EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000013904 (Gene tree)
Gene ID: 100028059
Gene Symbol: -
Alias: U1-C|Yhc1
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 22540 bases
Position: chr2:273423508-273446047
Accession: 100028059
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000017392	zf-U1	PF06220.12	8.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000017714	-	1937	-	ENSMODP00000017392	159 (aa)	XP_001378181	F6VBS4

Gene Model

Click here to download ENSMODG00000013904's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000013904's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000013904	-	100	98.742	ENSG00000124562	SNRPC	100	98.742	Homo_sapiens
ENSMODG00000013904	-	100	96.855	ENSAMEG00000000963	SNRPC	88	96.855	Ailuropoda_melanoleuca
ENSMODG00000013904	-	99	98.089	ENSACAG00000015721	SNRPC	87	98.089	Anolis_carolinensis
ENSMODG00000013904	-	100	88.050	ENSANAG00000019726	-	92	88.679	Aotus_nancymaae
ENSMODG00000013904	-	100	98.113	ENSANAG00000007843	-	100	98.113	Aotus_nancymaae
ENSMODG00000013904	-	100	98.742	ENSANAG00000019696	-	100	98.742	Aotus_nancymaae
ENSMODG00000013904	-	100	74.843	ENSANAG00000021444	-	61	81.250	Aotus_nancymaae
ENSMODG00000013904	-	100	94.340	ENSANAG00000019157	-	100	94.340	Aotus_nancymaae
ENSMODG00000013904	-	100	86.164	ENSANAG00000021026	-	100	79.245	Aotus_nancymaae
ENSMODG00000013904	-	99	91.139	ENSANAG00000020588	-	92	91.139	Aotus_nancymaae
ENSMODG00000013904	-	100	85.535	ENSAMXG00000032641	snrpc	87	85.535	Astyanax_mexicanus
ENSMODG00000013904	-	100	98.742	ENSBTAG00000024549	SNRPC	100	98.742	Bos_taurus
ENSMODG00000013904	-	100	98.742	ENSCJAG00000015321	-	100	98.742	Callithrix_jacchus
ENSMODG00000013904	-	100	97.484	ENSCJAG00000043055	-	100	97.484	Callithrix_jacchus
ENSMODG00000013904	-	100	96.226	ENSCJAG00000041822	-	100	96.226	Callithrix_jacchus
ENSMODG00000013904	-	100	77.987	ENSCAFG00000025525	-	100	77.987	Canis_familiaris
ENSMODG00000013904	-	74	98.305	ENSCAFG00000001231	-	93	98.305	Canis_familiaris
ENSMODG00000013904	-	100	96.875	ENSCAFG00000028988	-	100	96.875	Canis_familiaris
ENSMODG00000013904	-	100	94.340	ENSCAFG00000031775	-	100	94.340	Canis_familiaris
ENSMODG00000013904	-	99	87.261	ENSCAFG00020009944	-	90	87.261	Canis_lupus_dingo
ENSMODG00000013904	-	100	78.090	ENSCAFG00020026577	-	100	84.270	Canis_lupus_dingo
ENSMODG00000013904	-	100	94.969	ENSCAFG00020005758	-	99	95.541	Canis_lupus_dingo
ENSMODG00000013904	-	100	94.340	ENSCAFG00020017383	-	100	94.340	Canis_lupus_dingo
ENSMODG00000013904	-	100	98.742	ENSCAFG00020005945	-	100	98.742	Canis_lupus_dingo
ENSMODG00000013904	-	100	98.113	ENSCHIG00000012087	-	100	98.113	Capra_hircus
ENSMODG00000013904	-	100	98.742	ENSTSYG00000011216	-	100	98.742	Carlito_syrichta
