EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000013187 (Gene tree)
Gene ID: 100021449
Gene Symbol: -
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Minus strand
Length: 150992 bases
Position: chrX:30863583-31014574
Accession: 100021449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000016503	ResIII	PF04851.15	2.2e-11	1	1
ENSMODP00000016503	DEAD	PF00270.29	6.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000016807	-	5051	-	ENSMODP00000016503	1038 (aa)	XP_007507218	F7FAD4

Gene Model

Click here to download ENSMODG00000013187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000013187's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000013187	-	55	44.133	ENSMODG00000018717	CHD1L	62	44.406
ENSMODG00000013187	-	99	84.369	ENSMODG00000000391	SMARCA5	93	87.245

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000013187	-	99	89.545	ENSG00000102038	SMARCA1	98	89.555	Homo_sapiens
ENSMODG00000013187	-	94	84.205	ENSAPOG00000016035	smarca5	98	84.447	Acanthochromis_polyacanthus
ENSMODG00000013187	-	99	88.230	ENSAMEG00000015218	SMARCA1	98	88.095	Ailuropoda_melanoleuca
ENSMODG00000013187	-	87	84.812	ENSACIG00000016982	smarca5	99	84.916	Amphilophus_citrinellus
ENSMODG00000013187	-	94	84.205	ENSAOCG00000015578	smarca5	95	83.792	Amphiprion_ocellaris
ENSMODG00000013187	-	94	84.205	ENSAPEG00000011117	smarca5	99	84.770	Amphiprion_percula
ENSMODG00000013187	-	94	84.103	ENSATEG00000012894	smarca5	93	85.322	Anabas_testudineus
ENSMODG00000013187	-	95	95.621	ENSAPLG00000013149	SMARCA1	100	95.621	Anas_platyrhynchos
ENSMODG00000013187	-	99	93.574	ENSACAG00000011376	SMARCA1	97	93.574	Anolis_carolinensis
ENSMODG00000013187	-	99	84.705	ENSANAG00000023098	SMARCA1	98	84.720	Aotus_nancymaae
ENSMODG00000013187	-	94	84.615	ENSACLG00000025356	smarca5	99	81.712	Astatotilapia_calliptera
ENSMODG00000013187	-	99	81.818	ENSAMXG00000005709	smarca5	98	81.298	Astyanax_mexicanus
ENSMODG00000013187	-	89	91.505	ENSAMXG00000011227	smarca1	97	93.588	Astyanax_mexicanus
ENSMODG00000013187	-	96	90.973	ENSBTAG00000002292	SMARCA1	98	88.012	Bos_taurus
ENSMODG00000013187	-	95	62.800	WBGene00002169	isw-1	97	62.941	Caenorhabditis_elegans
ENSMODG00000013187	-	99	89.448	ENSCJAG00000002868	SMARCA1	98	89.458	Callithrix_jacchus
ENSMODG00000013187	-	99	80.000	ENSCAFG00000018673	SMARCA1	99	83.294	Canis_familiaris
ENSMODG00000013187	-	99	89.642	ENSCAFG00020001751	SMARCA1	98	89.749	Canis_lupus_dingo
ENSMODG00000013187	-	99	88.803	ENSCHIG00000009837	SMARCA1	98	88.996	Capra_hircus
ENSMODG00000013187	-	99	88.707	ENSTSYG00000004240	SMARCA1	98	90.854	Carlito_syrichta
