	95	73.737	Canis_lupus_dingo
ENSMODG00000013156	-	58	73.980	ENSCHIG00000011138	-	98	73.980	Capra_hircus
ENSMODG00000013156	-	58	73.980	ENSCHIG00000006283	-	98	73.980	Capra_hircus
ENSMODG00000013156	-	58	73.980	ENSTSYG00000001775	-	98	73.980	Carlito_syrichta
ENSMODG00000013156	-	58	73.980	ENSCPOG00000009525	-	98	73.980	Cavia_porcellus
ENSMODG00000013156	-	58	73.980	ENSCCAG00000031524	-	98	73.980	Cebus_capucinus
ENSMODG00000013156	-	58	73.980	ENSCATG00000043125	-	98	73.980	Cercocebus_atys
ENSMODG00000013156	-	58	73.980	ENSCATG00000042826	-	98	73.980	Cercocebus_atys
ENSMODG00000013156	-	58	71.939	ENSCLAG00000017409	-	98	71.939	Chinchilla_lanigera
ENSMODG00000013156	-	58	71.939	ENSCLAG00000017412	-	98	71.939	Chinchilla_lanigera
ENSMODG00000013156	-	58	73.980	ENSCSAG00000000102	-	98	73.980	Chlorocebus_sabaeus
ENSMODG00000013156	-	57	74.176	ENSCGRG00001023387	-	96	71.282	Cricetulus_griseus_chok1gshd
ENSMODG00000013156	-	98	73.194	ENSCSEG00000013324	pabpc1a	99	72.843	Cynoglossus_semilaevis
ENSMODG00000013156	-	99	72.913	ENSCSEG00000015241	-	99	72.414	Cynoglossus_semilaevis
ENSMODG00000013156	-	99	70.958	ENSCVAG00000005489	pabpc1b	99	70.801	Cyprinodon_variegatus
ENSMODG00000013156	-	98	72.814	ENSCVAG00000021872	pabpc1a	98	72.973	Cyprinodon_variegatus
ENSMODG00000013156	-	98	73.885	ENSDARG00000021140	pabpc1b	99	84.672	Danio_rerio
ENSMODG00000013156	-	98	73.525	ENSDARG00000017219	pabpc1a	98	73.492	Danio_rerio
ENSMODG00000013156	-	58	75.132	ENSDNOG00000030926	-	98	72.959	Dasypus_novemcinctus
ENSMODG00000013156	-	58	72.959	ENSDORG00000011362	-	98	72.959	Dipodomys_ordii
ENSMODG00000013156	-	58	73.737	ENSEASG00005010399	-	94	73.737	Equus_asinus_asinus
ENSMODG00000013156	-	58	73.737	ENSECAG00000002620	-	94	73.737	Equus_caballus
ENSMODG00000013156	-	58	70.408	ENSEEUG00000008203	-	98	70.408	Erinaceus_europaeus
ENSMODG00000013156	-	98	73.600	ENSELUG00000003614	pabpc1a	98	73.525	Esox_lucius
ENSMODG00000013156	-	98	73.968	ENSELUG00000015062	-	98	73.651	Esox_lucius
ENSMODG00000013156	-	57	54.955	ENSELUG00000005389	-	93	54.955	Esox_lucius
ENSMODG00000013156	-	58	73.980	ENSFCAG00000039701	-	98	73.980	Felis_catus
ENSMODG00000013156	-	58	73.980	ENSFDAG00000005484	-	98	73.980	Fukomys_damarensis
ENSMODG00000013156	-	98	72.524	ENSFHEG00000018979	pabpc1a	98	72.496	Fundulus_heteroclitus
ENSMODG00000013156	-	98	73.280	ENSFHEG00000008186	pabpc1b	98	73.089	Fundulus_heteroclitus
ENSMODG00000013156	-	98	71.384	ENSGMOG00000013448	pabpc1a	98	71.226	Gadus_morhua
ENSMODG00000013156	-	98	69.352	ENSGMOG00000002448	-	98	69.036	Gadus_morhua
ENSMODG00000013156	-	98	72.496	ENSGAFG00000019750	pabpc1a	98	72.337	Gambusia_affinis
ENSMODG00000013156	-	98	73.280	ENSGAFG00000010193	pabpc1b	98	72.441	Gambusia_affinis
ENSMODG00000013156	-	98	72.540	ENSGACG00000003771	pabpc1b	98	72.540	Gasterosteus_aculeatus
ENSMODG00000013156	-	98	73.248	ENSGACG00000003572	pabpc1a	98	73.003	Gasterosteus_aculeatus
ENSMODG00000013156	-	58	73.980	ENSGGOG00000038606	-	98	73.980	Gorilla_gorilla
ENSMODG00000013156	-	58	73.980	ENSGGOG00000043933	-	98	73.980	Gorilla_gorilla
