EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMODG00000014199 (Gene tree)
Gene ID: 100011840
Gene Symbol: CNOT1
Alias: AD-005|CDC39|KIAA1007|NOT1|NOT1H
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 95192 bases
Position: chr1:709359358-709454549
Accession: 100011840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000017750	Not1	PF04054.15	2.8e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000018078	CNOT1-201	7365	XM_001362989	ENSMODP00000017750	2377 (aa)	XP_001363026	F6TR11

Gene Model

Click here to download ENSMODG00000014199's gene model file

Pathways

Pathway ID	Pathway Name	Source
mdo03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000014199's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000014199	CNOT1	100	97.897	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSMODG00000014199	CNOT1	97	96.919	ENSAPOG00000005042	cnot1	100	95.938	Acanthochromis_polyacanthus
ENSMODG00000014199	CNOT1	100	97.770	ENSAMEG00000017298	CNOT1	100	97.770	Ailuropoda_melanoleuca
ENSMODG00000014199	CNOT1	90	89.893	ENSACIG00000016003	cnot1	100	89.893	Amphilophus_citrinellus
ENSMODG00000014199	CNOT1	100	90.306	ENSAPEG00000022342	cnot1	100	89.971	Amphiprion_percula
ENSMODG00000014199	CNOT1	97	97.059	ENSATEG00000012892	cnot1	100	96.078	Anabas_testudineus
ENSMODG00000014199	CNOT1	100	97.605	ENSAPLG00000007162	CNOT1	100	97.605	Anas_platyrhynchos
ENSMODG00000014199	CNOT1	91	96.198	ENSACAG00000001602	CNOT1	98	96.198	Anolis_carolinensis
ENSMODG00000014199	CNOT1	100	95.101	ENSANAG00000038198	CNOT1	100	95.101	Aotus_nancymaae
ENSMODG00000014199	CNOT1	97	97.059	ENSACLG00000014234	cnot1	100	96.078	Astatotilapia_calliptera
ENSMODG00000014199	CNOT1	100	90.959	ENSAMXG00000013170	cnot1	100	91.131	Astyanax_mexicanus
ENSMODG00000014199	CNOT1	100	97.981	ENSBTAG00000020782	CNOT1	100	98.008	Bos_taurus
ENSMODG00000014199	CNOT1	81	40.487	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSMODG00000014199	CNOT1	100	97.854	ENSCJAG00000011318	CNOT1	100	97.854	Callithrix_jacchus
ENSMODG00000014199	CNOT1	100	97.649	ENSCAFG00000008426	CNOT1	100	97.649	Canis_familiaris
ENSMODG00000014199	CNOT1	100	96.899	ENSCAFG00020010156	CNOT1	100	97.149	Canis_lupus_dingo
ENSMODG00000014199	CNOT1	100	97.981	ENSCHIG00000010452	CNOT1	100	97.981	Capra_hircus
ENSMODG00000014199	CNOT1	100	98.023	ENSTSYG00000006888	CNOT1	100	98.023	Carlito_syrichta
ENSMODG00000014199	CNOT1	100	93.395	ENSCPOG00000013026	CNOT1	100	93.395	Cavia_porcellus
ENSMODG00000014199	CNOT1	100	96.298	ENSCCAG00000026333	CNOT1	100	96.298	Cebus_capucinus
ENSMODG00000014199	CNOT1	100	97.939	ENSCATG00000032625	CNOT1	100	97.939	Cercocebus_atys