ENSMODG00000013187	-	96	90.647	ENSCPOG00000013601	SMARCA1	98	88.803	Cavia_porcellus
ENSMODG00000013187	-	99	86.641	ENSCCAG00000030817	SMARCA1	98	86.654	Cebus_capucinus
ENSMODG00000013187	-	99	88.517	ENSCATG00000015921	SMARCA1	97	89.635	Cercocebus_atys
ENSMODG00000013187	-	99	89.255	ENSCLAG00000002171	SMARCA1	98	89.448	Chinchilla_lanigera
ENSMODG00000013187	-	99	89.545	ENSCSAG00000008460	SMARCA1	98	89.555	Chlorocebus_sabaeus
ENSMODG00000013187	-	98	95.010	ENSCPBG00000001146	SMARCA1	97	95.010	Chrysemys_picta_bellii
ENSMODG00000013187	-	98	72.478	ENSCING00000004110	swi/snf	99	72.282	Ciona_intestinalis
ENSMODG00000013187	-	95	73.891	ENSCSAVG00000004620	-	100	74.944	Ciona_savignyi
ENSMODG00000013187	-	99	89.448	ENSCANG00000007183	SMARCA1	98	89.458	Colobus_angolensis_palliatus
ENSMODG00000013187	-	99	88.008	ENSCGRG00001010776	Smarca1	98	88.008	Cricetulus_griseus_chok1gshd
ENSMODG00000013187	-	94	89.442	ENSCGRG00000015301	Smarca1	97	90.402	Cricetulus_griseus_crigri
ENSMODG00000013187	-	94	84.308	ENSCSEG00000000328	smarca5	97	81.962	Cynoglossus_semilaevis
ENSMODG00000013187	-	94	83.795	ENSCVAG00000008668	smarca5	99	84.434	Cyprinodon_variegatus
ENSMODG00000013187	-	99	80.347	ENSDARG00000052348	smarca5	100	80.212	Danio_rerio
ENSMODG00000013187	-	95	88.276	ENSDARG00000012776	smarca1	99	86.948	Danio_rerio
ENSMODG00000013187	-	97	89.219	ENSDNOG00000004315	SMARCA1	97	89.505	Dasypus_novemcinctus
ENSMODG00000013187	-	97	89.021	ENSDORG00000009270	Smarca1	97	89.021	Dipodomys_ordii
ENSMODG00000013187	-	91	75.105	FBgn0011604	Iswi	98	72.898	Drosophila_melanogaster
ENSMODG00000013187	-	79	88.393	ENSETEG00000017426	SMARCA1	85	88.393	Echinops_telfairi
ENSMODG00000013187	-	97	81.836	ENSEBUG00000001239	smarca5	96	82.942	Eptatretus_burgeri
ENSMODG00000013187	-	96	86.673	ENSEASG00005008218	SMARCA1	100	88.081	Equus_asinus_asinus
ENSMODG00000013187	-	99	89.189	ENSECAG00000012106	SMARCA1	98	89.382	Equus_caballus
ENSMODG00000013187	-	77	90.728	ENSEEUG00000014927	SMARCA1	82	90.728	Erinaceus_europaeus
ENSMODG00000013187	-	98	88.195	ENSELUG00000010515	smarca1	99	88.196	Esox_lucius
ENSMODG00000013187	-	99	89.632	ENSFCAG00000018496	SMARCA1	98	89.632	Felis_catus
ENSMODG00000013187	-	88	95.838	ENSFALG00000000209	SMARCA1	98	95.838	Ficedula_albicollis
ENSMODG00000013187	-	95	89.960	ENSFDAG00000009818	SMARCA1	96	90.900	Fukomys_damarensis
ENSMODG00000013187	-	94	83.894	ENSFHEG00000007687	smarca5	94	83.894	Fundulus_heteroclitus
ENSMODG00000013187	-	96	94.030	ENSGALG00000008431	SMARCA1	99	94.030	Gallus_gallus
ENSMODG00000013187	-	94	84.098	ENSGAFG00000017731	smarca5	99	80.892	Gambusia_affinis
