EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMODG00000015044 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Monodelphis_domestica
Status: putative
Strand: Plus strand
Length: 8598 bases
Position: chrUn:67501848-67510445
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMODP00000018808	LSM	PF01423.22	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMODT00000019147	-	375	-	ENSMODP00000018808	124 (aa)	-	H9H6R5

Gene Model

Click here to download ENSMODG00000015044's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMODG00000015044's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMODG00000015044	-	67	33.721	ENSMODG00000015177	LSM2	66	36.923

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMODG00000015044	-	100	95.968	ENSG00000130520	LSM4	99	95.968	Homo_sapiens
ENSMODG00000015044	-	100	95.968	ENSAMEG00000011162	LSM4	85	95.968	Ailuropoda_melanoleuca
ENSMODG00000015044	-	100	95.968	ENSANAG00000034659	LSM4	99	95.968	Aotus_nancymaae
ENSMODG00000015044	-	98	75.969	ENSACLG00000022738	lsm4	50	100.000	Astatotilapia_calliptera
ENSMODG00000015044	-	98	82.927	ENSAMXG00000016932	lsm4	86	83.607	Astyanax_mexicanus
ENSMODG00000015044	-	100	95.968	ENSBTAG00000008578	LSM4	89	95.968	Bos_taurus
ENSMODG00000015044	-	55	72.059	WBGene00003078	lsm-4	55	72.059	Caenorhabditis_elegans
ENSMODG00000015044	-	100	95.968	ENSCJAG00000014171	LSM4	99	95.968	Callithrix_jacchus
ENSMODG00000015044	-	99	95.935	ENSCAFG00000014900	LSM4	80	95.935	Canis_familiaris
ENSMODG00000015044	-	100	95.968	ENSCAFG00020012137	LSM4	89	95.968	Canis_lupus_dingo
ENSMODG00000015044	-	100	95.968	ENSCHIG00000010928	LSM4	82	95.968	Capra_hircus
ENSMODG00000015044	-	100	95.161	ENSTSYG00000030906	LSM4	99	95.161	Carlito_syrichta
ENSMODG00000015044	-	100	93.548	ENSCAPG00000014140	LSM4	89	93.548	Cavia_aperea
ENSMODG00000015044	-	100	93.548	ENSCPOG00000024117	LSM4	89	93.548	Cavia_porcellus
ENSMODG00000015044	-	100	95.968	ENSCCAG00000036308	LSM4	99	95.968	Cebus_capucinus
ENSMODG00000015044	-	100	95.968	ENSCATG00000029311	LSM4	99	95.968	Cercocebus_atys
ENSMODG00000015044	-	100	92.742	ENSCLAG00000010828	LSM4	89	92.742	Chinchilla_lanigera
ENSMODG00000015044	-	100	95.968	ENSCSAG00000005370	LSM4	89	95.968	Chlorocebus_sabaeus
ENSMODG00000015044	-	100	95.968	ENSCPBG00000012925	LSM4	89	95.968	Chrysemys_picta_bellii
ENSMODG00000015044	-	57	92.958	ENSCING00000007519	-	57	93.151	Ciona_intestinalis
ENSMODG00000015044	-	57	92.958	ENSCSAVG00000008596	-	58	93.151	Ciona_savignyi
ENSMODG00000015044	-	100	95.968	ENSCANG00000043686	LSM4	99	95.968	Colobus_angolensis_palliatus
ENSMODG00000015044	-	100	93.548	ENSCGRG00001014436	Lsm4	89	93.548	Cricetulus_griseus_chok1gshd
ENSMODG00000015044	-	100	93.548	ENSCGRG00000009398	Lsm4	90	93.548	Cricetulus_griseus_crigri
ENSMODG00000015044	-	66	96.341	ENSCSEG00000016127	lsm4	86	76.230	Cynoglossus_semilaevis
ENSMODG00000015044	-	98	76.000	ENSCVAG00000010601	lsm4	51	98.630	Cyprinodon_variegatus
ENSMODG00000015044	-	98	76.000	ENSCVAG00000021828	lsm4	56	98.630	Cyprinodon_variegatus
ENSMODG00000015044	-	97	78.571	ENSDARG00000023852	lsm4	57	100.000	Danio_rerio
ENSMODG00000015044	-	100	94.355	ENSDORG00000024225	Lsm4	89	94.355	Dipodomys_ordii
ENSMODG00000015044	-	100	95.968	ENSETEG00000007762	-	100	95.968	Echinops_telfairi
ENSMODG00000015044	-	100	95.968	ENSECAG00000010141	LSM4	51	95.968	Equus_caballus