ENSMODG00000014199	CNOT1	100	97.897	ENSCLAG00000006289	CNOT1	100	97.897	Chinchilla_lanigera
ENSMODG00000014199	CNOT1	100	97.939	ENSCSAG00000004731	CNOT1	100	97.939	Chlorocebus_sabaeus
ENSMODG00000014199	CNOT1	81	98.940	ENSCHOG00000009712	CNOT1	83	98.940	Choloepus_hoffmanni
ENSMODG00000014199	CNOT1	98	94.634	ENSCPBG00000026222	CNOT1	98	96.047	Chrysemys_picta_bellii
ENSMODG00000014199	CNOT1	100	58.855	ENSCING00000009149	-	100	58.050	Ciona_intestinalis
ENSMODG00000014199	CNOT1	89	62.710	ENSCSAVG00000002414	-	95	78.146	Ciona_savignyi
ENSMODG00000014199	CNOT1	100	95.865	ENSCANG00000040534	CNOT1	100	95.865	Colobus_angolensis_palliatus
ENSMODG00000014199	CNOT1	100	97.560	ENSCGRG00001016365	Cnot1	100	97.560	Cricetulus_griseus_chok1gshd
ENSMODG00000014199	CNOT1	100	97.560	ENSCGRG00000001714	Cnot1	100	97.560	Cricetulus_griseus_crigri
ENSMODG00000014199	CNOT1	100	83.076	ENSCVAG00000018930	cnot1	100	82.910	Cyprinodon_variegatus
ENSMODG00000014199	CNOT1	100	89.904	ENSDARG00000004174	cnot1	100	89.862	Danio_rerio
ENSMODG00000014199	CNOT1	100	95.416	ENSDNOG00000013250	CNOT1	100	95.416	Dasypus_novemcinctus
ENSMODG00000014199	CNOT1	99	46.290	FBgn0085436	Not1	99	48.410	Drosophila_melanogaster
ENSMODG00000014199	CNOT1	84	96.992	ENSETEG00000012806	CNOT1	84	96.992	Echinops_telfairi
ENSMODG00000014199	CNOT1	81	76.716	ENSEBUG00000011534	cnot1	95	76.464	Eptatretus_burgeri
ENSMODG00000014199	CNOT1	100	94.295	ENSEASG00005005819	CNOT1	100	98.008	Equus_asinus_asinus
ENSMODG00000014199	CNOT1	100	98.023	ENSECAG00000009889	CNOT1	100	98.023	Equus_caballus
ENSMODG00000014199	CNOT1	90	97.806	ENSEEUG00000006015	CNOT1	90	97.806	Erinaceus_europaeus
ENSMODG00000014199	CNOT1	100	89.574	ENSELUG00000014085	cnot1	100	89.201	Esox_lucius
ENSMODG00000014199	CNOT1	100	97.735	ENSFCAG00000025155	CNOT1	100	97.735	Felis_catus
ENSMODG00000014199	CNOT1	100	97.644	ENSFALG00000007285	CNOT1	100	97.644	Ficedula_albicollis
ENSMODG00000014199	CNOT1	100	97.897	ENSFDAG00000013399	CNOT1	100	97.897	Fukomys_damarensis
ENSMODG00000014199	CNOT1	100	89.966	ENSFHEG00000020574	cnot1	100	90.008	Fundulus_heteroclitus
ENSMODG00000014199	CNOT1	91	89.223	ENSGMOG00000012864	cnot1	100	89.454	Gadus_morhua
ENSMODG00000014199	CNOT1	100	97.560	ENSGALG00000002301	CNOT1	100	97.560	Gallus_gallus
ENSMODG00000014199	CNOT1	100	88.922	ENSGAFG00000015005	cnot1	100	88.628	Gambusia_affinis
ENSMODG00000014199	CNOT1	91	89.875	ENSGACG00000002606	cnot1	100	94.424	Gasterosteus_aculeatus
ENSMODG00000014199	CNOT1	100	97.771	ENSGAGG00000022646	CNOT1	100	97.771	Gopherus_agassizii
ENSMODG00000014199	CNOT1	100	97.854	ENSGGOG00000009547	CNOT1	100	97.854	Gorilla_gorilla