ENSMODG00000013156	-	98	79.335	ENSHBUG00000020487	pabpc1a	98	81.053	Haplochromis_burtoni
ENSMODG00000013156	-	98	73.248	ENSHBUG00000002075	pabpc1b	98	73.089	Haplochromis_burtoni
ENSMODG00000013156	-	58	72.959	ENSHGLG00000019668	-	98	72.959	Heterocephalus_glaber_female
ENSMODG00000013156	-	58	72.959	ENSHGLG00000019762	-	98	72.959	Heterocephalus_glaber_female
ENSMODG00000013156	-	58	72.959	ENSHGLG00100020854	-	98	72.959	Heterocephalus_glaber_male
ENSMODG00000013156	-	97	63.403	ENSHCOG00000003175	pabpc1b	99	75.269	Hippocampus_comes
ENSMODG00000013156	-	98	72.713	ENSHCOG00000013502	pabpc1a	98	72.392	Hippocampus_comes
ENSMODG00000013156	-	62	59.446	ENSIPUG00000021244	-	54	61.155	Ictalurus_punctatus
ENSMODG00000013156	-	99	72.814	ENSIPUG00000008848	pabpc1a	99	72.524	Ictalurus_punctatus
ENSMODG00000013156	-	58	53.333	ENSIPUG00000018724	-	66	53.333	Ictalurus_punctatus
ENSMODG00000013156	-	99	70.860	ENSIPUG00000010791	-	99	70.860	Ictalurus_punctatus
ENSMODG00000013156	-	58	73.469	ENSSTOG00000026028	-	98	73.469	Ictidomys_tridecemlineatus
ENSMODG00000013156	-	58	73.469	ENSSTOG00000022096	-	98	73.469	Ictidomys_tridecemlineatus
ENSMODG00000013156	-	58	72.449	ENSJJAG00000007037	-	98	72.449	Jaculus_jaculus
ENSMODG00000013156	-	98	73.642	ENSKMAG00000000605	pabpc1a	98	73.482	Kryptolebias_marmoratus
ENSMODG00000013156	-	99	71.994	ENSKMAG00000008049	pabpc1b	99	71.994	Kryptolebias_marmoratus
ENSMODG00000013156	-	98	74.045	ENSLBEG00000026845	pabpc1b	98	73.558	Labrus_bergylta
ENSMODG00000013156	-	98	72.930	ENSLBEG00000024002	-	98	72.552	Labrus_bergylta
ENSMODG00000013156	-	57	72.821	ENSLAFG00000023096	-	98	72.821	Loxodonta_africana
ENSMODG00000013156	-	58	73.604	ENSMFAG00000028878	-	98	73.604	Macaca_fascicularis
ENSMODG00000013156	-	58	73.980	ENSMMUG00000009740	-	98	73.980	Macaca_mulatta
ENSMODG00000013156	-	58	73.980	ENSMMUG00000037681	-	98	73.980	Macaca_mulatta
ENSMODG00000013156	-	58	73.980	ENSMMUG00000039929	-	98	73.980	Macaca_mulatta
ENSMODG00000013156	-	58	73.980	ENSMNEG00000037732	-	98	73.980	Macaca_nemestrina
ENSMODG00000013156	-	58	73.980	ENSMLEG00000027495	-	98	73.980	Mandrillus_leucophaeus
ENSMODG00000013156	-	98	73.726	ENSMAMG00000014610	pabpc1b	98	73.567	Mastacembelus_armatus
ENSMODG00000013156	-	98	78.622	ENSMAMG00000004502	-	98	78.622	Mastacembelus_armatus
ENSMODG00000013156	-	98	73.248	ENSMZEG00005026745	pabpc1b	98	73.089	Maylandia_zebra
ENSMODG00000013156	-	98	79.335	ENSMZEG00005025416	pabpc1a	98	81.053	Maylandia_zebra
ENSMODG00000013156	-	58	73.980	ENSMICG00000047642	-	98	73.980	Microcebus_murinus
ENSMODG00000013156	-	98	71.474	ENSMMOG00000018009	pabpc1b	98	71.635	Mola_mola
ENSMODG00000013156	-	98	78.622	ENSMMOG00000018044	pabpc1a	98	78.622	Mola_mola
ENSMODG00000013156	-	98	70.947	ENSMALG00000006066	pabpc1b	98	70.947	Monopterus_albus
ENSMODG00000013156	-	98	72.843	ENSMALG00000013020	-	98	72.392	Monopterus_albus
ENSMODG00000013156	-	58	75.956	ENSNGAG00000012688	-	98	72.449	Nannospalax_galili
ENSMODG00000013156	-	98	73.408	ENSNBRG00000013737	pabpc1b	98	73.248	Neolamprologus_brichardi