ENSMODG00000015044	-	95	84.167	ENSELUG00000012821	lsm4	89	82.203	Esox_lucius
ENSMODG00000015044	-	100	95.968	ENSFCAG00000040580	LSM4	99	95.968	Felis_catus
ENSMODG00000015044	-	100	95.968	ENSFALG00000009478	LSM4	89	95.968	Ficedula_albicollis
ENSMODG00000015044	-	100	93.548	ENSFDAG00000010124	LSM4	90	93.548	Fukomys_damarensis
ENSMODG00000015044	-	66	97.561	ENSGMOG00000007729	lsm4	50	100.000	Gadus_morhua
ENSMODG00000015044	-	100	95.968	ENSGALG00000003385	LSM4	89	95.968	Gallus_gallus
ENSMODG00000015044	-	98	83.200	ENSGAFG00000004903	lsm4	55	95.890	Gambusia_affinis
ENSMODG00000015044	-	100	95.968	ENSGAGG00000017812	LSM4	89	95.968	Gopherus_agassizii
ENSMODG00000015044	-	100	95.968	ENSGGOG00000012914	-	99	95.968	Gorilla_gorilla
ENSMODG00000015044	-	98	77.344	ENSHBUG00000008858	lsm4	53	95.745	Haplochromis_burtoni
ENSMODG00000015044	-	100	92.742	ENSHGLG00000006568	LSM4	89	92.742	Heterocephalus_glaber_female
ENSMODG00000015044	-	63	97.436	ENSHGLG00100007894	LSM4	84	97.436	Heterocephalus_glaber_male
ENSMODG00000015044	-	98	75.410	ENSHCOG00000008819	lsm4	51	100.000	Hippocampus_comes
ENSMODG00000015044	-	98	82.927	ENSIPUG00000005368	Lsm4	51	100.000	Ictalurus_punctatus
ENSMODG00000015044	-	100	95.968	ENSSTOG00000016494	LSM4	89	95.968	Ictidomys_tridecemlineatus
ENSMODG00000015044	-	100	93.548	ENSJJAG00000017420	Lsm4	89	93.548	Jaculus_jaculus
ENSMODG00000015044	-	57	98.592	ENSKMAG00000005073	lsm4	51	98.630	Kryptolebias_marmoratus
ENSMODG00000015044	-	98	83.607	ENSLACG00000015861	LSM4	87	83.607	Latimeria_chalumnae
ENSMODG00000015044	-	92	83.333	ENSLOCG00000002025	lsm4	52	98.630	Lepisosteus_oculatus
ENSMODG00000015044	-	100	95.968	ENSLAFG00000017459	LSM4	89	95.968	Loxodonta_africana
ENSMODG00000015044	-	100	95.968	ENSMFAG00000031194	LSM4	99	95.968	Macaca_fascicularis
ENSMODG00000015044	-	100	95.968	ENSMMUG00000004405	LSM4	99	95.968	Macaca_mulatta
ENSMODG00000015044	-	100	95.968	ENSMNEG00000042899	LSM4	99	95.968	Macaca_nemestrina
ENSMODG00000015044	-	100	95.968	ENSMLEG00000027948	LSM4	99	95.968	Mandrillus_leucophaeus
ENSMODG00000015044	-	98	78.862	ENSMAMG00000006190	lsm4	86	76.230	Mastacembelus_armatus
ENSMODG00000015044	-	98	76.562	ENSMZEG00005016420	lsm4	50	100.000	Maylandia_zebra
ENSMODG00000015044	-	100	83.200	ENSMGAG00000004976	LSM4	89	91.129	Meleagris_gallopavo
ENSMODG00000015044	-	100	95.161	ENSMICG00000000222	LSM4	99	95.161	Microcebus_murinus
ENSMODG00000015044	-	100	93.548	ENSMOCG00000020861	Lsm4	89	93.548	Microtus_ochrogaster
ENSMODG00000015044	-	98	75.200	ENSMALG00000018159	lsm4	51	98.630	Monopterus_albus
ENSMODG00000015044	-	100	93.548	MGP_CAROLIEiJ_G0031158	Lsm4	89	93.548	Mus_caroli
ENSMODG00000015044	-	100	93.548	ENSMUSG00000031848	Lsm4	89	93.548	Mus_musculus
ENSMODG00000015044	-	100	93.548	MGP_PahariEiJ_G0021623	Lsm4	89	93.548	Mus_pahari
ENSMODG00000015044	-	100	93.548	MGP_SPRETEiJ_G0032276	Lsm4	89	93.548	Mus_spretus
ENSMODG00000015044	-	100	95.968	ENSMPUG00000015589	LSM4	89	95.968	Mustela_putorius_furo
ENSMODG00000015044	-	100	95.968	ENSMLUG00000004010	LSM4	89	95.968	Myotis_lucifugus
ENSMODG00000015044	-	100	93.548	ENSNGAG00000008644	Lsm4	93	93.548	Nannospalax_galili
ENSMODG00000015044	-	75	95.745	ENSNBRG00000022150	lsm4	58	95.745	Neolamprologus_brichardi
ENSMODG00000015044	-	100	94.355	ENSMEUG00000013229	LSM4	100	94.355	Notamacropus_eugenii
ENSMODG00000015044	-	100	89.516	ENSOPRG00000005575	LSM4	100	80.645	Ochotona_princeps