ENSMODG00000014199	CNOT1	97	97.059	ENSHBUG00000001729	cnot1	100	96.078	Haplochromis_burtoni
ENSMODG00000014199	CNOT1	100	97.770	ENSHGLG00000014322	CNOT1	100	97.770	Heterocephalus_glaber_female
ENSMODG00000014199	CNOT1	100	89.177	ENSHCOG00000006501	cnot1	100	89.274	Hippocampus_comes
ENSMODG00000014199	CNOT1	100	88.922	ENSIPUG00000011915	cnot1	100	89.383	Ictalurus_punctatus
ENSMODG00000014199	CNOT1	100	97.897	ENSSTOG00000005490	CNOT1	100	97.897	Ictidomys_tridecemlineatus
ENSMODG00000014199	CNOT1	100	97.308	ENSJJAG00000000633	Cnot1	100	97.308	Jaculus_jaculus
ENSMODG00000014199	CNOT1	100	90.134	ENSKMAG00000006149	cnot1	100	89.887	Kryptolebias_marmoratus
ENSMODG00000014199	CNOT1	95	96.414	ENSLBEG00000004740	cnot1	100	95.020	Labrus_bergylta
ENSMODG00000014199	CNOT1	100	95.078	ENSLACG00000010869	CNOT1	100	95.078	Latimeria_chalumnae
ENSMODG00000014199	CNOT1	100	92.872	ENSLOCG00000006324	cnot1	100	92.872	Lepisosteus_oculatus
ENSMODG00000014199	CNOT1	100	97.856	ENSLAFG00000000098	CNOT1	100	97.856	Loxodonta_africana
ENSMODG00000014199	CNOT1	100	97.728	ENSMFAG00000035888	CNOT1	100	97.728	Macaca_fascicularis
ENSMODG00000014199	CNOT1	100	97.897	ENSMMUG00000014625	CNOT1	100	97.897	Macaca_mulatta
ENSMODG00000014199	CNOT1	100	95.176	ENSMNEG00000031820	CNOT1	100	97.899	Macaca_nemestrina
ENSMODG00000014199	CNOT1	100	96.550	ENSMLEG00000040933	CNOT1	100	96.550	Mandrillus_leucophaeus
ENSMODG00000014199	CNOT1	100	88.968	ENSMAMG00000016524	cnot1	100	88.754	Mastacembelus_armatus
ENSMODG00000014199	CNOT1	97	97.059	ENSMZEG00005016210	cnot1	100	96.078	Maylandia_zebra
ENSMODG00000014199	CNOT1	100	97.434	ENSMGAG00000001908	CNOT1	100	97.434	Meleagris_gallopavo
ENSMODG00000014199	CNOT1	100	97.939	ENSMICG00000007071	CNOT1	100	97.939	Microcebus_murinus
ENSMODG00000014199	CNOT1	100	97.602	ENSMOCG00000017969	Cnot1	100	97.602	Microtus_ochrogaster
ENSMODG00000014199	CNOT1	97	93.697	ENSMMOG00000019134	cnot1	100	92.717	Mola_mola
ENSMODG00000014199	CNOT1	100	90.176	ENSMALG00000008645	cnot1	100	90.218	Monopterus_albus
ENSMODG00000014199	CNOT1	95	99.048	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	Mus_caroli
ENSMODG00000014199	CNOT1	100	97.644	ENSMUSG00000036550	Cnot1	100	97.644	Mus_musculus
ENSMODG00000014199	CNOT1	100	97.602	MGP_PahariEiJ_G0023028	Cnot1	100	97.602	Mus_pahari
ENSMODG00000014199	CNOT1	100	97.644	MGP_SPRETEiJ_G0032549	Cnot1	100	97.644	Mus_spretus
ENSMODG00000014199	CNOT1	100	98.023	ENSMPUG00000004830	CNOT1	100	98.023	Mustela_putorius_furo
ENSMODG00000014199	CNOT1	100	97.434	ENSMLUG00000003728	CNOT1	100	97.434	Myotis_lucifugus
ENSMODG00000014199	CNOT1	100	97.897	ENSNGAG00000018628	Cnot1	100	97.897	Nannospalax_galili