ENSMODG00000013156	-	98	79.335	ENSNBRG00000003068	-	98	81.053	Neolamprologus_brichardi
ENSMODG00000013156	-	58	73.980	ENSNLEG00000018128	-	98	73.980	Nomascus_leucogenys
ENSMODG00000013156	-	58	72.449	ENSODEG00000018540	-	98	72.449	Octodon_degus
ENSMODG00000013156	-	98	73.408	ENSONIG00000002717	pabpc1b	98	73.248	Oreochromis_niloticus
ENSMODG00000013156	-	98	73.003	ENSONIG00000006871	-	98	72.552	Oreochromis_niloticus
ENSMODG00000013156	-	58	73.980	ENSOCUG00000002565	-	98	73.980	Oryctolagus_cuniculus
ENSMODG00000013156	-	98	72.364	ENSORLG00000003008	-	98	72.276	Oryzias_latipes
ENSMODG00000013156	-	98	79.236	ENSORLG00000002691	pabpc1a	94	87.302	Oryzias_latipes
ENSMODG00000013156	-	98	72.684	ENSORLG00020022398	pabpc1a	98	72.524	Oryzias_latipes_hni
ENSMODG00000013156	-	98	72.160	ENSORLG00020022259	-	99	71.203	Oryzias_latipes_hni
ENSMODG00000013156	-	98	72.684	ENSORLG00015013633	pabpc1	98	72.524	Oryzias_latipes_hsok
ENSMODG00000013156	-	98	72.480	ENSORLG00015010932	-	99	71.519	Oryzias_latipes_hsok
ENSMODG00000013156	-	98	75.118	ENSOMEG00000013627	pabpc1b	98	75.789	Oryzias_melastigma
ENSMODG00000013156	-	98	72.843	ENSOMEG00000020219	pabpc1a	98	72.843	Oryzias_melastigma
ENSMODG00000013156	-	58	73.980	ENSOGAG00000029513	-	98	73.980	Otolemur_garnettii
ENSMODG00000013156	-	58	73.980	ENSOGAG00000026047	-	98	73.980	Otolemur_garnettii
ENSMODG00000013156	-	58	73.980	ENSOARG00000005943	-	98	73.980	Ovis_aries
ENSMODG00000013156	-	58	73.980	ENSPPAG00000012920	-	98	73.980	Pan_paniscus
ENSMODG00000013156	-	58	73.980	ENSPPRG00000011809	-	98	73.980	Panthera_pardus
ENSMODG00000013156	-	58	73.980	ENSPPRG00000011804	-	98	73.980	Panthera_pardus
ENSMODG00000013156	-	58	73.980	ENSPTRG00000028252	-	98	73.980	Pan_troglodytes
ENSMODG00000013156	-	58	73.980	ENSPANG00000011549	-	98	73.980	Papio_anubis
ENSMODG00000013156	-	98	74.722	ENSPKIG00000005676	pabpc1b	98	74.204	Paramormyrops_kingsleyae
ENSMODG00000013156	-	69	78.005	ENSPMGG00000023134	-	96	78.005	Periophthalmus_magnuspinnatus
ENSMODG00000013156	-	74	74.894	ENSPMGG00000022487	pabpc1a	91	78.636	Periophthalmus_magnuspinnatus
ENSMODG00000013156	-	100	72.598	ENSPCIG00000016995	-	55	72.283	Phascolarctos_cinereus
ENSMODG00000013156	-	98	72.414	ENSPFOG00000010815	pabpc1a	98	72.414	Poecilia_formosa
ENSMODG00000013156	-	98	73.280	ENSPFOG00000005917	pabpc1b	98	73.089	Poecilia_formosa
ENSMODG00000013156	-	98	72.843	ENSPLAG00000004114	pabpc1a	98	72.973	Poecilia_latipinna
ENSMODG00000013156	-	98	73.440	ENSPLAG00000001388	pabpc1b	98	73.248	Poecilia_latipinna
ENSMODG00000013156	-	98	73.280	ENSPMEG00000014399	pabpc1b	98	73.089	Poecilia_mexicana
ENSMODG00000013156	-	98	72.843	ENSPMEG00000001334	pabpc1a	98	72.973	Poecilia_mexicana
ENSMODG00000013156	-	98	73.440	ENSPREG00000010911	pabpc1b	98	73.248	Poecilia_reticulata
ENSMODG00000013156	-	98	79.097	ENSPREG00000019595	pabpc1a	98	83.516	Poecilia_reticulata
ENSMODG00000013156	-	58	73.980	ENSPPYG00000020468	-	98	73.980	Pongo_abelii
ENSMODG00000013156	-	58	73.980	ENSPCAG00000005308	-	98	73.980	Procavia_capensis
ENSMODG00000013156	-	58	73.469	ENSPCOG00000026349	-	98	73.469	Propithecus_coquereli
