EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000014087 (Gene tree)
Gene ID: 100009959
Gene Symbol: -
Alias: -
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 19873 bases
Position: chrX:42893720-42913592
Accession: 100009959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000017614	RRM_1	PF00076.22	3.2e-18	1	2
ENSMODP00000017614	RRM_1	PF00076.22	3.2e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000017941	-	1570	-	ENSMODP00000017614	452 (aa)	XP_001362589	F6R4G6

Gene Model

Click here to download ENSMODG00000014087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000014087's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000014087	-	54	80.000	ENSMODG00000000199	-	100	80.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000014087	-	94	65.340	ENSG00000102241	HTATSF1	100	67.611	Homo_sapiens
ENSMODG00000014087	-	98	59.780	ENSAPOG00000009823	htatsf1	100	59.780	Acanthochromis_polyacanthus
ENSMODG00000014087	-	84	71.018	ENSAMEG00000002921	HTATSF1	50	71.018	Ailuropoda_melanoleuca
ENSMODG00000014087	-	97	62.009	ENSACIG00000020459	htatsf1	99	62.227	Amphilophus_citrinellus
ENSMODG00000014087	-	83	66.753	ENSAOCG00000020994	htatsf1	100	59.140	Amphiprion_ocellaris
ENSMODG00000014087	-	98	59.348	ENSAPEG00000016432	htatsf1	100	59.348	Amphiprion_percula
ENSMODG00000014087	-	90	64.929	ENSATEG00000008903	htatsf1	94	64.929	Anabas_testudineus
ENSMODG00000014087	-	88	71.186	ENSAPLG00000012401	HTATSF1	99	71.186	Anas_platyrhynchos
ENSMODG00000014087	-	83	69.211	ENSACAG00000009346	HTATSF1	99	68.462	Anolis_carolinensis
ENSMODG00000014087	-	98	61.207	ENSACLG00000008096	htatsf1	100	61.207	Astatotilapia_calliptera
ENSMODG00000014087	-	97	60.981	ENSAMXG00000008387	htatsf1	99	61.834	Astyanax_mexicanus
ENSMODG00000014087	-	84	68.930	ENSBTAG00000032711	HTATSF1	51	68.930	Bos_taurus
ENSMODG00000014087	-	74	37.353	WBGene00022025	Y65B4A.1	79	37.394	Caenorhabditis_elegans
ENSMODG00000014087	-	87	68.939	ENSCJAG00000003676	HTATSF1	53	68.939	Callithrix_jacchus
ENSMODG00000014087	-	84	71.540	ENSCAFG00000023294	HTATSF1	51	71.540	Canis_familiaris
ENSMODG00000014087	-	84	71.802	ENSCHIG00000000312	HTATSF1	50	71.802	Capra_hircus
ENSMODG00000014087	-	84	71.279	ENSTSYG00000028876	HTATSF1	50	71.279	Carlito_syrichta
ENSMODG00000014087	-	78	69.061	ENSCCAG00000025329	-	58	67.669	Cebus_capucinus
ENSMODG00000014087	-	87	69.114	ENSCCAG00000022701	-	53	69.173	Cebus_capucinus
ENSMODG00000014087	-	94	65.105	ENSCATG00000029963	HTATSF1	56	65.105	Cercocebus_atys
ENSMODG00000014087	-	86	70.051	ENSCLAG00000002718	HTATSF1	52	70.051	Chinchilla_lanigera
ENSMODG00000014087	-	94	65.105	ENSCSAG00000007505	HTATSF1	56	65.105	Chlorocebus_sabaeus
ENSMODG00000014087	-	97	70.946	ENSCPBG00000026092	HTATSF1	99	70.946	Chrysemys_picta_bellii
ENSMODG00000014087	-	86	45.205	ENSCING00000005914	-	87	45.205	Ciona_intestinalis
ENSMODG00000014087	-	77	46.459	ENSCSAVG00000000371	-	75	45.892	Ciona_savignyi