ENSMODG00000013187	-	94	96.914	ENSGAGG00000023575	SMARCA1	100	96.914	Gopherus_agassizii
ENSMODG00000013187	-	71	85.876	ENSGGOG00000012841	-	94	86.619	Gorilla_gorilla
ENSMODG00000013187	-	99	88.577	ENSHGLG00000003080	SMARCA1	98	88.588	Heterocephalus_glaber_female
ENSMODG00000013187	-	96	90.110	ENSHGLG00100001102	SMARCA1	99	90.433	Heterocephalus_glaber_male
ENSMODG00000013187	-	94	84.308	ENSHCOG00000005458	smarca5	95	83.996	Hippocampus_comes
ENSMODG00000013187	-	99	81.081	ENSIPUG00000005229	SMARCA5	100	81.081	Ictalurus_punctatus
ENSMODG00000013187	-	97	87.945	ENSIPUG00000016905	Smarca1	99	89.409	Ictalurus_punctatus
ENSMODG00000013187	-	99	89.835	ENSSTOG00000014524	SMARCA1	98	89.652	Ictidomys_tridecemlineatus
ENSMODG00000013187	-	97	90.278	ENSJJAG00000002593	Smarca1	98	88.610	Jaculus_jaculus
ENSMODG00000013187	-	94	84.000	ENSKMAG00000003777	smarca5	99	80.564	Kryptolebias_marmoratus
ENSMODG00000013187	-	99	80.837	ENSLBEG00000018112	smarca5	99	81.031	Labrus_bergylta
ENSMODG00000013187	-	93	82.062	ENSLBEG00000013295	SMARCA1	100	86.220	Labrus_bergylta
ENSMODG00000013187	-	99	92.000	ENSLACG00000016697	SMARCA1	99	92.787	Latimeria_chalumnae
ENSMODG00000013187	-	96	91.608	ENSLOCG00000014591	smarca1	96	92.167	Lepisosteus_oculatus
ENSMODG00000013187	-	96	91.054	ENSLAFG00000000896	SMARCA1	99	91.641	Loxodonta_africana
ENSMODG00000013187	-	99	89.545	ENSMFAG00000002117	SMARCA1	99	90.120	Macaca_fascicularis
ENSMODG00000013187	-	99	88.517	ENSMMUG00000008818	SMARCA1	99	92.542	Macaca_mulatta
ENSMODG00000013187	-	99	88.517	ENSMNEG00000041768	SMARCA1	99	90.120	Macaca_nemestrina
ENSMODG00000013187	-	99	89.545	ENSMLEG00000043198	SMARCA1	98	89.555	Mandrillus_leucophaeus
ENSMODG00000013187	-	94	84.205	ENSMAMG00000014294	smarca5	94	84.205	Mastacembelus_armatus
ENSMODG00000013187	-	94	84.615	ENSMZEG00005009369	smarca5	99	81.712	Maylandia_zebra
ENSMODG00000013187	-	96	94.077	ENSMGAG00000007042	SMARCA1	99	94.077	Meleagris_gallopavo
ENSMODG00000013187	-	97	88.004	ENSMAUG00000008133	Smarca1	97	88.016	Mesocricetus_auratus
ENSMODG00000013187	-	99	90.019	ENSMICG00000015768	SMARCA1	98	90.019	Microcebus_murinus
ENSMODG00000013187	-	99	88.054	ENSMOCG00000009464	Smarca1	98	88.065	Microtus_ochrogaster
ENSMODG00000013187	-	94	82.564	ENSMMOG00000005547	smarca5	98	82.564	Mola_mola
ENSMODG00000013187	-	94	83.897	ENSMALG00000002081	smarca5	94	84.517	Monopterus_albus
ENSMODG00000013187	-	99	88.235	MGP_CAROLIEiJ_G0033034	Smarca1	98	88.428	Mus_caroli
ENSMODG00000013187	-	99	88.428	ENSMUSG00000031099	Smarca1	98	88.428	Mus_musculus
ENSMODG00000013187	-	99	88.235	MGP_PahariEiJ_G0031579	Smarca1	98	88.235	Mus_pahari
