EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMODG00000014703 (Gene tree)
Gene ID
100028117
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Monodelphis_domestica
Status
putative
Strand
Minus strand
Length
61620 bases
Position
chr1:530327719-530389338
Accession
100028117
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMODP00000018379CPSF73-100_CPF11718.83.1e-5311
ENSMODP00000018379Beta-CaspPF10996.84e-3411
ENSMODP00000018379Lactamase_BPF00753.279.1e-1911
ENSMODP00000018379RMMBLPF07521.121.1e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMODT00000018712CPSF3-2013242XM_001371960ENSMODP00000018379691 (aa)XP_001371997F7D3K9
Gene Model
Click here to download ENSMODG00000014703's gene model file
Pathways
Pathway IDPathway NameSource
mdo03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000014703's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMODG00000014703CPSF37038.735ENSMODG00000006290INTS118238.735
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMODG00000014703CPSF310096.093ENSG00000119203CPSF3100100.000Homo_sapiens
ENSMODG00000014703CPSF39983.819ENSAPOG00000022087cpsf39883.819Acanthochromis_polyacanthus
ENSMODG00000014703CPSF37296.994ENSAPOG00000012241CPSF39096.982Acanthochromis_polyacanthus
ENSMODG00000014703CPSF310096.237ENSAMEG00000008493CPSF310096.237Ailuropoda_melanoleuca
ENSMODG00000014703CPSF39285.243ENSACIG00000023663CPSF39985.243Amphilophus_citrinellus
ENSMODG00000014703CPSF39280.691ENSACIG00000009846cpsf39980.691Amphilophus_citrinellus
ENSMODG00000014703CPSF39986.900ENSAOCG00000010077CPSF39886.900Amphiprion_ocellaris
ENSMODG00000014703CPSF39983.965ENSAOCG00000022056cpsf39490.986Amphiprion_ocellaris
ENSMODG00000014703CPSF39986.900ENSAPEG00000021167CPSF39886.900Amphiprion_percula
ENSMODG00000014703CPSF39984.111ENSAPEG00000019526cpsf39785.344Amphiprion_percula
ENSMODG00000014703CPSF39983.843ENSATEG00000003959cpsf39883.843Anabas_testudineus
ENSMODG00000014703CPSF39982.387ENSATEG00000014525CPSF39882.387Anabas_testudineus
ENSMODG00000014703CPSF39893.814ENSAPLG00000006941CPSF39893.814Anas_platyrhynchos
ENSMODG00000014703CPSF39391.745ENSACAG00000001759CPSF39991.745Anolis_carolinensis
ENSMODG00000014703CPSF310089.725ENSANAG00000031254CPSF310089.725Aotus_nancymaae
ENSMODG00000014703CPSF39784.077ENSACLG00000014484cpsf39984.077Astatotilapia_calliptera
ENSMODG00000014703CPSF39285.086ENSACLG00000018846CPSF39985.086Astatotilapia_calliptera
ENSMODG00000014703CPSF39986.900ENSAMXG00000004786cpsf39886.900Astyanax_mexicanus
ENSMODG00000014703CPSF310096.382ENSBTAG00000019735CPSF310096.382Bos_taurus
ENSMODG00000014703CPSF38561.564WBGene00013460cpsf-38561.564Caenorhabditis_elegans
ENSMODG00000014703CPSF310095.658ENSCJAG00000006276CPSF310095.658Callithrix_jacchus
ENSMODG00000014703CPSF310096.237ENSCAFG00000003375CPSF39596.237Canis_familiaris
ENSMODG00000014703CPSF39196.805ENSCAFG00020026799CPSF310096.805Canis_lupus_dingo
ENSMODG00000014703CPSF310096.382ENSCHIG00000013973CPSF310096.382Capra_hircus
ENSMODG00000014703CPSF310095.948ENSTSYG00000002967CPSF310095.948Carlito_syrichta