ENSMODG00000013904	-	100	82.390	ENSTSYG00000025721	-	100	72.956	Carlito_syrichta
ENSMODG00000013904	-	99	87.975	ENSTSYG00000029745	-	62	92.683	Carlito_syrichta
ENSMODG00000013904	-	89	98.592	ENSCAPG00000005161	SNRPC	100	98.592	Cavia_aperea
ENSMODG00000013904	-	100	98.742	ENSCPOG00000008563	SNRPC	100	98.742	Cavia_porcellus
ENSMODG00000013904	-	99	80.255	ENSCCAG00000026624	-	66	74.522	Cebus_capucinus
ENSMODG00000013904	-	98	90.385	ENSCCAG00000022751	-	95	90.385	Cebus_capucinus
ENSMODG00000013904	-	98	78.846	ENSCCAG00000022209	-	95	78.846	Cebus_capucinus
ENSMODG00000013904	-	100	93.082	ENSCCAG00000036059	-	89	93.082	Cebus_capucinus
ENSMODG00000013904	-	100	69.811	ENSCCAG00000028293	-	59	90.909	Cebus_capucinus
ENSMODG00000013904	-	100	98.742	ENSCATG00000035787	SNRPC	100	98.742	Cercocebus_atys
ENSMODG00000013904	-	100	98.742	ENSCLAG00000016920	SNRPC	100	98.742	Chinchilla_lanigera
ENSMODG00000013904	-	99	80.255	ENSCLAG00000010242	-	96	80.255	Chinchilla_lanigera
ENSMODG00000013904	-	100	78.090	ENSCSAG00000009821	SNRPC	100	84.270	Chlorocebus_sabaeus
ENSMODG00000013904	-	100	81.132	ENSCHOG00000011439	SNRPC	88	82.166	Choloepus_hoffmanni
ENSMODG00000013904	-	100	97.484	ENSCPBG00000027142	SNRPC	100	97.484	Chrysemys_picta_bellii
ENSMODG00000013904	-	97	49.351	ENSCING00000021229	ci-zf(matrin)-4	51	85.484	Ciona_intestinalis
ENSMODG00000013904	-	100	98.742	ENSCANG00000028035	SNRPC	100	98.742	Colobus_angolensis_palliatus
ENSMODG00000013904	-	100	86.164	ENSCGRG00001021483	-	100	84.277	Cricetulus_griseus_chok1gshd
ENSMODG00000013904	-	100	98.113	ENSCGRG00001009011	-	100	98.113	Cricetulus_griseus_chok1gshd
ENSMODG00000013904	-	100	96.226	ENSCGRG00000005005	Snrpc	100	96.226	Cricetulus_griseus_crigri
ENSMODG00000013904	-	100	84.277	ENSDARG00000009871	snrpc	100	84.277	Danio_rerio
ENSMODG00000013904	-	100	98.113	ENSDNOG00000034699	-	99	98.113	Dasypus_novemcinctus
ENSMODG00000013904	-	75	97.479	ENSDNOG00000042403	-	94	97.479	Dasypus_novemcinctus
ENSMODG00000013904	-	100	79.874	ENSDORG00000005955	Snrpc	66	78.981	Dipodomys_ordii
ENSMODG00000013904	-	95	78.146	ENSDORG00000029823	-	56	94.805	Dipodomys_ordii
ENSMODG00000013904	-	98	94.872	ENSETEG00000008268	-	100	94.872	Echinops_telfairi
ENSMODG00000013904	-	98	91.026	ENSETEG00000011265	-	100	91.026	Echinops_telfairi
ENSMODG00000013904	-	52	92.771	ENSETEG00000008756	-	75	93.506	Echinops_telfairi
ENSMODG00000013904	-	100	98.742	ENSEASG00005021007	SNRPC	100	98.742	Equus_asinus_asinus
ENSMODG00000013904	-	100	98.742	ENSECAG00000026848	SNRPC	100	98.742	Equus_caballus
ENSMODG00000013904	-	99	79.747	ENSEEUG00000014633	SNRPC	90	79.747	Erinaceus_europaeus
ENSMODG00000013904	-	100	79.245	ENSELUG00000000815	SNRPC	50	96.154	Esox_lucius
