EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000013274 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 15855 bases
Position: chr6:286064785-286080639
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000016599	LSM	PF01423.22	1.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000016904	-	238	-	ENSMODP00000016599	62 (aa)	-	F7D9G3
ENSMODT00000043111	-	1485	-	ENSMODP00000040008	93 (aa)	-	K7E2K7

Gene Model

Click here to download ENSMODG00000013274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000013274's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000013274	-	77	39.583	ENSMODG00000028394	SNRPE	50	39.583

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000013274	-	100	100.000	ENSG00000106355	LSM5	100	100.000	Homo_sapiens
ENSMODG00000013274	-	100	96.774	ENSAPOG00000011743	LSM5	100	96.774	Acanthochromis_polyacanthus
ENSMODG00000013274	-	100	96.774	ENSAPOG00000020779	LSM5	68	96.774	Acanthochromis_polyacanthus
ENSMODG00000013274	-	100	100.000	ENSAMEG00000006700	LSM5	68	100.000	Ailuropoda_melanoleuca
ENSMODG00000013274	-	73	93.333	ENSACIG00000019185	lsm5	80	93.333	Amphilophus_citrinellus
ENSMODG00000013274	-	100	96.774	ENSAOCG00000001636	lsm5	68	96.774	Amphiprion_ocellaris
ENSMODG00000013274	-	100	96.774	ENSAPEG00000008151	lsm5	68	96.774	Amphiprion_percula
ENSMODG00000013274	-	100	96.774	ENSAPEG00000008201	lsm5	100	96.774	Amphiprion_percula
ENSMODG00000013274	-	87	94.444	ENSATEG00000020470	lsm5	76	93.333	Anabas_testudineus
ENSMODG00000013274	-	97	100.000	ENSAPLG00000008171	LSM5	81	100.000	Anas_platyrhynchos
ENSMODG00000013274	-	100	100.000	ENSANAG00000034409	-	68	100.000	Aotus_nancymaae
ENSMODG00000013274	-	100	90.323	ENSANAG00000037758	-	77	90.323	Aotus_nancymaae
ENSMODG00000013274	-	100	95.161	ENSANAG00000024192	-	65	95.161	Aotus_nancymaae
ENSMODG00000013274	-	100	96.774	ENSACLG00000012891	lsm5	70	96.774	Astatotilapia_calliptera
ENSMODG00000013274	-	100	78.462	ENSAMXG00000035543	lsm5	69	78.462	Astyanax_mexicanus
ENSMODG00000013274	-	100	100.000	ENSBTAG00000002332	LSM5	68	100.000	Bos_taurus
ENSMODG00000013274	-	100	79.032	WBGene00003079	lsm-5	68	79.032	Caenorhabditis_elegans
ENSMODG00000013274	-	100	87.097	ENSCJAG00000005678	-	69	87.097	Callithrix_jacchus
ENSMODG00000013274	-	100	98.387	ENSCAFG00000019261	-	68	98.387	Canis_familiaris
ENSMODG00000013274	-	100	100.000	ENSCAFG00020004946	LSM5	68	100.000	Canis_lupus_dingo
ENSMODG00000013274	-	73	75.556	ENSCHIG00000021428	-	63	71.186	Capra_hircus
ENSMODG00000013274	-	100	100.000	ENSCHIG00000024539	LSM5	68	100.000	Capra_hircus
ENSMODG00000013274	-	100	96.774	ENSCHIG00000004079	-	68	96.774	Capra_hircus