ENSMODG00000014703CPSF39894.955ENSCAPG00000013851CPSF310094.955Cavia_aperea
ENSMODG00000014703CPSF310095.080ENSCPOG00000011299CPSF310095.080Cavia_porcellus
ENSMODG00000014703CPSF310095.803ENSCCAG00000036730CPSF310095.803Cebus_capucinus
ENSMODG00000014703CPSF310093.208ENSCATG00000014770CPSF39998.967Cercocebus_atys
ENSMODG00000014703CPSF310095.224ENSCLAG00000002727CPSF310095.224Chinchilla_lanigera
ENSMODG00000014703CPSF310088.278ENSCSAG00000007125CPSF310088.278Chlorocebus_sabaeus
ENSMODG00000014703CPSF387100.000ENSCHOG00000000180CPSF38569.671Choloepus_hoffmanni
ENSMODG00000014703CPSF39994.194ENSCPBG00000014074CPSF39994.194Chrysemys_picta_bellii
ENSMODG00000014703CPSF39966.860ENSCING00000007214-9866.860Ciona_intestinalis
ENSMODG00000014703CPSF310083.741ENSCANG00000034435CPSF310083.741Colobus_angolensis_palliatus
ENSMODG00000014703CPSF310095.369ENSCGRG00001013134Cpsf310095.369Cricetulus_griseus_chok1gshd
ENSMODG00000014703CPSF310095.369ENSCGRG00000018319Cpsf310095.369Cricetulus_griseus_crigri
ENSMODG00000014703CPSF39985.901ENSCSEG00000002021CPSF39985.627Cynoglossus_semilaevis
ENSMODG00000014703CPSF39987.336ENSCVAG00000015067CPSF39887.336Cyprinodon_variegatus
ENSMODG00000014703CPSF39987.627ENSDARG00000027649cpsf39887.627Danio_rerio
ENSMODG00000014703CPSF310094.653ENSDNOG00000008940CPSF39594.653Dasypus_novemcinctus
ENSMODG00000014703CPSF39595.745ENSDORG00000014263Cpsf310095.745Dipodomys_ordii
ENSMODG00000014703CPSF39966.763FBgn0261065Cpsf739866.763Drosophila_melanogaster
ENSMODG00000014703CPSF39582.979ENSETEG00000003893CPSF310082.979Echinops_telfairi
ENSMODG00000014703CPSF39977.872ENSEBUG00000009018cpsf39878.014Eptatretus_burgeri
ENSMODG00000014703CPSF310096.237ENSEASG00005003970CPSF310096.237Equus_asinus_asinus
ENSMODG00000014703CPSF310096.237ENSECAG00000019911CPSF310096.237Equus_caballus
ENSMODG00000014703CPSF310080.897ENSEEUG00000015422CPSF310080.897Erinaceus_europaeus
ENSMODG00000014703CPSF39986.754ENSELUG00000013775cpsf39886.754Esox_lucius
ENSMODG00000014703CPSF310096.382ENSFCAG00000007852CPSF310096.382Felis_catus
ENSMODG00000014703CPSF39593.731ENSFALG00000006572CPSF310093.731Ficedula_albicollis
ENSMODG00000014703CPSF39994.775ENSFDAG00000006317CPSF39994.775Fukomys_damarensis
ENSMODG00000014703CPSF39983.673ENSFHEG00000014774cpsf39883.673Fundulus_heteroclitus
ENSMODG00000014703CPSF36067.470ENSFHEG00000012186CPSF39967.470Fundulus_heteroclitus
ENSMODG00000014703CPSF39985.465ENSGMOG00000003157cpsf39985.465Gadus_morhua
ENSMODG00000014703CPSF39993.750ENSGALG00000016424CPSF39993.750Gallus_gallus
ENSMODG00000014703CPSF39986.880ENSGAFG00000008016CPSF39886.880Gambusia_affinis
ENSMODG00000014703CPSF39280.975ENSGAFG00000019449cpsf39980.975Gambusia_affinis
ENSMODG00000014703CPSF36991.772ENSGAGG00000025583CPSF39391.772Gopherus_agassizii
ENSMODG00000014703CPSF310093.768ENSGGOG00000001757CPSF310095.794Gorilla_gorilla
ENSMODG00000014703CPSF36080.340ENSHBUG00000014332CPSF39980.340Haplochromis_burtoni
ENSMODG00000014703CPSF39984.012ENSHBUG00000001188cpsf39984.012Haplochromis_burtoni