ENSMODG00000013904	-	100	98.742	ENSFCAG00000044077	-	100	98.742	Felis_catus
ENSMODG00000013904	-	100	91.824	ENSFCAG00000031775	-	88	91.824	Felis_catus
ENSMODG00000013904	-	100	97.484	ENSFALG00000003756	SNRPC	100	97.484	Ficedula_albicollis
ENSMODG00000013904	-	100	98.742	ENSFDAG00000018111	SNRPC	100	98.742	Fukomys_damarensis
ENSMODG00000013904	-	100	96.875	ENSGALG00000002773	SNRPC	100	96.875	Gallus_gallus
ENSMODG00000013904	-	100	97.484	ENSGAGG00000003063	SNRPC	100	97.484	Gopherus_agassizii
ENSMODG00000013904	-	100	98.742	ENSGGOG00000012499	SNRPC	100	98.742	Gorilla_gorilla
ENSMODG00000013904	-	100	81.132	ENSHGLG00000017741	-	100	78.616	Heterocephalus_glaber_female
ENSMODG00000013904	-	100	98.742	ENSHGLG00000013981	SNRPC	100	98.742	Heterocephalus_glaber_female
ENSMODG00000013904	-	81	73.643	ENSHGLG00000005871	-	100	74.214	Heterocephalus_glaber_female
ENSMODG00000013904	-	100	81.132	ENSHGLG00100010786	-	100	78.616	Heterocephalus_glaber_male
ENSMODG00000013904	-	100	93.711	ENSHGLG00100017764	-	100	93.711	Heterocephalus_glaber_male
ENSMODG00000013904	-	100	98.742	ENSHGLG00100009478	SNRPC	100	98.742	Heterocephalus_glaber_male
ENSMODG00000013904	-	100	86.164	ENSIPUG00000024851	snrpc	100	86.164	Ictalurus_punctatus
ENSMODG00000013904	-	100	98.742	ENSSTOG00000013786	SNRPC	100	98.742	Ictidomys_tridecemlineatus
ENSMODG00000013904	-	100	98.113	ENSJJAG00000021741	Snrpc	100	98.113	Jaculus_jaculus
ENSMODG00000013904	-	100	88.750	ENSLACG00000013753	SNRPC	88	91.139	Latimeria_chalumnae
ENSMODG00000013904	-	100	98.742	ENSLAFG00000013534	SNRPC	100	98.742	Loxodonta_africana
ENSMODG00000013904	-	100	98.113	ENSMFAG00000030525	-	100	98.113	Macaca_fascicularis
ENSMODG00000013904	-	100	98.742	ENSMFAG00000031764	-	100	98.742	Macaca_fascicularis
ENSMODG00000013904	-	100	88.679	ENSMMUG00000045425	-	100	88.679	Macaca_mulatta
ENSMODG00000013904	-	100	97.484	ENSMMUG00000039415	-	100	97.484	Macaca_mulatta
ENSMODG00000013904	-	100	97.484	ENSMMUG00000000869	-	97	97.484	Macaca_mulatta
ENSMODG00000013904	-	100	98.742	ENSMNEG00000032731	SNRPC	100	98.742	Macaca_nemestrina
ENSMODG00000013904	-	100	98.742	ENSMLEG00000033916	-	100	98.742	Mandrillus_leucophaeus
ENSMODG00000013904	-	97	89.677	ENSMLEG00000040224	-	89	89.677	Mandrillus_leucophaeus
ENSMODG00000013904	-	100	96.855	ENSMGAG00000006054	SNRPC	100	96.855	Meleagris_gallopavo
ENSMODG00000013904	-	100	83.648	ENSMICG00000036552	-	87	79.487	Microcebus_murinus
ENSMODG00000013904	-	100	86.792	ENSMICG00000009130	-	100	87.421	Microcebus_murinus
ENSMODG00000013904	-	100	98.113	ENSMICG00000032183	-	100	98.113	Microcebus_murinus
ENSMODG00000013904	-	100	98.113	ENSMICG00000007339	-	100	98.113	Microcebus_murinus