ENSMODG00000013187	-	99	88.428	MGP_SPRETEiJ_G0034192	Smarca1	98	88.428	Mus_spretus
ENSMODG00000013187	-	99	88.421	ENSMPUG00000017423	SMARCA1	92	88.528	Mustela_putorius_furo
ENSMODG00000013187	-	99	87.094	ENSMLUG00000029614	SMARCA1	98	87.094	Myotis_lucifugus
ENSMODG00000013187	-	94	91.020	ENSNGAG00000006492	Smarca1	97	88.791	Nannospalax_galili
ENSMODG00000013187	-	94	84.615	ENSNBRG00000004463	smarca5	98	84.615	Neolamprologus_brichardi
ENSMODG00000013187	-	99	87.943	ENSNLEG00000015179	SMARCA1	97	91.331	Nomascus_leucogenys
ENSMODG00000013187	-	91	88.340	ENSMEUG00000008819	SMARCA1	100	88.340	Notamacropus_eugenii
ENSMODG00000013187	-	97	88.856	ENSODEG00000012163	SMARCA1	97	88.856	Octodon_degus
ENSMODG00000013187	-	94	84.615	ENSONIG00000009993	smarca5	99	81.712	Oreochromis_niloticus
ENSMODG00000013187	-	94	97.840	ENSOANG00000002862	SMARCA1	100	97.840	Ornithorhynchus_anatinus
ENSMODG00000013187	-	96	91.291	ENSOCUG00000001047	SMARCA1	98	89.535	Oryctolagus_cuniculus
ENSMODG00000013187	-	94	84.718	ENSORLG00000021998	smarca5	98	80.617	Oryzias_latipes
ENSMODG00000013187	-	94	84.615	ENSORLG00020017679	smarca5	94	84.615	Oryzias_latipes_hni
ENSMODG00000013187	-	94	84.718	ENSORLG00015017210	smarca5	98	80.810	Oryzias_latipes_hsok
ENSMODG00000013187	-	94	84.718	ENSOMEG00000000086	smarca5	99	80.695	Oryzias_melastigma
ENSMODG00000013187	-	97	88.770	ENSOGAG00000004399	SMARCA1	97	88.780	Otolemur_garnettii
ENSMODG00000013187	-	96	90.030	ENSOARG00000014638	SMARCA1	100	91.939	Ovis_aries
ENSMODG00000013187	-	99	89.545	ENSPPAG00000034647	SMARCA1	98	89.555	Pan_paniscus
ENSMODG00000013187	-	99	89.826	ENSPPRG00000008929	SMARCA1	98	89.826	Panthera_pardus
ENSMODG00000013187	-	96	89.577	ENSPTIG00000000915	SMARCA1	97	90.139	Panthera_tigris_altaica
ENSMODG00000013187	-	99	89.545	ENSPTRG00000049876	SMARCA1	97	89.635	Pan_troglodytes
ENSMODG00000013187	-	99	89.545	ENSPANG00000003871	SMARCA1	98	89.555	Papio_anubis
ENSMODG00000013187	-	95	86.815	ENSPKIG00000013411	smarca1	97	86.842	Paramormyrops_kingsleyae
ENSMODG00000013187	-	96	95.064	ENSPSIG00000010101	SMARCA1	100	96.708	Pelodiscus_sinensis
ENSMODG00000013187	-	94	90.612	ENSPEMG00000017503	Smarca1	97	88.004	Peromyscus_maniculatus_bairdii
ENSMODG00000013187	-	98	98.427	ENSPCIG00000015460	SMARCA1	99	98.427	Phascolarctos_cinereus
ENSMODG00000013187	-	94	84.308	ENSPFOG00000007649	smarca5	94	84.308	Poecilia_formosa
ENSMODG00000013187	-	94	84.308	ENSPLAG00000003363	smarca5	94	84.308	Poecilia_latipinna
ENSMODG00000013187	-	94	84.410	ENSPMEG00000019849	smarca5	94	84.410	Poecilia_mexicana