ENSMODG00000014703CPSF310094.211ENSHGLG00000000666CPSF39994.211Heterocephalus_glaber_female
ENSMODG00000014703CPSF310094.211ENSHGLG00100007765CPSF39994.211Heterocephalus_glaber_male
ENSMODG00000014703CPSF39985.444ENSHCOG00000015957CPSF39785.444Hippocampus_comes
ENSMODG00000014703CPSF39983.454ENSHCOG00000007251cpsf39983.454Hippocampus_comes
ENSMODG00000014703CPSF39985.444ENSIPUG00000023488cpsf39885.444Ictalurus_punctatus
ENSMODG00000014703CPSF310096.671ENSSTOG00000004476CPSF310096.671Ictidomys_tridecemlineatus
ENSMODG00000014703CPSF310095.080ENSJJAG00000023415Cpsf310095.080Jaculus_jaculus
ENSMODG00000014703CPSF39986.900ENSKMAG00000007317CPSF39886.900Kryptolebias_marmoratus
ENSMODG00000014703CPSF39982.824ENSKMAG00000002806cpsf39882.824Kryptolebias_marmoratus
ENSMODG00000014703CPSF39977.875ENSLBEG00000020569cpsf39477.875Labrus_bergylta
ENSMODG00000014703CPSF39587.671ENSLBEG00000013492CPSF39887.671Labrus_bergylta
ENSMODG00000014703CPSF35577.368ENSLBEG00000015018-9977.368Labrus_bergylta
ENSMODG00000014703CPSF39982.678ENSLACG00000008308CPSF39882.678Latimeria_chalumnae
ENSMODG00000014703CPSF39988.921ENSLOCG00000016823cpsf39888.921Lepisosteus_oculatus
ENSMODG00000014703CPSF39995.197ENSLAFG00000009467CPSF310095.197Loxodonta_africana
ENSMODG00000014703CPSF310095.948ENSMFAG00000001339CPSF310095.948Macaca_fascicularis
ENSMODG00000014703CPSF39595.719ENSMMUG00000018038CPSF310095.719Macaca_mulatta
ENSMODG00000014703CPSF310083.357ENSMNEG00000039447CPSF310083.357Macaca_nemestrina
ENSMODG00000014703CPSF310096.093ENSMLEG00000026825CPSF310096.093Mandrillus_leucophaeus
ENSMODG00000014703CPSF39283.725ENSMAMG00000008835CPSF39983.725Mastacembelus_armatus
ENSMODG00000014703CPSF39984.402ENSMAMG00000003076cpsf39884.402Mastacembelus_armatus
ENSMODG00000014703CPSF39984.012ENSMZEG00005014358cpsf39984.012Maylandia_zebra
ENSMODG00000014703CPSF39987.482ENSMZEG00005006258CPSF39887.482Maylandia_zebra
ENSMODG00000014703CPSF39893.620ENSMGAG00000013995CPSF310093.620Meleagris_gallopavo
ENSMODG00000014703CPSF35590.862ENSMAUG00000000166Cpsf310090.862Mesocricetus_auratus
ENSMODG00000014703CPSF310090.738ENSMICG00000002363CPSF310090.738Microcebus_murinus
ENSMODG00000014703CPSF310091.606ENSMOCG00000020067Cpsf310091.606Microtus_ochrogaster
ENSMODG00000014703CPSF39481.135ENSMMOG00000018212CPSF39881.135Mola_mola
ENSMODG00000014703CPSF38071.779ENSMMOG00000011923CPSF38477.857Mola_mola
ENSMODG00000014703CPSF39984.302ENSMALG00000016416cpsf39984.302Monopterus_albus
ENSMODG00000014703CPSF39382.198ENSMALG00000011474CPSF39982.198Monopterus_albus
ENSMODG00000014703CPSF310095.224MGP_CAROLIEiJ_G0017640Cpsf310095.224Mus_caroli
ENSMODG00000014703CPSF310095.224ENSMUSG00000054309Cpsf396100.000Mus_musculus
ENSMODG00000014703CPSF310095.080MGP_PahariEiJ_G0029397Cpsf310095.080Mus_pahari
ENSMODG00000014703CPSF310095.224MGP_SPRETEiJ_G0018481Cpsf310095.224Mus_spretus
ENSMODG00000014703CPSF310095.658ENSMPUG00000013213CPSF310095.658Mustela_putorius_furo
ENSMODG00000014703CPSF310095.231ENSMLUG00000010636CPSF310095.231Myotis_lucifugus