ENSMODG00000014087	-	94	65.105	ENSCANG00000028495	HTATSF1	56	65.105	Colobus_angolensis_palliatus
ENSMODG00000014087	-	94	67.056	ENSCGRG00001021602	Htatsf1	52	69.438	Cricetulus_griseus_chok1gshd
ENSMODG00000014087	-	98	61.874	ENSCVAG00000014070	htatsf1	99	62.092	Cyprinodon_variegatus
ENSMODG00000014087	-	98	61.656	ENSDARG00000056649	htatsf1	100	61.605	Danio_rerio
ENSMODG00000014087	-	77	43.514	FBgn0037081	barc	64	45.404	Drosophila_melanogaster
ENSMODG00000014087	-	87	44.416	ENSETEG00000006377	-	54	43.401	Echinops_telfairi
ENSMODG00000014087	-	82	55.076	ENSEBUG00000001534	htatsf1	79	55.076	Eptatretus_burgeri
ENSMODG00000014087	-	97	59.823	ENSELUG00000005486	htatsf1	90	60.879	Esox_lucius
ENSMODG00000014087	-	84	71.615	ENSFCAG00000031924	HTATSF1	51	71.615	Felis_catus
ENSMODG00000014087	-	97	71.806	ENSFALG00000003728	HTATSF1	99	71.806	Ficedula_albicollis
ENSMODG00000014087	-	84	71.018	ENSFDAG00000008617	HTATSF1	50	71.018	Fukomys_damarensis
ENSMODG00000014087	-	98	61.926	ENSFHEG00000020286	htatsf1	100	61.926	Fundulus_heteroclitus
ENSMODG00000014087	-	77	66.102	ENSGMOG00000016444	htatsf1	99	66.102	Gadus_morhua
ENSMODG00000014087	-	97	69.488	ENSGALG00000006410	HTATSF1	99	69.933	Gallus_gallus
ENSMODG00000014087	-	98	61.957	ENSGAFG00000003041	htatsf1	98	62.500	Gambusia_affinis
ENSMODG00000014087	-	97	60.879	ENSGACG00000020459	htatsf1	99	60.879	Gasterosteus_aculeatus
ENSMODG00000014087	-	94	65.340	ENSGGOG00000026072	HTATSF1	56	65.340	Gorilla_gorilla
ENSMODG00000014087	-	98	61.087	ENSHBUG00000004392	htatsf1	100	61.087	Haplochromis_burtoni
ENSMODG00000014087	-	86	69.797	ENSHGLG00000005328	HTATSF1	52	69.797	Heterocephalus_glaber_female
ENSMODG00000014087	-	97	58.758	ENSHCOG00000009056	htatsf1	99	59.292	Hippocampus_comes
ENSMODG00000014087	-	84	67.979	ENSIPUG00000017828	htatsf1	99	60.430	Ictalurus_punctatus
ENSMODG00000014087	-	84	71.802	ENSSTOG00000012505	HTATSF1	52	71.802	Ictidomys_tridecemlineatus
ENSMODG00000014087	-	98	62.500	ENSKMAG00000007622	htatsf1	100	62.500	Kryptolebias_marmoratus
ENSMODG00000014087	-	97	62.363	ENSLBEG00000001154	htatsf1	99	62.031	Labrus_bergylta
ENSMODG00000014087	-	97	63.883	ENSLACG00000015989	HTATSF1	99	63.883	Latimeria_chalumnae
ENSMODG00000014087	-	96	43.312	ENSLOCG00000015118	htatsf1	99	42.977	Lepisosteus_oculatus
ENSMODG00000014087	-	84	70.573	ENSLAFG00000014307	HTATSF1	56	70.573	Loxodonta_africana
ENSMODG00000014087	-	94	65.340	ENSMFAG00000044705	HTATSF1	56	65.340	Macaca_fascicularis
ENSMODG00000014087	-	94	65.105	ENSMMUG00000006450	HTATSF1	56	65.105	Macaca_mulatta
ENSMODG00000014087	-	94	65.105	ENSMNEG00000024084	HTATSF1	62	65.105	Macaca_nemestrina
ENSMODG00000014087	-	94	65.105	ENSMLEG00000035511	HTATSF1	56	65.105	Mandrillus_leucophaeus
ENSMODG00000014087	-	89	64.916	ENSMAMG00000021225	htatsf1	99	61.978	Mastacembelus_armatus
ENSMODG00000014087	-	98	61.207	ENSMZEG00005000485	htatsf1	100	61.207	Maylandia_zebra
