EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000013861 (Gene tree)
Gene ID: 100010857
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 39263 bases
Position: chr4:361312348-361351610
Accession: 100010857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000017424	PWI	PF01480.17	4.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000017749	SRRM1-201	4445	-	ENSMODP00000017424	900 (aa)	XP_001362878	F6SCP1

Gene Model

Click here to download ENSMODG00000013861's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03013	RNA transport	KEGG
mdo03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000013861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000013861	SRRM1	55	96.146	ENSCCAG00000029474	SRRM1	96	96.146	Cebus_capucinus
ENSMODG00000013861	SRRM1	63	89.098	ENSGALG00000001283	SRRM1	99	100.000	Gallus_gallus
ENSMODG00000013861	SRRM1	64	99.160	ENSMEUG00000014704	SRRM1	63	99.160	Notamacropus_eugenii
ENSMODG00000013861	SRRM1	96	97.914	ENSPCIG00000009214	SRRM1	100	97.914	Phascolarctos_cinereus
ENSMODG00000013861	SRRM1	56	94.821	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSMODG00000013861	SRRM1	96	93.798	ENSSHAG00000011061	SRRM1	100	93.798	Sarcophilus_harrisii
ENSMODG00000013861	SRRM1	60	87.347	ENSSARG00000013718	SRRM1	60	87.449	Sorex_araneus
ENSMODG00000013861	SRRM1	56	95.169	ENSVVUG00000026966	SRRM1	50	97.059	Vulpes_vulpes