ENSMODG00000014703CPSF310095.224ENSNGAG00000019836Cpsf310095.224Nannospalax_galili
ENSMODG00000014703CPSF39285.086ENSNBRG00000010525CPSF39985.086Neolamprologus_brichardi
ENSMODG00000014703CPSF39983.576ENSNBRG00000004770cpsf39983.576Neolamprologus_brichardi
ENSMODG00000014703CPSF310095.948ENSNLEG00000013359CPSF310095.948Nomascus_leucogenys
ENSMODG00000014703CPSF310065.702ENSMEUG00000013117-10065.702Notamacropus_eugenii
ENSMODG00000014703CPSF310087.554ENSOPRG00000008902CPSF310087.554Ochotona_princeps
ENSMODG00000014703CPSF310094.645ENSODEG00000003129CPSF310094.645Octodon_degus
ENSMODG00000014703CPSF39984.012ENSONIG00000018812cpsf39984.012Oreochromis_niloticus
ENSMODG00000014703CPSF38394.571ENSOANG00000008577CPSF310094.571Ornithorhynchus_anatinus
ENSMODG00000014703CPSF310096.093ENSOCUG00000003728CPSF310096.093Oryctolagus_cuniculus
ENSMODG00000014703CPSF39982.267ENSORLG00000018854cpsf39982.267Oryzias_latipes
ENSMODG00000014703CPSF39982.122ENSORLG00020013331cpsf39982.122Oryzias_latipes_hni
ENSMODG00000014703CPSF39982.267ENSORLG00015011017cpsf39982.267Oryzias_latipes_hsok
ENSMODG00000014703CPSF39982.413ENSOMEG00000010647cpsf39482.413Oryzias_melastigma
ENSMODG00000014703CPSF310086.252ENSOGAG00000001680CPSF310086.252Otolemur_garnettii
ENSMODG00000014703CPSF310096.382ENSOARG00000015073CPSF310096.382Ovis_aries
ENSMODG00000014703CPSF310096.093ENSPPAG00000042457CPSF310096.093Pan_paniscus
ENSMODG00000014703CPSF310096.093ENSPPRG00000016790CPSF310096.093Panthera_pardus
ENSMODG00000014703CPSF39996.070ENSPTIG00000003920CPSF310095.794Panthera_tigris_altaica
ENSMODG00000014703CPSF310096.093ENSPTRG00000011638CPSF310096.093Pan_troglodytes
ENSMODG00000014703CPSF310095.803ENSPANG00000016798CPSF310095.803Papio_anubis
ENSMODG00000014703CPSF39988.501ENSPKIG00000023646cpsf39988.190Paramormyrops_kingsleyae
ENSMODG00000014703CPSF39993.043ENSPSIG00000016144CPSF310093.043Pelodiscus_sinensis
ENSMODG00000014703CPSF36076.942ENSPMGG00000015311CPSF39976.942Periophthalmus_magnuspinnatus
ENSMODG00000014703CPSF37888.909ENSPMGG00000006141-9388.909Periophthalmus_magnuspinnatus
ENSMODG00000014703CPSF310095.514ENSPEMG00000017668Cpsf310095.514Peromyscus_maniculatus_bairdii
ENSMODG00000014703CPSF37790.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSMODG00000014703CPSF39897.774ENSPCIG00000009823CPSF39897.774Phascolarctos_cinereus
ENSMODG00000014703CPSF39983.309ENSPFOG00000015922cpsf39983.309Poecilia_formosa
ENSMODG00000014703CPSF39986.735ENSPFOG00000010418-9886.735Poecilia_formosa
ENSMODG00000014703CPSF39983.309ENSPLAG00000000882cpsf39983.309Poecilia_latipinna
ENSMODG00000014703CPSF35979.075ENSPLAG00000021300-9979.075Poecilia_latipinna
ENSMODG00000014703CPSF39983.454ENSPMEG00000018309cpsf39983.454Poecilia_mexicana
ENSMODG00000014703CPSF39981.514ENSPREG00000004482CPSF39881.514Poecilia_reticulata
ENSMODG00000014703CPSF39281.132ENSPREG00000014875cpsf39981.132Poecilia_reticulata
ENSMODG00000014703CPSF310091.606ENSPPYG00000012666CPSF310091.606Pongo_abelii
ENSMODG00000014703CPSF38583.636ENSPCAG00000015042CPSF39083.636Procavia_capensis