ENSMODG00000014087	-	90	70.991	ENSMGAG00000003558	HTATSF1	97	70.991	Meleagris_gallopavo
ENSMODG00000014087	-	86	71.066	ENSMAUG00000007235	Htatsf1	52	71.066	Mesocricetus_auratus
ENSMODG00000014087	-	83	70.976	ENSMICG00000009348	HTATSF1	51	70.419	Microcebus_murinus
ENSMODG00000014087	-	94	65.654	ENSMOCG00000022370	-	56	65.654	Microtus_ochrogaster
ENSMODG00000014087	-	94	66.511	ENSMOCG00000023007	-	56	66.511	Microtus_ochrogaster
ENSMODG00000014087	-	98	60.088	ENSMMOG00000011013	htatsf1	100	60.088	Mola_mola
ENSMODG00000014087	-	97	59.783	ENSMALG00000019977	htatsf1	99	59.653	Monopterus_albus
ENSMODG00000014087	-	87	70.781	MGP_CAROLIEiJ_G0033094	Htatsf1	53	69.630	Mus_caroli
ENSMODG00000014087	-	87	70.101	ENSMUSG00000067873	Htatsf1	52	70.426	Mus_musculus
ENSMODG00000014087	-	87	70.426	MGP_SPRETEiJ_G0034249	Htatsf1	52	70.426	Mus_spretus
ENSMODG00000014087	-	84	71.540	ENSMPUG00000001901	HTATSF1	50	71.540	Mustela_putorius_furo
ENSMODG00000014087	-	84	69.974	ENSMLUG00000009234	-	53	69.974	Myotis_lucifugus
ENSMODG00000014087	-	84	70.235	ENSMLUG00000028418	-	50	70.235	Myotis_lucifugus
ENSMODG00000014087	-	87	71.285	ENSNGAG00000017831	Htatsf1	53	71.285	Nannospalax_galili
ENSMODG00000014087	-	98	61.422	ENSNBRG00000003818	htatsf1	100	61.422	Neolamprologus_brichardi
ENSMODG00000014087	-	94	64.871	ENSNLEG00000002746	HTATSF1	56	64.871	Nomascus_leucogenys
ENSMODG00000014087	-	92	78.520	ENSMEUG00000004133	-	94	81.658	Notamacropus_eugenii
ENSMODG00000014087	-	98	61.207	ENSONIG00000008638	htatsf1	100	61.207	Oreochromis_niloticus
ENSMODG00000014087	-	89	78.293	ENSOANG00000011674	-	99	78.960	Ornithorhynchus_anatinus
ENSMODG00000014087	-	84	72.324	ENSOCUG00000012570	HTATSF1	50	72.324	Oryctolagus_cuniculus
ENSMODG00000014087	-	97	60.691	ENSORLG00000002356	htatsf1	99	60.917	Oryzias_latipes
ENSMODG00000014087	-	97	60.991	ENSORLG00020017818	htatsf1	96	60.991	Oryzias_latipes_hni
ENSMODG00000014087	-	97	60.706	ENSORLG00015002268	htatsf1	99	60.706	Oryzias_latipes_hsok
ENSMODG00000014087	-	97	60.259	ENSOMEG00000007564	htatsf1	99	60.259	Oryzias_melastigma
ENSMODG00000014087	-	83	70.185	ENSOGAG00000005565	HTATSF1	50	70.185	Otolemur_garnettii
ENSMODG00000014087	-	94	65.340	ENSPPAG00000024268	HTATSF1	56	65.340	Pan_paniscus
ENSMODG00000014087	-	84	71.615	ENSPPRG00000014209	HTATSF1	51	71.615	Panthera_pardus
ENSMODG00000014087	-	94	65.340	ENSPTRG00000044591	HTATSF1	56	65.340	Pan_troglodytes
ENSMODG00000014087	-	98	61.607	ENSPKIG00000024852	htatsf1	100	61.607	Paramormyrops_kingsleyae
ENSMODG00000014087	-	75	76.163	ENSPSIG00000010192	HTATSF1	97	76.163	Pelodiscus_sinensis
ENSMODG00000014087	-	97	60.217	ENSPMGG00000006172	htatsf1	99	60.217	Periophthalmus_magnuspinnatus
ENSMODG00000014087	-	85	70.951	ENSPEMG00000022397	Htatsf1	51	70.951	Peromyscus_maniculatus_bairdii
ENSMODG00000014087	-	98	78.330	ENSPCIG00000018896	-	99	78.330	Phascolarctos_cinereus
ENSMODG00000014087	-	91	80.952	ENSPCIG00000030173	-	96	80.952	Phascolarctos_cinereus