ENSMODG00000014199	CNOT1	95	97.059	ENSNBRG00000019358	cnot1	100	96.078	Neolamprologus_brichardi
ENSMODG00000014199	CNOT1	100	97.897	ENSNLEG00000003566	CNOT1	100	97.897	Nomascus_leucogenys
ENSMODG00000014199	CNOT1	87	100.000	ENSMEUG00000006145	CNOT1	88	100.000	Notamacropus_eugenii
ENSMODG00000014199	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSMODG00000014199	CNOT1	100	97.854	ENSODEG00000016337	CNOT1	100	97.854	Octodon_degus
ENSMODG00000014199	CNOT1	100	90.414	ENSONIG00000007358	cnot1	100	90.008	Oreochromis_niloticus
ENSMODG00000014199	CNOT1	91	98.002	ENSOANG00000012109	CNOT1	100	98.308	Ornithorhynchus_anatinus
ENSMODG00000014199	CNOT1	100	97.939	ENSOCUG00000006911	CNOT1	100	97.939	Oryctolagus_cuniculus
ENSMODG00000014199	CNOT1	100	90.356	ENSORLG00000013734	cnot1	100	90.147	Oryzias_latipes
ENSMODG00000014199	CNOT1	100	88.665	ENSORLG00020017012	cnot1	100	88.302	Oryzias_latipes_hni
ENSMODG00000014199	CNOT1	100	88.581	ENSORLG00015007091	cnot1	100	88.050	Oryzias_latipes_hsok
ENSMODG00000014199	CNOT1	100	87.961	ENSOMEG00000015124	cnot1	100	88.250	Oryzias_melastigma
ENSMODG00000014199	CNOT1	100	97.939	ENSOGAG00000000543	CNOT1	100	97.939	Otolemur_garnettii
ENSMODG00000014199	CNOT1	100	97.981	ENSOARG00000001567	CNOT1	100	97.981	Ovis_aries
ENSMODG00000014199	CNOT1	100	97.897	ENSPPAG00000022013	CNOT1	100	97.897	Pan_paniscus
ENSMODG00000014199	CNOT1	100	98.023	ENSPPRG00000004867	CNOT1	100	98.023	Panthera_pardus
ENSMODG00000014199	CNOT1	100	98.023	ENSPTIG00000012589	CNOT1	100	98.023	Panthera_tigris_altaica
ENSMODG00000014199	CNOT1	100	97.609	ENSPTRG00000008183	CNOT1	100	97.609	Pan_troglodytes
ENSMODG00000014199	CNOT1	100	94.721	ENSPANG00000020901	CNOT1	100	94.721	Papio_anubis
ENSMODG00000014199	CNOT1	97	93.268	ENSPKIG00000002914	CNOT1	99	92.286	Paramormyrops_kingsleyae
ENSMODG00000014199	CNOT1	100	91.946	ENSPKIG00000023538	CNOT1	100	92.114	Paramormyrops_kingsleyae
ENSMODG00000014199	CNOT1	100	97.644	ENSPSIG00000005499	CNOT1	100	97.644	Pelodiscus_sinensis
ENSMODG00000014199	CNOT1	100	80.755	ENSPMAG00000009381	cnot1	100	80.697	Petromyzon_marinus
ENSMODG00000014199	CNOT1	100	98.207	ENSPCIG00000007343	CNOT1	100	98.804	Phascolarctos_cinereus
ENSMODG00000014199	CNOT1	99	89.603	ENSPFOG00000003497	cnot1	100	89.485	Poecilia_formosa
ENSMODG00000014199	CNOT1	95	96.016	ENSPLAG00000014018	cnot1	100	94.622	Poecilia_latipinna
ENSMODG00000014199	CNOT1	95	96.016	ENSPMEG00000005868	cnot1	100	94.622	Poecilia_mexicana
ENSMODG00000014199	CNOT1	95	96.016	ENSPREG00000018793	cnot1	100	94.622	Poecilia_reticulata
ENSMODG00000014199	CNOT1	100	97.939	ENSPPYG00000007410	CNOT1	100	97.939	Pongo_abelii