ENSMODG00000014703CPSF38892.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSMODG00000014703CPSF39995.936ENSPVAG00000005324CPSF39995.936Pteropus_vampyrus
ENSMODG00000014703CPSF39984.012ENSPNYG00000004405cpsf39984.012Pundamilia_nyererei
ENSMODG00000014703CPSF38387.652ENSPNYG00000021047CPSF39587.652Pundamilia_nyererei
ENSMODG00000014703CPSF39985.881ENSPNAG00000023060cpsf39885.881Pygocentrus_nattereri
ENSMODG00000014703CPSF39995.210ENSRNOG00000052418Cpsf39995.210Rattus_norvegicus
ENSMODG00000014703CPSF310090.159ENSRBIG00000041615CPSF39991.284Rhinopithecus_bieti
ENSMODG00000014703CPSF310096.093ENSRROG00000033792CPSF310096.093Rhinopithecus_roxellana
ENSMODG00000014703CPSF39340.860YLR277CYSH19540.860Saccharomyces_cerevisiae
ENSMODG00000014703CPSF310089.813ENSSBOG00000027263CPSF310089.813Saimiri_boliviensis_boliviensis
ENSMODG00000014703CPSF310097.974ENSSHAG00000007024CPSF310097.974Sarcophilus_harrisii
ENSMODG00000014703CPSF39988.517ENSSFOG00015002108cpsf39988.517Scleropages_formosus
ENSMODG00000014703CPSF39586.718ENSSMAG00000020534CPSF39586.718Scophthalmus_maximus
ENSMODG00000014703CPSF39984.157ENSSDUG00000002828cpsf39684.157Seriola_dumerili
ENSMODG00000014703CPSF39987.045ENSSDUG00000018498CPSF39887.045Seriola_dumerili
ENSMODG00000014703CPSF39984.157ENSSLDG00000008469cpsf39190.508Seriola_lalandi_dorsalis
ENSMODG00000014703CPSF39987.045ENSSLDG00000005234CPSF39887.045Seriola_lalandi_dorsalis
ENSMODG00000014703CPSF39088.390ENSSARG00000005186CPSF39188.390Sorex_araneus
ENSMODG00000014703CPSF39891.298ENSSPUG00000015525CPSF39791.298Sphenodon_punctatus
ENSMODG00000014703CPSF39987.191ENSSPAG00000002906CPSF39887.191Stegastes_partitus
ENSMODG00000014703CPSF39984.111ENSSPAG00000018579cpsf39884.111Stegastes_partitus
ENSMODG00000014703CPSF39996.232ENSSSCG00000020799CPSF39996.232Sus_scrofa
ENSMODG00000014703CPSF39993.895ENSTGUG00000013016CPSF39993.895Taeniopygia_guttata
ENSMODG00000014703CPSF35972.222ENSTRUG00000013905CPSF39972.222Takifugu_rubripes
ENSMODG00000014703CPSF39984.134ENSTRUG00000007030cpsf39784.134Takifugu_rubripes
ENSMODG00000014703CPSF38693.699ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSMODG00000014703CPSF38887.047ENSTTRG00000000861CPSF38887.047Tursiops_truncatus
ENSMODG00000014703CPSF39993.324ENSUAMG00000007535CPSF39893.324Ursus_americanus
ENSMODG00000014703CPSF39596.024ENSUMAG00000003676CPSF310096.024Ursus_maritimus
ENSMODG00000014703CPSF39393.448ENSVPAG00000008041CPSF310093.448Vicugna_pacos
ENSMODG00000014703CPSF310096.237ENSVVUG00000002194CPSF310096.237Vulpes_vulpes
ENSMODG00000014703CPSF39988.081ENSXETG00000008263cpsf39888.081Xenopus_tropicalis
ENSMODG00000014703CPSF39983.309ENSXCOG00000019695cpsf39983.309Xiphophorus_couchianus
ENSMODG00000014703CPSF35577.249ENSXCOG00000000957-8777.249Xiphophorus_couchianus
ENSMODG00000014703CPSF39986.735ENSXMAG00000027291CPSF39886.735Xiphophorus_maculatus
ENSMODG00000014703CPSF39983.309ENSXMAG00000009784cpsf39983.309Xiphophorus_maculatus

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