ENSMODG00000013156	-	58	74.359	ENSPVAG00000016117	-	98	74.359	Pteropus_vampyrus
ENSMODG00000013156	-	98	73.248	ENSPNYG00000012578	pabpc1b	98	73.089	Pundamilia_nyererei
ENSMODG00000013156	-	98	73.194	ENSPNYG00000005192	pabpc1a	98	72.873	Pundamilia_nyererei
ENSMODG00000013156	-	98	73.450	ENSPNAG00000024626	pabpc1b	98	73.132	Pygocentrus_nattereri
ENSMODG00000013156	-	98	80.227	ENSPNAG00000028408	pabpc1a	93	83.516	Pygocentrus_nattereri
ENSMODG00000013156	-	58	73.980	ENSRBIG00000027173	-	98	73.980	Rhinopithecus_bieti
ENSMODG00000013156	-	98	78.322	ENSRBIG00000028738	-	93	78.322	Rhinopithecus_bieti
ENSMODG00000013156	-	58	73.980	ENSRROG00000017404	-	98	73.980	Rhinopithecus_roxellana
ENSMODG00000013156	-	98	64.620	ENSSHAG00000000511	-	100	64.620	Sarcophilus_harrisii
ENSMODG00000013156	-	58	72.254	ENSSFOG00015019668	-	68	72.254	Scleropages_formosus
ENSMODG00000013156	-	99	72.484	ENSSFOG00015006662	pabpc1a	99	71.987	Scleropages_formosus
ENSMODG00000013156	-	98	74.482	ENSSFOG00015002752	-	98	74.045	Scleropages_formosus
ENSMODG00000013156	-	98	72.843	ENSSMAG00000010803	pabpc1a	98	72.552	Scophthalmus_maximus
ENSMODG00000013156	-	98	73.248	ENSSMAG00000006869	pabpc1b	98	73.089	Scophthalmus_maximus
ENSMODG00000013156	-	98	73.806	ENSSDUG00000011965	pabpc1b	97	73.798	Seriola_dumerili
ENSMODG00000013156	-	98	73.163	ENSSDUG00000006675	pabpc1a	98	72.713	Seriola_dumerili
ENSMODG00000013156	-	98	73.163	ENSSLDG00000011661	pabpc1a	98	72.713	Seriola_lalandi_dorsalis
ENSMODG00000013156	-	98	73.460	ENSSLDG00000014156	pabpc1b	98	73.291	Seriola_lalandi_dorsalis
ENSMODG00000013156	-	98	74.204	ENSSPAG00000019265	pabpc1b	98	74.199	Stegastes_partitus
ENSMODG00000013156	-	98	73.003	ENSSPAG00000014453	-	98	72.843	Stegastes_partitus
ENSMODG00000013156	-	58	73.980	ENSSSCG00000032167	-	98	73.980	Sus_scrofa
ENSMODG00000013156	-	58	73.980	ENSSSCG00000036336	-	98	73.980	Sus_scrofa
ENSMODG00000013156	-	98	72.178	ENSTRUG00000003767	-	98	72.019	Takifugu_rubripes
ENSMODG00000013156	-	98	72.568	ENSTRUG00000011577	-	98	72.089	Takifugu_rubripes
ENSMODG00000013156	-	98	72.655	ENSTNIG00000009153	pabpc1b	98	72.152	Tetraodon_nigroviridis
ENSMODG00000013156	-	98	71.248	ENSTNIG00000013307	pabpc1a	98	70.616	Tetraodon_nigroviridis
ENSMODG00000013156	-	58	73.980	ENSTTRG00000013181	-	98	73.980	Tursiops_truncatus
ENSMODG00000013156	-	58	73.980	ENSUAMG00000008089	-	98	73.980	Ursus_americanus
ENSMODG00000013156	-	97	50.484	ENSUMAG00000023926	-	97	60.049	Ursus_maritimus
ENSMODG00000013156	-	58	73.980	ENSUMAG00000003364	-	98	73.980	Ursus_maritimus
ENSMODG00000013156	-	59	72.277	ENSVVUG00000015892	-	98	72.277	Vulpes_vulpes
ENSMODG00000013156	-	97	42.105	ENSXETG00000015439	-	97	41.876	Xenopus_tropicalis
ENSMODG00000013156	-	98	71.108	ENSXCOG00000017066	pabpc1a	98	71.314	Xiphophorus_couchianus
ENSMODG00000013156	-	98	71.750	ENSXCOG00000019901	pabpc1b	98	71.108	Xiphophorus_couchianus
ENSMODG00000013156	-	98	72.524	ENSXMAG00000002555	pabpc1a	98	72.204	Xiphophorus_maculatus
ENSMODG00000013156	-	98	73.280	ENSXMAG00000003753	pabpc1b	90	83.740	Xiphophorus_maculatus