ENSMODG00000013904	-	100	98.113	ENSMOCG00000017609	Snrpc	100	98.113	Microtus_ochrogaster
ENSMODG00000013904	-	100	98.113	MGP_CAROLIEiJ_G0021308	Snrpc	100	98.113	Mus_caroli
ENSMODG00000013904	-	100	98.113	ENSMUSG00000024217	Snrpc	100	98.113	Mus_musculus
ENSMODG00000013904	-	74	97.458	MGP_SPRETEiJ_G0022221	-	98	97.458	Mus_spretus
ENSMODG00000013904	-	100	96.855	ENSMPUG00000003210	SNRPC	100	96.855	Mustela_putorius_furo
ENSMODG00000013904	-	100	96.855	ENSMLUG00000002488	SNRPC	100	96.855	Myotis_lucifugus
ENSMODG00000013904	-	100	98.113	ENSNGAG00000019686	Snrpc	100	98.113	Nannospalax_galili
ENSMODG00000013904	-	100	98.742	ENSNLEG00000034810	SNRPC	100	98.742	Nomascus_leucogenys
ENSMODG00000013904	-	89	99.296	ENSMEUG00000009300	SNRPC	100	99.296	Notamacropus_eugenii
ENSMODG00000013904	-	100	98.742	ENSODEG00000017080	-	100	98.742	Octodon_degus
ENSMODG00000013904	-	77	92.683	ENSODEG00000006008	-	88	92.683	Octodon_degus
ENSMODG00000013904	-	100	98.742	ENSODEG00000020370	-	100	98.742	Octodon_degus
ENSMODG00000013904	-	100	97.484	ENSODEG00000019633	-	100	97.484	Octodon_degus
ENSMODG00000013904	-	100	98.113	ENSODEG00000020201	-	100	98.113	Octodon_degus
ENSMODG00000013904	-	100	98.742	ENSODEG00000018985	-	100	98.742	Octodon_degus
ENSMODG00000013904	-	91	95.270	ENSOANG00000003405	SNRPC	100	95.270	Ornithorhynchus_anatinus
ENSMODG00000013904	-	100	98.742	ENSOCUG00000026668	-	100	98.742	Oryctolagus_cuniculus
ENSMODG00000013904	-	100	97.484	ENSOCUG00000026430	-	99	97.484	Oryctolagus_cuniculus
ENSMODG00000013904	-	100	96.226	ENSOCUG00000023292	-	100	96.226	Oryctolagus_cuniculus
ENSMODG00000013904	-	97	83.766	ENSOGAG00000028405	-	99	81.169	Otolemur_garnettii
ENSMODG00000013904	-	100	96.855	ENSOGAG00000026269	-	100	96.855	Otolemur_garnettii
ENSMODG00000013904	-	99	98.089	ENSOGAG00000008755	-	88	98.089	Otolemur_garnettii
ENSMODG00000013904	-	100	98.742	ENSOARG00000010823	SNRPC	100	98.742	Ovis_aries
ENSMODG00000013904	-	100	98.742	ENSPPAG00000043871	SNRPC	100	98.742	Pan_paniscus
ENSMODG00000013904	-	96	59.740	ENSPPRG00000016017	-	86	54.248	Panthera_pardus
ENSMODG00000013904	-	100	98.742	ENSPPRG00000008647	-	100	98.742	Panthera_pardus
ENSMODG00000013904	-	100	98.742	ENSPTIG00000021867	-	100	98.742	Panthera_tigris_altaica
ENSMODG00000013904	-	97	58.710	ENSPTIG00000013329	-	50	81.818	Panthera_tigris_altaica
ENSMODG00000013904	-	100	98.742	ENSPTRG00000018070	SNRPC	100	98.742	Pan_troglodytes
ENSMODG00000013904	-	100	98.742	ENSPANG00000022802	-	100	98.742	Papio_anubis
ENSMODG00000013904	-	100	87.421	ENSPANG00000018228	-	94	87.421	Papio_anubis
ENSMODG00000013904	-	59	87.234	ENSPKIG00000003136	snrpc	50	93.590	Paramormyrops_kingsleyae
ENSMODG00000013904	-	99	97.452	ENSPSIG00000004876	SNRPC	77	97.452	Pelodiscus_sinensis