ENSMODG00000013274	-	100	100.000	ENSTSYG00000006449	-	68	100.000	Carlito_syrichta
ENSMODG00000013274	-	100	88.710	ENSTSYG00000026530	-	67	88.710	Carlito_syrichta
ENSMODG00000013274	-	92	91.228	ENSTSYG00000028728	-	67	91.228	Carlito_syrichta
ENSMODG00000013274	-	100	67.742	ENSTSYG00000036637	-	60	67.742	Carlito_syrichta
ENSMODG00000013274	-	100	90.323	ENSCAPG00000006980	LSM5	83	90.323	Cavia_aperea
ENSMODG00000013274	-	100	100.000	ENSCPOG00000036386	LSM5	76	95.556	Cavia_porcellus
ENSMODG00000013274	-	100	98.387	ENSCCAG00000032123	-	68	98.387	Cebus_capucinus
ENSMODG00000013274	-	100	100.000	ENSCCAG00000037808	-	68	100.000	Cebus_capucinus
ENSMODG00000013274	-	100	93.548	ENSCCAG00000032792	-	77	93.548	Cebus_capucinus
ENSMODG00000013274	-	97	86.667	ENSCCAG00000037334	-	78	86.667	Cebus_capucinus
ENSMODG00000013274	-	100	98.387	ENSCCAG00000000821	-	68	98.387	Cebus_capucinus
ENSMODG00000013274	-	100	85.484	ENSCATG00000014790	-	66	85.484	Cercocebus_atys
ENSMODG00000013274	-	100	100.000	ENSCATG00000040218	LSM5	100	100.000	Cercocebus_atys
ENSMODG00000013274	-	100	100.000	ENSCLAG00000000202	LSM5	76	95.556	Chinchilla_lanigera
ENSMODG00000013274	-	95	84.746	ENSCLAG00000005062	-	59	84.746	Chinchilla_lanigera
ENSMODG00000013274	-	74	100.000	ENSCHOG00000005335	LSM5	61	100.000	Choloepus_hoffmanni
ENSMODG00000013274	-	100	100.000	ENSCPBG00000013685	LSM5	68	100.000	Chrysemys_picta_bellii
ENSMODG00000013274	-	100	90.323	ENSCING00000020625	-	70	90.323	Ciona_intestinalis
ENSMODG00000013274	-	100	90.323	ENSCSAVG00000001439	-	70	90.323	Ciona_savignyi
ENSMODG00000013274	-	100	100.000	ENSCANG00000039909	LSM5	100	100.000	Colobus_angolensis_palliatus
ENSMODG00000013274	-	100	100.000	ENSCGRG00001015461	Lsm5	76	95.556	Cricetulus_griseus_chok1gshd
ENSMODG00000013274	-	100	100.000	ENSCGRG00000007677	Lsm5	83	100.000	Cricetulus_griseus_crigri
ENSMODG00000013274	-	73	93.333	ENSCSEG00000015286	lsm5	76	93.333	Cynoglossus_semilaevis
ENSMODG00000013274	-	100	96.774	ENSCVAG00000004262	lsm5	70	96.774	Cyprinodon_variegatus
ENSMODG00000013274	-	100	96.774	ENSDARG00000071573	lsm5	100	96.774	Danio_rerio
ENSMODG00000013274	-	94	89.655	ENSDNOG00000049495	-	63	89.655	Dasypus_novemcinctus
ENSMODG00000013274	-	100	100.000	ENSDNOG00000034958	LSM5	68	100.000	Dasypus_novemcinctus
ENSMODG00000013274	-	100	100.000	ENSDORG00000009422	Lsm5	76	95.556	Dipodomys_ordii
ENSMODG00000013274	-	98	85.246	FBgn0035675	CG6610	67	85.246	Drosophila_melanogaster
ENSMODG00000013274	-	100	74.194	ENSETEG00000001469	-	63	74.194	Echinops_telfairi
ENSMODG00000013274	-	100	79.032	ENSETEG00000016074	-	80	79.032	Echinops_telfairi
ENSMODG00000013274	-	100	100.000	ENSETEG00000018068	LSM5	68	100.000	Echinops_telfairi