ENSMODG00000014087	-	98	61.269	ENSPFOG00000007871	htatsf1	97	62.061	Poecilia_formosa
ENSMODG00000014087	-	98	61.488	ENSPLAG00000007532	htatsf1	100	61.623	Poecilia_latipinna
ENSMODG00000014087	-	98	61.269	ENSPMEG00000000352	htatsf1	100	61.926	Poecilia_mexicana
ENSMODG00000014087	-	98	63.020	ENSPREG00000007811	htatsf1	100	63.020	Poecilia_reticulata
ENSMODG00000014087	-	94	65.340	ENSPPYG00000020765	HTATSF1	56	65.340	Pongo_abelii
ENSMODG00000014087	-	87	61.905	ENSPCAG00000010576	HTATSF1	55	61.905	Procavia_capensis
ENSMODG00000014087	-	94	66.276	ENSPCOG00000021823	HTATSF1	52	70.558	Propithecus_coquereli
ENSMODG00000014087	-	84	71.018	ENSPVAG00000010281	HTATSF1	55	71.018	Pteropus_vampyrus
ENSMODG00000014087	-	98	61.207	ENSPNYG00000016693	htatsf1	100	61.207	Pundamilia_nyererei
ENSMODG00000014087	-	97	61.211	ENSPNAG00000006166	htatsf1	99	61.211	Pygocentrus_nattereri
ENSMODG00000014087	-	85	69.666	ENSRNOG00000027761	Htatsf1	50	69.666	Rattus_norvegicus
ENSMODG00000014087	-	94	65.105	ENSRROG00000021939	HTATSF1	56	65.105	Rhinopithecus_roxellana
ENSMODG00000014087	-	88	68.657	ENSSBOG00000027186	-	54	68.657	Saimiri_boliviensis_boliviensis
ENSMODG00000014087	-	87	69.309	ENSSBOG00000017914	-	52	69.309	Saimiri_boliviensis_boliviensis
ENSMODG00000014087	-	96	80.182	ENSSHAG00000018908	-	97	80.182	Sarcophilus_harrisii
ENSMODG00000014087	-	85	83.029	ENSSHAG00000006440	-	99	83.029	Sarcophilus_harrisii
ENSMODG00000014087	-	98	59.743	ENSSFOG00015012002	htatsf1	100	59.743	Scleropages_formosus
ENSMODG00000014087	-	96	60.793	ENSSMAG00000002970	htatsf1	99	61.184	Scophthalmus_maximus
ENSMODG00000014087	-	79	65.952	ENSSDUG00000020002	htatsf1	87	65.854	Seriola_dumerili
ENSMODG00000014087	-	98	60.044	ENSSLDG00000016880	htatsf1	100	60.131	Seriola_lalandi_dorsalis
ENSMODG00000014087	-	86	66.240	ENSSARG00000005193	HTATSF1	53	66.240	Sorex_araneus
ENSMODG00000014087	-	98	67.686	ENSSPUG00000014767	HTATSF1	100	67.982	Sphenodon_punctatus
ENSMODG00000014087	-	97	60.480	ENSSPAG00000000732	htatsf1	99	60.480	Stegastes_partitus
ENSMODG00000014087	-	83	72.559	ENSSSCG00000023062	HTATSF1	55	72.559	Sus_scrofa
ENSMODG00000014087	-	96	72.523	ENSTGUG00000002099	HTATSF1	98	72.523	Taeniopygia_guttata
ENSMODG00000014087	-	98	60.088	ENSTRUG00000013383	htatsf1	100	60.746	Takifugu_rubripes
ENSMODG00000014087	-	98	60.349	ENSTNIG00000016140	htatsf1	99	60.349	Tetraodon_nigroviridis
ENSMODG00000014087	-	75	73.099	ENSTTRG00000002269	HTATSF1	58	73.099	Tursiops_truncatus
ENSMODG00000014087	-	84	71.279	ENSUAMG00000012048	HTATSF1	51	71.279	Ursus_americanus
ENSMODG00000014087	-	84	71.279	ENSUMAG00000010393	HTATSF1	50	71.279	Ursus_maritimus
ENSMODG00000014087	-	95	66.219	ENSXETG00000019749	htatsf1	83	66.219	Xenopus_tropicalis
ENSMODG00000014087	-	96	63.218	ENSXCOG00000006912	htatsf1	99	63.218	Xiphophorus_couchianus
ENSMODG00000014087	-	98	63.901	ENSXMAG00000000490	htatsf1	100	63.901	Xiphophorus_maculatus