ENSMODG00000014199	CNOT1	90	96.082	ENSPCAG00000003241	CNOT1	90	96.082	Procavia_capensis
ENSMODG00000014199	CNOT1	100	97.609	ENSPCOG00000027139	CNOT1	100	97.609	Propithecus_coquereli
ENSMODG00000014199	CNOT1	100	95.372	ENSPVAG00000004243	CNOT1	100	95.372	Pteropus_vampyrus
ENSMODG00000014199	CNOT1	97	97.059	ENSPNYG00000012919	cnot1	100	96.078	Pundamilia_nyererei
ENSMODG00000014199	CNOT1	100	89.907	ENSPNAG00000000246	cnot1	100	89.950	Pygocentrus_nattereri
ENSMODG00000014199	CNOT1	100	97.560	ENSRNOG00000012271	Cnot1	100	97.560	Rattus_norvegicus
ENSMODG00000014199	CNOT1	100	95.721	ENSRBIG00000044598	CNOT1	100	95.721	Rhinopithecus_bieti
ENSMODG00000014199	CNOT1	100	97.939	ENSRROG00000000906	CNOT1	100	97.939	Rhinopithecus_roxellana
ENSMODG00000014199	CNOT1	56	30.882	YCR093W	CDC39	68	34.815	Saccharomyces_cerevisiae
ENSMODG00000014199	CNOT1	100	93.515	ENSSBOG00000029155	CNOT1	100	93.515	Saimiri_boliviensis_boliviensis
ENSMODG00000014199	CNOT1	100	99.412	ENSSHAG00000012187	CNOT1	100	99.412	Sarcophilus_harrisii
ENSMODG00000014199	CNOT1	100	90.277	ENSSFOG00015017614	cnot1	100	90.021	Scleropages_formosus
ENSMODG00000014199	CNOT1	97	97.059	ENSSMAG00000013844	cnot1	100	96.078	Scophthalmus_maximus
ENSMODG00000014199	CNOT1	97	96.919	ENSSDUG00000021491	cnot1	100	95.938	Seriola_dumerili
ENSMODG00000014199	CNOT1	97	96.919	ENSSLDG00000014816	cnot1	100	95.938	Seriola_lalandi_dorsalis
ENSMODG00000014199	CNOT1	84	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSMODG00000014199	CNOT1	100	90.394	ENSSPAG00000018802	cnot1	100	89.891	Stegastes_partitus
ENSMODG00000014199	CNOT1	100	97.897	ENSSSCG00000002799	CNOT1	100	98.008	Sus_scrofa
ENSMODG00000014199	CNOT1	100	97.605	ENSTGUG00000005919	CNOT1	100	97.605	Taeniopygia_guttata
ENSMODG00000014199	CNOT1	100	88.616	ENSTNIG00000018706	cnot1	100	88.532	Tetraodon_nigroviridis
ENSMODG00000014199	CNOT1	80	97.625	ENSTBEG00000000720	CNOT1	80	97.625	Tupaia_belangeri
ENSMODG00000014199	CNOT1	95	97.554	ENSTTRG00000008460	CNOT1	95	97.554	Tursiops_truncatus
ENSMODG00000014199	CNOT1	100	98.023	ENSUAMG00000009251	CNOT1	100	98.023	Ursus_americanus
ENSMODG00000014199	CNOT1	100	98.023	ENSUMAG00000021291	CNOT1	100	98.023	Ursus_maritimus
ENSMODG00000014199	CNOT1	97	95.577	ENSVPAG00000008846	CNOT1	97	95.577	Vicugna_pacos
ENSMODG00000014199	CNOT1	100	96.899	ENSVVUG00000024037	CNOT1	100	97.149	Vulpes_vulpes
ENSMODG00000014199	CNOT1	100	90.558	ENSXETG00000015900	cnot1	100	90.348	Xenopus_tropicalis
ENSMODG00000014199	CNOT1	100	89.089	ENSXCOG00000013552	cnot1	100	88.796	Xiphophorus_couchianus
ENSMODG00000014199	CNOT1	100	89.131	ENSXMAG00000006031	cnot1	100	88.838	Xiphophorus_maculatus