ENSMODG00000013274	-	100	79.032	ENSETEG00000010651	-	66	79.032	Echinops_telfairi
ENSMODG00000013274	-	79	75.510	ENSETEG00000000777	-	56	75.510	Echinops_telfairi
ENSMODG00000013274	-	100	91.935	ENSEBUG00000008540	lsm5	68	91.935	Eptatretus_burgeri
ENSMODG00000013274	-	100	100.000	ENSEASG00005003500	LSM5	68	100.000	Equus_asinus_asinus
ENSMODG00000013274	-	100	79.032	ENSECAG00000018445	LSM5	65	79.032	Equus_caballus
ENSMODG00000013274	-	94	93.103	ENSEEUG00000004102	LSM5	97	93.103	Erinaceus_europaeus
ENSMODG00000013274	-	100	96.774	ENSELUG00000007792	lsm5	68	96.774	Esox_lucius
ENSMODG00000013274	-	100	100.000	ENSFCAG00000000230	LSM5	68	100.000	Felis_catus
ENSMODG00000013274	-	100	100.000	ENSFALG00000001892	LSM5	75	100.000	Ficedula_albicollis
ENSMODG00000013274	-	100	100.000	ENSFDAG00000008767	LSM5	76	95.556	Fukomys_damarensis
ENSMODG00000013274	-	100	70.968	ENSFDAG00000008685	-	70	70.968	Fukomys_damarensis
ENSMODG00000013274	-	100	82.258	ENSFHEG00000004011	lsm5	66	82.258	Fundulus_heteroclitus
ENSMODG00000013274	-	98	96.721	ENSGMOG00000018235	lsm5	68	96.721	Gadus_morhua
ENSMODG00000013274	-	100	100.000	ENSGALG00000041625	LSM5	68	100.000	Gallus_gallus
ENSMODG00000013274	-	100	96.774	ENSGAFG00000016824	lsm5	100	96.774	Gambusia_affinis
ENSMODG00000013274	-	100	96.774	ENSGACG00000005528	lsm5	68	96.774	Gasterosteus_aculeatus
ENSMODG00000013274	-	100	100.000	ENSGAGG00000015593	LSM5	68	100.000	Gopherus_agassizii
ENSMODG00000013274	-	100	100.000	ENSGGOG00000043469	LSM5	68	100.000	Gorilla_gorilla
ENSMODG00000013274	-	100	96.774	ENSHBUG00000013773	lsm5	70	96.774	Haplochromis_burtoni
ENSMODG00000013274	-	100	100.000	ENSHGLG00000011765	LSM5	76	95.556	Heterocephalus_glaber_female
ENSMODG00000013274	-	100	100.000	ENSHGLG00100015610	LSM5	75	100.000	Heterocephalus_glaber_male
ENSMODG00000013274	-	73	91.111	ENSHCOG00000008288	lsm5	76	91.111	Hippocampus_comes
ENSMODG00000013274	-	100	96.774	ENSIPUG00000021095	LSM5	68	96.774	Ictalurus_punctatus
ENSMODG00000013274	-	100	100.000	ENSSTOG00000012662	LSM5	76	95.556	Ictidomys_tridecemlineatus
ENSMODG00000013274	-	100	87.097	ENSSTOG00000033886	-	70	87.097	Ictidomys_tridecemlineatus
ENSMODG00000013274	-	81	92.000	ENSJJAG00000004475	-	63	92.000	Jaculus_jaculus
ENSMODG00000013274	-	100	100.000	ENSJJAG00000012145	-	76	95.556	Jaculus_jaculus
ENSMODG00000013274	-	100	79.032	ENSJJAG00000016144	-	75	79.032	Jaculus_jaculus
ENSMODG00000013274	-	100	95.161	ENSKMAG00000021861	lsm5	68	95.161	Kryptolebias_marmoratus
ENSMODG00000013274	-	100	95.161	ENSLACG00000022448	LSM5	68	95.161	Latimeria_chalumnae
ENSMODG00000013274	-	100	96.774	ENSLOCG00000012903	lsm5	68	96.774	Lepisosteus_oculatus