ENSMODG00000015044	-	100	82.258	ENSODEG00000004519	-	89	70.968	Octodon_degus
ENSMODG00000015044	-	100	66.935	ENSODEG00000011712	-	86	66.935	Octodon_degus
ENSMODG00000015044	-	100	93.548	ENSODEG00000020549	-	89	93.548	Octodon_degus
ENSMODG00000015044	-	98	75.969	ENSONIG00000012724	lsm4	50	100.000	Oreochromis_niloticus
ENSMODG00000015044	-	78	96.907	ENSOANG00000007434	LSM4	84	96.907	Ornithorhynchus_anatinus
ENSMODG00000015044	-	100	77.419	ENSORLG00000008391	lsm4	51	98.630	Oryzias_latipes
ENSMODG00000015044	-	100	77.419	ENSORLG00020014829	lsm4	51	98.630	Oryzias_latipes_hni
ENSMODG00000015044	-	100	77.419	ENSORLG00015010205	lsm4	51	98.630	Oryzias_latipes_hsok
ENSMODG00000015044	-	100	77.419	ENSOMEG00000003606	lsm4	51	98.630	Oryzias_melastigma
ENSMODG00000015044	-	69	96.471	ENSOGAG00000027992	LSM4	50	98.630	Otolemur_garnettii
ENSMODG00000015044	-	59	98.630	ENSOARG00000012553	LSM4	57	98.630	Ovis_aries
ENSMODG00000015044	-	100	95.968	ENSPPAG00000044045	-	99	95.968	Pan_paniscus
ENSMODG00000015044	-	100	95.968	ENSPPRG00000018264	LSM4	99	95.968	Panthera_pardus
ENSMODG00000015044	-	100	95.968	ENSPTIG00000006306	LSM4	90	95.968	Panthera_tigris_altaica
ENSMODG00000015044	-	100	95.968	ENSPTRG00000031470	LSM4	99	95.968	Pan_troglodytes
ENSMODG00000015044	-	100	95.968	ENSPANG00000014399	LSM4	99	95.968	Papio_anubis
ENSMODG00000015044	-	98	81.148	ENSPKIG00000006154	lsm4	57	100.000	Paramormyrops_kingsleyae
ENSMODG00000015044	-	100	91.129	ENSPSIG00000012358	LSM4	90	79.032	Pelodiscus_sinensis
ENSMODG00000015044	-	100	93.548	ENSPEMG00000001358	Lsm4	89	93.548	Peromyscus_maniculatus_bairdii
ENSMODG00000015044	-	98	79.200	ENSPLAG00000016267	lsm4	51	100.000	Poecilia_latipinna
ENSMODG00000015044	-	98	78.400	ENSPMEG00000016378	lsm4	53	100.000	Poecilia_mexicana
ENSMODG00000015044	-	100	95.968	ENSPPYG00000009736	LSM4	89	95.968	Pongo_abelii
ENSMODG00000015044	-	100	95.968	ENSPCAG00000008513	LSM4	100	95.968	Procavia_capensis
ENSMODG00000015044	-	100	95.161	ENSPCOG00000019837	LSM4	99	95.161	Propithecus_coquereli
ENSMODG00000015044	-	100	95.968	ENSPVAG00000015383	LSM4	89	95.968	Pteropus_vampyrus
ENSMODG00000015044	-	98	76.562	ENSPNYG00000016794	lsm4	50	100.000	Pundamilia_nyererei
ENSMODG00000015044	-	96	82.500	ENSPNAG00000016598	lsm4	54	100.000	Pygocentrus_nattereri
ENSMODG00000015044	-	100	93.548	ENSRNOG00000019572	Lsm4	89	93.548	Rattus_norvegicus
ENSMODG00000015044	-	100	95.968	ENSRBIG00000024717	LSM4	99	95.968	Rhinopithecus_bieti
ENSMODG00000015044	-	100	95.968	ENSRROG00000045706	LSM4	99	95.968	Rhinopithecus_roxellana
ENSMODG00000015044	-	100	95.968	ENSSBOG00000022455	LSM4	99	95.968	Saimiri_boliviensis_boliviensis
ENSMODG00000015044	-	100	100.000	ENSSHAG00000011559	LSM4	89	100.000	Sarcophilus_harrisii
ENSMODG00000015044	-	98	79.508	ENSSFOG00015021067	lsm4	52	100.000	Scleropages_formosus
ENSMODG00000015044	-	100	95.968	ENSSSCG00000034314	LSM4	89	95.968	Sus_scrofa
ENSMODG00000015044	-	98	76.800	ENSTRUG00000021737	lsm4	51	97.260	Takifugu_rubripes
ENSMODG00000015044	-	98	80.000	ENSTNIG00000010191	lsm4	51	98.630	Tetraodon_nigroviridis
ENSMODG00000015044	-	100	95.968	ENSUAMG00000000665	LSM4	89	95.968	Ursus_americanus
ENSMODG00000015044	-	100	95.968	ENSUMAG00000009013	LSM4	89	95.968	Ursus_maritimus
ENSMODG00000015044	-	100	95.968	ENSVVUG00000008136	LSM4	64	95.968	Vulpes_vulpes
ENSMODG00000015044	-	100	92.742	ENSXETG00000024933	lsm4	89	76.613	Xenopus_tropicalis