ENSMODG00000013187	-	94	84.410	ENSPREG00000023250	smarca5	94	84.410	Poecilia_reticulata
ENSMODG00000013187	-	99	86.834	ENSPPYG00000020703	SMARCA1	98	86.847	Pongo_abelii
ENSMODG00000013187	-	78	82.436	ENSPCOG00000020722	SMARCA1	94	87.959	Propithecus_coquereli
ENSMODG00000013187	-	91	91.271	ENSPVAG00000003805	SMARCA1	97	82.583	Pteropus_vampyrus
ENSMODG00000013187	-	56	86.630	ENSPNYG00000012299	smarca5	89	86.630	Pundamilia_nyererei
ENSMODG00000013187	-	99	88.760	ENSRNOG00000003762	Smarca1	98	88.760	Rattus_norvegicus
ENSMODG00000013187	-	99	89.448	ENSRROG00000034167	SMARCA1	98	89.458	Rhinopithecus_roxellana
ENSMODG00000013187	-	98	89.040	ENSSBOG00000020641	SMARCA1	100	92.245	Saimiri_boliviensis_boliviensis
ENSMODG00000013187	-	94	89.620	ENSSHAG00000013518	SMARCA1	99	89.620	Sarcophilus_harrisii
ENSMODG00000013187	-	99	88.230	ENSSFOG00015009043	smarca1	99	88.035	Scleropages_formosus
ENSMODG00000013187	-	95	83.350	ENSSFOG00015016794	smarca5	100	84.639	Scleropages_formosus
ENSMODG00000013187	-	94	83.897	ENSSMAG00000004801	smarca5	99	79.730	Scophthalmus_maximus
ENSMODG00000013187	-	94	83.795	ENSSDUG00000020690	smarca5	94	83.795	Seriola_dumerili
ENSMODG00000013187	-	94	83.795	ENSSLDG00000025190	smarca5	94	83.795	Seriola_lalandi_dorsalis
ENSMODG00000013187	-	87	84.461	ENSSARG00000000842	SMARCA1	83	91.844	Sorex_araneus
ENSMODG00000013187	-	94	96.012	ENSSPUG00000000590	SMARCA1	97	93.954	Sphenodon_punctatus
ENSMODG00000013187	-	94	83.894	ENSSPAG00000002894	smarca5	98	84.056	Stegastes_partitus
ENSMODG00000013187	-	97	89.240	ENSSSCG00000012649	SMARCA1	98	89.370	Sus_scrofa
ENSMODG00000013187	-	95	95.010	ENSTGUG00000003899	-	100	95.010	Taeniopygia_guttata
ENSMODG00000013187	-	94	84.302	ENSTRUG00000014094	smarca5	95	84.302	Takifugu_rubripes
ENSMODG00000013187	-	94	83.385	ENSTNIG00000017717	smarca5	96	80.607	Tetraodon_nigroviridis
ENSMODG00000013187	-	94	84.763	ENSTBEG00000014973	SMARCA1	91	90.618	Tupaia_belangeri
ENSMODG00000013187	-	94	87.310	ENSTTRG00000006168	SMARCA1	98	87.951	Tursiops_truncatus
ENSMODG00000013187	-	99	89.158	ENSUAMG00000020201	SMARCA1	98	89.265	Ursus_americanus
ENSMODG00000013187	-	96	85.968	ENSUMAG00000004073	SMARCA1	98	90.431	Ursus_maritimus
ENSMODG00000013187	-	74	91.935	ENSVPAG00000010492	-	79	91.935	Vicugna_pacos
ENSMODG00000013187	-	96	91.600	ENSVVUG00000008878	SMARCA1	99	92.790	Vulpes_vulpes
ENSMODG00000013187	-	96	92.277	ENSXETG00000001526	smarca1	99	92.300	Xenopus_tropicalis
ENSMODG00000013187	-	94	83.996	ENSXCOG00000011170	smarca5	97	83.996	Xiphophorus_couchianus
ENSMODG00000013187	-	94	83.996	ENSXMAG00000009678	smarca5	97	85.417	Xiphophorus_maculatus