ENSMODG00000013274	-	94	86.207	ENSLAFG00000027938	-	73	86.207	Loxodonta_africana
ENSMODG00000013274	-	100	100.000	ENSLAFG00000029579	LSM5	68	100.000	Loxodonta_africana
ENSMODG00000013274	-	100	100.000	ENSMFAG00000038508	LSM5	68	100.000	Macaca_fascicularis
ENSMODG00000013274	-	100	98.387	ENSMFAG00000030152	-	68	98.387	Macaca_fascicularis
ENSMODG00000013274	-	100	87.097	ENSMMUG00000039822	-	66	87.097	Macaca_mulatta
ENSMODG00000013274	-	100	98.387	ENSMMUG00000030131	-	68	98.387	Macaca_mulatta
ENSMODG00000013274	-	100	98.387	ENSMNEG00000037935	-	68	98.387	Macaca_nemestrina
ENSMODG00000013274	-	100	100.000	ENSMNEG00000015331	LSM5	100	100.000	Macaca_nemestrina
ENSMODG00000013274	-	100	85.484	ENSMLEG00000034037	-	67	85.484	Mandrillus_leucophaeus
ENSMODG00000013274	-	100	100.000	ENSMLEG00000024945	LSM5	68	100.000	Mandrillus_leucophaeus
ENSMODG00000013274	-	100	91.935	ENSMAMG00000012869	lsm5	68	91.935	Mastacembelus_armatus
ENSMODG00000013274	-	100	96.774	ENSMZEG00005019554	lsm5	70	96.774	Maylandia_zebra
ENSMODG00000013274	-	100	100.000	ENSMGAG00000012117	LSM5	68	100.000	Meleagris_gallopavo
ENSMODG00000013274	-	100	100.000	ENSMAUG00000008132	-	68	100.000	Mesocricetus_auratus
ENSMODG00000013274	-	100	100.000	ENSMAUG00000012222	Lsm5	76	95.556	Mesocricetus_auratus
ENSMODG00000013274	-	100	100.000	ENSMICG00000005353	LSM5	68	100.000	Microcebus_murinus
ENSMODG00000013274	-	95	98.305	ENSMICG00000033928	-	77	98.305	Microcebus_murinus
ENSMODG00000013274	-	100	100.000	ENSMOCG00000012018	Lsm5	76	95.556	Microtus_ochrogaster
ENSMODG00000013274	-	100	96.774	ENSMMOG00000004026	lsm5	71	96.774	Mola_mola
ENSMODG00000013274	-	100	91.935	ENSMALG00000010343	lsm5	100	91.935	Monopterus_albus
ENSMODG00000013274	-	100	100.000	MGP_CAROLIEiJ_G0028421	Lsm5	76	95.556	Mus_caroli
ENSMODG00000013274	-	100	100.000	ENSMUSG00000091625	Lsm5	76	95.556	Mus_musculus
ENSMODG00000013274	-	100	100.000	MGP_PahariEiJ_G0022171	Lsm5	76	95.556	Mus_pahari
ENSMODG00000013274	-	100	100.000	MGP_SPRETEiJ_G0029423	Lsm5	76	95.556	Mus_spretus
ENSMODG00000013274	-	100	100.000	ENSMLUG00000017028	LSM5	68	100.000	Myotis_lucifugus
ENSMODG00000013274	-	100	100.000	ENSNGAG00000024142	Lsm5	76	95.556	Nannospalax_galili
ENSMODG00000013274	-	79	91.837	ENSNGAG00000022569	-	59	91.837	Nannospalax_galili
ENSMODG00000013274	-	87	91.071	ENSNGAG00000017707	-	64	91.071	Nannospalax_galili
ENSMODG00000013274	-	92	96.491	ENSNBRG00000011386	lsm5	76	96.491	Neolamprologus_brichardi
ENSMODG00000013274	-	100	100.000	ENSNLEG00000015268	LSM5	68	100.000	Nomascus_leucogenys
ENSMODG00000013274	-	100	100.000	ENSOPRG00000002443	LSM5	83	100.000	Ochotona_princeps