ENSMODG00000013904	-	100	86.164	ENSPEMG00000002763	-	100	84.277	Peromyscus_maniculatus_bairdii
ENSMODG00000013904	-	100	98.113	ENSPEMG00000010773	Snrpc	100	98.113	Peromyscus_maniculatus_bairdii
ENSMODG00000013904	-	52	97.590	ENSPPYG00000029902	-	84	97.590	Pongo_abelii
ENSMODG00000013904	-	99	98.089	ENSPCAG00000016885	SNRPC	90	98.089	Procavia_capensis
ENSMODG00000013904	-	100	98.742	ENSPCOG00000004904	SNRPC	100	98.742	Propithecus_coquereli
ENSMODG00000013904	-	99	97.452	ENSPVAG00000015597	SNRPC	87	97.452	Pteropus_vampyrus
ENSMODG00000013904	-	100	98.113	ENSRNOG00000000493	Snrpc	100	98.113	Rattus_norvegicus
ENSMODG00000013904	-	100	98.742	ENSRBIG00000037567	-	100	98.742	Rhinopithecus_bieti
ENSMODG00000013904	-	100	88.050	ENSRBIG00000036353	-	83	88.050	Rhinopithecus_bieti
ENSMODG00000013904	-	100	98.113	ENSRBIG00000014819	-	100	98.113	Rhinopithecus_bieti
ENSMODG00000013904	-	100	98.113	ENSRBIG00000022998	-	100	98.113	Rhinopithecus_bieti
ENSMODG00000013904	-	100	98.742	ENSRROG00000041300	SNRPC	100	98.742	Rhinopithecus_roxellana
ENSMODG00000013904	-	98	82.051	ENSSBOG00000023189	-	91	82.051	Saimiri_boliviensis_boliviensis
ENSMODG00000013904	-	98	80.128	ENSSBOG00000032882	-	93	80.128	Saimiri_boliviensis_boliviensis
ENSMODG00000013904	-	95	81.457	ENSSBOG00000032361	-	75	81.967	Saimiri_boliviensis_boliviensis
ENSMODG00000013904	-	100	98.742	ENSSBOG00000031528	-	100	98.742	Saimiri_boliviensis_boliviensis
ENSMODG00000013904	-	99	98.726	ENSSHAG00000000945	-	87	98.726	Sarcophilus_harrisii
ENSMODG00000013904	-	58	86.957	ENSSFOG00015022422	snrpc	50	93.590	Scleropages_formosus
ENSMODG00000013904	-	100	74.843	ENSSARG00000008970	SNRPC	89	74.843	Sorex_araneus
ENSMODG00000013904	-	100	97.484	ENSSPUG00000002502	SNRPC	100	97.484	Sphenodon_punctatus
ENSMODG00000013904	-	100	98.742	ENSSSCG00000001531	SNRPC	100	98.742	Sus_scrofa
ENSMODG00000013904	-	100	96.226	ENSTGUG00000001773	SNRPC	100	96.226	Taeniopygia_guttata
ENSMODG00000013904	-	98	91.026	ENSTBEG00000013022	-	100	91.026	Tupaia_belangeri
ENSMODG00000013904	-	98	72.436	ENSTBEG00000015356	-	68	89.583	Tupaia_belangeri
ENSMODG00000013904	-	100	96.855	ENSTTRG00000007827	SNRPC	87	96.855	Tursiops_truncatus
ENSMODG00000013904	-	75	97.479	ENSUAMG00000014125	SNRPC	80	97.479	Ursus_americanus
ENSMODG00000013904	-	100	88.202	ENSUMAG00000010869	SNRPC	100	88.202	Ursus_maritimus
ENSMODG00000013904	-	89	73.239	ENSVPAG00000003106	SNRPC	79	73.239	Vicugna_pacos
ENSMODG00000013904	-	100	97.484	ENSVVUG00000021947	-	100	97.484	Vulpes_vulpes
ENSMODG00000013904	-	97	93.506	ENSVVUG00000010467	-	87	93.590	Vulpes_vulpes
ENSMODG00000013904	-	100	89.937	ENSXETG00000024721	snrpc	100	89.937	Xenopus_tropicalis