ENSMODG00000013274	-	100	100.000	ENSODEG00000008258	-	76	95.556	Octodon_degus
ENSMODG00000013274	-	100	100.000	ENSODEG00000019072	-	68	100.000	Octodon_degus
ENSMODG00000013274	-	94	58.621	ENSOANG00000014540	-	77	58.621	Ornithorhynchus_anatinus
ENSMODG00000013274	-	100	100.000	ENSOCUG00000029043	LSM5	68	100.000	Oryctolagus_cuniculus
ENSMODG00000013274	-	100	95.161	ENSORLG00020003019	lsm5	65	95.161	Oryzias_latipes_hni
ENSMODG00000013274	-	100	95.161	ENSORLG00015003338	lsm5	68	95.161	Oryzias_latipes_hsok
ENSMODG00000013274	-	100	95.161	ENSOMEG00000001078	lsm5	68	95.161	Oryzias_melastigma
ENSMODG00000013274	-	100	100.000	ENSOGAG00000013892	LSM5	68	100.000	Otolemur_garnettii
ENSMODG00000013274	-	100	100.000	ENSOARG00000006944	LSM5	68	100.000	Ovis_aries
ENSMODG00000013274	-	100	100.000	ENSPPAG00000003697	-	68	100.000	Pan_paniscus
ENSMODG00000013274	-	100	100.000	ENSPPRG00000002550	LSM5	68	100.000	Panthera_pardus
ENSMODG00000013274	-	100	100.000	ENSPTIG00000015604	LSM5	68	100.000	Panthera_tigris_altaica
ENSMODG00000013274	-	100	75.806	ENSPTRG00000049488	-	67	79.032	Pan_troglodytes
ENSMODG00000013274	-	100	100.000	ENSPTRG00000019057	LSM5	68	100.000	Pan_troglodytes
ENSMODG00000013274	-	100	100.000	ENSPANG00000032179	-	68	100.000	Papio_anubis
ENSMODG00000013274	-	100	87.097	ENSPANG00000032538	-	66	87.097	Papio_anubis
ENSMODG00000013274	-	100	98.387	ENSPANG00000033477	-	68	98.387	Papio_anubis
ENSMODG00000013274	-	100	96.774	ENSPKIG00000011910	lsm5	68	96.774	Paramormyrops_kingsleyae
ENSMODG00000013274	-	97	100.000	ENSPSIG00000014796	LSM5	81	100.000	Pelodiscus_sinensis
ENSMODG00000013274	-	100	96.774	ENSPMGG00000011699	lsm5	100	96.774	Periophthalmus_magnuspinnatus
ENSMODG00000013274	-	100	74.194	ENSPEMG00000022375	-	65	74.194	Peromyscus_maniculatus_bairdii
ENSMODG00000013274	-	100	96.774	ENSPFOG00000001433	lsm5	68	96.774	Poecilia_formosa
ENSMODG00000013274	-	100	96.774	ENSPLAG00000009665	lsm5	68	96.774	Poecilia_latipinna
ENSMODG00000013274	-	100	96.774	ENSPMEG00000022265	lsm5	68	96.774	Poecilia_mexicana
ENSMODG00000013274	-	100	96.774	ENSPREG00000022452	lsm5	100	96.774	Poecilia_reticulata
ENSMODG00000013274	-	100	95.161	ENSPPYG00000017661	LSM5	68	95.161	Pongo_abelii
ENSMODG00000013274	-	84	100.000	ENSPCAG00000013740	LSM5	64	100.000	Procavia_capensis
ENSMODG00000013274	-	100	100.000	ENSPVAG00000009786	LSM5	68	100.000	Pteropus_vampyrus
ENSMODG00000013274	-	100	96.774	ENSPNYG00000022236	lsm5	70	96.774	Pundamilia_nyererei
ENSMODG00000013274	-	100	96.774	ENSPNAG00000001887	lsm5	68	96.774	Pygocentrus_nattereri
ENSMODG00000013274	-	100	98.413	ENSRNOG00000027305	AABR07065089.1	68	98.413	Rattus_norvegicus
ENSMODG00000013274	-	100	100.000	ENSRNOG00000042126	Lsm5	68	100.000	Rattus_norvegicus
ENSMODG00000013274	-	100	98.387	ENSRBIG00000024431	-	68	98.387	Rhinopithecus_bieti
ENSMODG00000013274	-	100	100.000	ENSRBIG00000030714	-	68	100.000	Rhinopithecus_bieti
ENSMODG00000013274	-	100	100.000	ENSRBIG00000027803	-	100	100.000	Rhinopithecus_bieti
ENSMODG00000013274	-	100	100.000	ENSRBIG00000030340	-	68	100.000	Rhinopithecus_bieti
ENSMODG00000013274	-	100	100.000	ENSRROG00000004655	-	68	100.000	Rhinopithecus_roxellana
ENSMODG00000013274	-	100	100.000	ENSRROG00000042782	-	100	100.000	Rhinopithecus_roxellana
ENSMODG00000013274	-	100	100.000	ENSRROG00000023884	-	68	100.000	Rhinopithecus_roxellana
ENSMODG00000013274	-	94	52.381	YER146W	-	68	52.381	Saccharomyces_cerevisiae
ENSMODG00000013274	-	100	100.000	ENSSBOG00000012312	LSM5	68	100.000	Saimiri_boliviensis_boliviensis
ENSMODG00000013274	-	100	98.387	ENSSBOG00000019124	-	68	98.387	Saimiri_boliviensis_boliviensis
ENSMODG00000013274	-	100	88.710	ENSSBOG00000034794	-	77	88.710	Saimiri_boliviensis_boliviensis
ENSMODG00000013274	-	100	96.774	ENSSFOG00015010099	lsm5	68	96.774	Scleropages_formosus
ENSMODG00000013274	-	73	93.333	ENSSMAG00000007895	lsm5	76	93.333	Scophthalmus_maximus
ENSMODG00000013274	-	100	96.774	ENSSDUG00000010762	lsm5	100	96.774	Seriola_dumerili
ENSMODG00000013274	-	100	96.774	ENSSLDG00000025242	lsm5	76	93.333	Seriola_lalandi_dorsalis
ENSMODG00000013274	-	94	77.586	ENSSLDG00000008014	-	69	77.586	Seriola_lalandi_dorsalis
ENSMODG00000013274	-	100	59.677	ENSSARG00000003330	LSM5	68	59.677	Sorex_araneus
ENSMODG00000013274	-	100	98.387	ENSSPUG00000002690	LSM5	100	98.387	Sphenodon_punctatus
ENSMODG00000013274	-	73	93.333	ENSSPAG00000005435	lsm5	76	93.333	Stegastes_partitus
ENSMODG00000013274	-	100	100.000	ENSSSCG00000026064	-	68	100.000	Sus_scrofa
ENSMODG00000013274	-	65	87.500	ENSSSCG00000029661	-	56	87.500	Sus_scrofa
ENSMODG00000013274	-	100	100.000	ENSTGUG00000017539	LSM5	68	100.000	Taeniopygia_guttata
ENSMODG00000013274	-	100	95.161	ENSTNIG00000008695	lsm5	70	95.161	Tetraodon_nigroviridis
ENSMODG00000013274	-	100	100.000	ENSTBEG00000004876	LSM5	68	100.000	Tupaia_belangeri
ENSMODG00000013274	-	100	100.000	ENSTTRG00000004237	LSM5	68	100.000	Tursiops_truncatus
ENSMODG00000013274	-	100	100.000	ENSVPAG00000009985	LSM5	68	100.000	Vicugna_pacos
ENSMODG00000013274	-	100	100.000	ENSVVUG00000021311	LSM5	68	100.000	Vulpes_vulpes
ENSMODG00000013274	-	85	98.113	ENSXETG00000026465	lsm5	65	98.113	Xenopus_tropicalis
ENSMODG00000013274	-	100	96.774	ENSXCOG00000015348	lsm5	100	96.774	Xiphophorus_couchianus
ENSMODG00000013274	-	100	96.774	ENSXMAG00000029988	lsm5	68	96.774	Xiphophorus_maculatus